RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	AOS1	Q06624	347 aa		5.03	□□□□□ -1.6
VMA21	YGR105W	RSC58	Q07979	502 aa		5.03	□□□□□ -1.6
VMA21	YGR105W	TMA46	Q12000	345 aa	Known RBP	5.03	□□□□□ -1.6
VMA21	YGR105W	COQ4	O13525	335 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	MNR2	P35724	969 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	MCM7	P38132	845 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	YFL054C	P43549	646 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	ECL1	P48235	211 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	EEB1	Q02891	456 aa		5.02	□□□□□ -1.61
VMA21	YGR105W	SNF5	P18480	905 aa		5.01	□□□□□ -1.61
VMA21	YGR105W	RNQ1	P25367	405 aa		5.01	□□□□□ -1.61
VMA21	YGR105W	RPN3	P40016	523 aa	Known RBP	5.01	□□□□□ -1.61
VMA21	YGR105W	MPH1	P40562	993 aa		5.01	□□□□□ -1.61
VMA21	YGR105W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
VMA21	YGR105W	TRP2	P00899	507 aa	Known RBP	5	□□□□□ -1.61
VMA21	YGR105W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
VMA21	YGR105W	BAP2	P38084	609 aa		5	□□□□□ -1.61
VMA21	YGR105W	CCZ1	P38273	704 aa		5	□□□□□ -1.61
VMA21	YGR105W	ETP1	P38748	585 aa	Known RBP	5	□□□□□ -1.61
VMA21	YGR105W	JIP5	Q06214	492 aa	Predicted RBP	5	□□□□□ -1.61
VMA21	YGR105W	NBA1	Q08229	501 aa	Known RBP	5	□□□□□ -1.61
VMA21	YGR105W	SPS1	P08458	490 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	GAS1	P22146	559 aa	Known RBP	4.99	□□□□□ -1.61
VMA21	YGR105W	LYP1	P32487	611 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	MOT2	P34909	587 aa	Known RBP	4.99	□□□□□ -1.61
VMA21	YGR105W	PIK1	P39104	1066 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	MET10	P39692	1035 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	FAA4	P47912	694 aa	Known RBP	4.99	□□□□□ -1.61
VMA21	YGR105W	HNT2	P49775	206 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	FOL2	P51601	243 aa	Known RBP	4.99	□□□□□ -1.61
VMA21	YGR105W	TYW3	P53177	273 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	RSB1	Q08417	382 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	YDL177C	Q12257	170 aa		4.99	□□□□□ -1.61
VMA21	YGR105W	ELM1	P32801	640 aa		4.98	□□□□□ -1.61
VMA21	YGR105W	IRC24	P40580	263 aa		4.98	□□□□□ -1.61
VMA21	YGR105W	MAD1	P40957	749 aa		4.98	□□□□□ -1.61
VMA21	YGR105W	SNU71	P53207	620 aa	Known RBP	4.98	□□□□□ -1.61
VMA21	YGR105W	GDE1	Q02979	1223 aa		4.98	□□□□□ -1.61
VMA21	YGR105W	INO1	P11986	533 aa		4.97	□□□□□ -1.61
VMA21	YGR105W	MXR1	P40029	184 aa		4.97	□□□□□ -1.61
VMA21	YGR105W	YGR053C	P53234	283 aa		4.97	□□□□□ -1.61
VMA21	YGR105W	CWC24	P53769	259 aa		4.97	□□□□□ -1.61
VMA21	YGR105W	YLR225C	Q05948	407 aa	Known RBP	4.97	□□□□□ -1.61
VMA21	YGR105W	VPS16	Q03308	798 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	SVF1	Q05515	481 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	ESC2	Q06340	456 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	CDA2	Q06703	312 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	GNT1	Q12096	491 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	YPL066W	Q12194	479 aa		4.96	□□□□□ -1.62
VMA21	YGR105W	RPL11A	P0C0W9	174 aa	Known RBP	4.95	□□□□□ -1.62
VMA21	YGR105W	CLN2	P20438	545 aa		4.95	□□□□□ -1.62
VMA21	YGR105W	DBP2	P24783	546 aa	Known RBP	4.95	□□□□□ -1.62
VMA21	YGR105W	TSA1	P34760	196 aa	Known RBP	4.95	□□□□□ -1.62
VMA21	YGR105W	ABZ1	P37254	787 aa	Predicted RBP	4.95	□□□□□ -1.62
VMA21	YGR105W	MRPL22	P53881	309 aa		4.95	□□□□□ -1.62
VMA21	YGR105W	PIN2	Q12057	282 aa		4.95	□□□□□ -1.62
VMA21	YGR105W	RPL11B	Q3E757	174 aa	Predicted RBP	4.95	□□□□□ -1.62
VMA21	YGR105W	BAS1	P22035	811 aa		4.94	□□□□□ -1.62
VMA21	YGR105W	NIT1	P40447	199 aa		4.94	□□□□□ -1.62
VMA21	YGR105W	SEC26	P41810	973 aa	Known RBP	4.94	□□□□□ -1.62
VMA21	YGR105W	YGL176C	P46945	554 aa		4.94	□□□□□ -1.62
VMA21	YGR105W	PRP43	P53131	767 aa	Known RBP	4.94	□□□□□ -1.62
VMA21	YGR105W	SPO20	Q04359	397 aa		4.94	□□□□□ -1.62
VMA21	YGR105W	SPP382	Q06411	708 aa	Predicted RBP	4.94	□□□□□ -1.62
VMA21	YGR105W	NAP1	P25293	417 aa	Known RBP	4.93	□□□□□ -1.62
VMA21	YGR105W	ABD1	P32783	436 aa	Predicted RBP	4.93	□□□□□ -1.62
VMA21	YGR105W	YKL107W	P34251	309 aa		4.93	□□□□□ -1.62
VMA21	YGR105W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
VMA21	YGR105W	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
VMA21	YGR105W	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
VMA21	YGR105W	UGA2	P38067	497 aa		4.92	□□□□□ -1.62
VMA21	YGR105W	AIM3	P38266	947 aa	Known RBP	4.92	□□□□□ -1.62
VMA21	YGR105W	PNT1	P38969	423 aa		4.92	□□□□□ -1.62
VMA21	YGR105W	UBP5	P39944	805 aa		4.92	□□□□□ -1.62
VMA21	YGR105W	FAL1	Q12099	399 aa	Known RBP	4.92	□□□□□ -1.62
VMA21	YGR105W	PRI2	P20457	528 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	RFC5	P38251	354 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	VAC8	P39968	578 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	SIP5	P40210	489 aa	Known RBP	4.91	□□□□□ -1.62
VMA21	YGR105W	SNO2	P53823	222 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	ALD6	P54115	500 aa	Known RBP	4.91	□□□□□ -1.62
VMA21	YGR105W	ACM1	Q08981	209 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	SVS1	Q12254	260 aa		4.91	□□□□□ -1.62
VMA21	YGR105W	CYC1	P00044	109 aa	Predicted RBP	4.9	□□□□□ -1.63
VMA21	YGR105W	SLA2	P33338	968 aa		4.9	□□□□□ -1.63
VMA21	YGR105W	GEM1	P39722	662 aa		4.9	□□□□□ -1.63
VMA21	YGR105W	RSM24	Q03976	319 aa		4.9	□□□□□ -1.63
VMA21	YGR105W	BI4	P03879	638 aa		4.89	□□□□□ -1.63
VMA21	YGR105W	YKL069W	P36088	180 aa		4.89	□□□□□ -1.63
VMA21	YGR105W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
VMA21	YGR105W	OPI10	Q08202	246 aa		4.89	□□□□□ -1.63
VMA21	YGR105W	CMP2	P14747	604 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	PRP6	P19735	899 aa	Predicted RBP	4.88	□□□□□ -1.63
VMA21	YGR105W	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	APL1	P27351	700 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	THI80	P35202	319 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	MBP1	P39678	833 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	ROT1	Q03691	256 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	SGD1	Q06132	899 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	YOR352W	Q08816	343 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms