RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A GDE1Q02979 1223 aa4.43□□□□□ -1.7
VMA10YHR039C-A TIF35Q04067 274 aaKnown RBP4.43□□□□□ -1.7
VMA10YHR039C-A BRE4Q07660 1125 aa4.43□□□□□ -1.7
VMA10YHR039C-A TRP2P00899 507 aaKnown RBP4.42□□□□□ -1.7
VMA10YHR039C-A LYP1P32487 611 aa4.42□□□□□ -1.7
VMA10YHR039C-A MAC1P35192 417 aa4.42□□□□□ -1.7
VMA10YHR039C-A RGD1P38339 666 aa4.42□□□□□ -1.7
VMA10YHR039C-A YHL012WP38709 493 aa4.42□□□□□ -1.7
VMA10YHR039C-A TAT2P38967 592 aa4.42□□□□□ -1.7
VMA10YHR039C-A MPH1P40562 993 aa4.42□□□□□ -1.7
VMA10YHR039C-A TYW3P53177 273 aa4.42□□□□□ -1.7
VMA10YHR039C-A SSY1Q03770 852 aa4.42□□□□□ -1.7
VMA10YHR039C-A AOS1Q06624 347 aa4.42□□□□□ -1.7
VMA10YHR039C-A YPL260WQ08977 551 aa4.42□□□□□ -1.7
VMA10YHR039C-A SPO21Q12411 609 aa4.42□□□□□ -1.7
VMA10YHR039C-A YER152CP10356 443 aa4.41□□□□□ -1.7
VMA10YHR039C-A LIP5P32875 414 aa4.41□□□□□ -1.7
VMA10YHR039C-A MCM7P38132 845 aa4.41□□□□□ -1.7
VMA10YHR039C-A GTS1P40956 396 aa4.41□□□□□ -1.7
VMA10YHR039C-A HOS3Q02959 697 aaKnown RBP4.41□□□□□ -1.7
VMA10YHR039C-A RCL1Q08096 367 aaPredicted RBP4.41□□□□□ -1.7
VMA10YHR039C-A PUF4P25339 888 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
VMA10YHR039C-A ADP1P25371 1049 aa4.4□□□□□ -1.71
VMA10YHR039C-A GRX1P25373 110 aaKnown RBP4.4□□□□□ -1.71
VMA10YHR039C-A PRO1P32264 428 aa4.4□□□□□ -1.71
VMA10YHR039C-A MDL2P33311 773 aa4.4□□□□□ -1.71
VMA10YHR039C-A MOT2P34909 587 aaKnown RBP4.4□□□□□ -1.71
VMA10YHR039C-A PTC7P38797 343 aa4.4□□□□□ -1.71
VMA10YHR039C-A NSE3Q05541 303 aa4.4□□□□□ -1.71
VMA10YHR039C-A OPI10Q08202 246 aa4.4□□□□□ -1.71
VMA10YHR039C-A SRO9P25567 434 aaKnown RBP4.39□□□□□ -1.71
VMA10YHR039C-A SRP40P32583 406 aaPredicted RBP4.39□□□□□ -1.71
VMA10YHR039C-A RPN3P40016 523 aaKnown RBP4.39□□□□□ -1.71
VMA10YHR039C-A HNT2P49775 206 aa4.39□□□□□ -1.71
VMA10YHR039C-A TNA1P53322 534 aa4.39□□□□□ -1.71
VMA10YHR039C-A YLR225CQ05948 407 aaKnown RBP4.39□□□□□ -1.71
VMA10YHR039C-A INO1P11986 533 aa4.38□□□□□ -1.71
VMA10YHR039C-A STI1P15705 589 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
VMA10YHR039C-A SNF5P18480 905 aa4.38□□□□□ -1.71
VMA10YHR039C-A PRI2P20457 528 aa4.38□□□□□ -1.71
VMA10YHR039C-A BAP2P38084 609 aa4.38□□□□□ -1.71
VMA10YHR039C-A NMD2P38798 1089 aaKnown RBP4.38□□□□□ -1.71
VMA10YHR039C-A SPF1P39986 1215 aaKnown RBP4.38□□□□□ -1.71
VMA10YHR039C-A YFL054CP43549 646 aa4.38□□□□□ -1.71
VMA10YHR039C-A SPO20Q04359 397 aa4.38□□□□□ -1.71
VMA10YHR039C-A ESC2Q06340 456 aa4.38□□□□□ -1.71
VMA10YHR039C-A BDF2Q07442 638 aa4.38□□□□□ -1.71
VMA10YHR039C-A RSC58Q07979 502 aa4.38□□□□□ -1.71
VMA10YHR039C-A GNT1Q12096 491 aa4.38□□□□□ -1.71
VMA10YHR039C-A FAL1Q12099 399 aaKnown RBP4.38□□□□□ -1.71
VMA10YHR039C-A YPL066WQ12194 479 aa4.38□□□□□ -1.71
VMA10YHR039C-A LPX1Q12405 387 aaKnown RBP4.38□□□□□ -1.71
VMA10YHR039C-A COQ4O13525 335 aa4.37□□□□□ -1.71
VMA10YHR039C-A BAS1P22035 811 aa4.37□□□□□ -1.71
VMA10YHR039C-A ABD1P32783 436 aaPredicted RBP4.37□□□□□ -1.71
VMA10YHR039C-A YKL091CP33324 310 aaKnown RBP4.37□□□□□ -1.71
VMA10YHR039C-A HSP78P33416 811 aa4.37□□□□□ -1.71
VMA10YHR039C-A YKL069WP36088 180 aa4.37□□□□□ -1.71
VMA10YHR039C-A NRD1P53617 575 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VMA10YHR039C-A DOS2P54858 310 aa4.37□□□□□ -1.71
VMA10YHR039C-A RPN4Q03465 531 aa4.37□□□□□ -1.71
VMA10YHR039C-A TDA5Q06417 326 aaKnown RBP4.37□□□□□ -1.71
VMA10YHR039C-A RKM4Q12504 494 aa4.37□□□□□ -1.71
VMA10YHR039C-A CIT2P08679 460 aa4.36□□□□□ -1.71
VMA10YHR039C-A AIM26P32858 118 aa4.36□□□□□ -1.71
VMA10YHR039C-A BUD6P41697 788 aa4.36□□□□□ -1.71
VMA10YHR039C-A YGL176CP46945 554 aa4.36□□□□□ -1.71
VMA10YHR039C-A RNH70P53331 553 aa4.36□□□□□ -1.71
VMA10YHR039C-A ORC3P54790 616 aa4.36□□□□□ -1.71
VMA10YHR039C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
VMA10YHR039C-A CDC53Q12018 815 aaKnown RBP4.36□□□□□ -1.71
VMA10YHR039C-A RPL11AP0C0W9 174 aaKnown RBP4.35□□□□□ -1.71
VMA10YHR039C-A RAD4P14736 754 aa4.35□□□□□ -1.71
VMA10YHR039C-A DBP2P24783 546 aaKnown RBP4.35□□□□□ -1.71
VMA10YHR039C-A YKL107WP34251 309 aa4.35□□□□□ -1.71
VMA10YHR039C-A LRG1P35688 1017 aa4.35□□□□□ -1.71
VMA10YHR039C-A BRN1P38170 754 aa4.35□□□□□ -1.71
VMA10YHR039C-A CCZ1P38273 704 aa4.35□□□□□ -1.71
VMA10YHR039C-A PIK1P39104 1066 aa4.35□□□□□ -1.71
VMA10YHR039C-A MXR1P40029 184 aa4.35□□□□□ -1.71
VMA10YHR039C-A SPP382Q06411 708 aaPredicted RBP4.35□□□□□ -1.71
VMA10YHR039C-A NBA1Q08229 501 aaKnown RBP4.35□□□□□ -1.71
VMA10YHR039C-A RPL11BQ3E757 174 aaPredicted RBP4.35□□□□□ -1.71
VMA10YHR039C-A AGP1P25376 633 aa4.34□□□□□ -1.71
VMA10YHR039C-A SPC42P36094 363 aa4.34□□□□□ -1.71
VMA10YHR039C-A POL12P38121 705 aaPredicted RBP4.34□□□□□ -1.71
VMA10YHR039C-A PNT1P38969 423 aa4.34□□□□□ -1.71
VMA10YHR039C-A HUL5P53119 910 aa4.34□□□□□ -1.71
VMA10YHR039C-A NAN1Q02931 896 aaKnown RBP4.34□□□□□ -1.71
VMA10YHR039C-A RSB1Q08417 382 aa4.34□□□□□ -1.71
VMA10YHR039C-A SPS1P08458 490 aa4.33□□□□□ -1.72
VMA10YHR039C-A SBA1P28707 216 aaKnown RBP4.33□□□□□ -1.72
VMA10YHR039C-A PIN4P34217 668 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
VMA10YHR039C-A VBA5P36172 582 aa4.33□□□□□ -1.72
VMA10YHR039C-A UGA2P38067 497 aa4.33□□□□□ -1.72
VMA10YHR039C-A PBP2P38151 413 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
VMA10YHR039C-A MBP1P39678 833 aa4.33□□□□□ -1.72
VMA10YHR039C-A SIP5P40210 489 aaKnown RBP4.33□□□□□ -1.72
VMA10YHR039C-A KRI1P42846 591 aaKnown RBP4.33□□□□□ -1.72
VMA10YHR039C-A OSW7P43611 510 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms