RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeast

Gene VPS60, Length 690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS60	YDR486C	BMH1	P29311	267 aa	Known RBP	12.06	□□□□□ -0.48
VPS60	YDR486C	MOT2	P34909	587 aa	Known RBP	12.06	□□□□□ -0.48
VPS60	YDR486C	ERG7	P38604	731 aa		12.06	□□□□□ -0.48
VPS60	YDR486C	ORC4	P54791	529 aa		12.06	□□□□□ -0.48
VPS60	YDR486C	GSY1	P23337	708 aa		12.05	□□□□□ -0.48
VPS60	YDR486C	PKC1	P24583	1151 aa		12.05	□□□□□ -0.48
VPS60	YDR486C	EUG1	P32474	517 aa		12.05	□□□□□ -0.48
VPS60	YDR486C	MCR1	P36060	302 aa	Known RBP	12.05	□□□□□ -0.48
VPS60	YDR486C	BUL2	Q03758	920 aa	Known RBP	12.05	□□□□□ -0.48
VPS60	YDR486C	WHI4	Q07655	649 aa	Known RBP	12.05	□□□□□ -0.48
VPS60	YDR486C	ILV1	P00927	576 aa	Known RBP	12.04	□□□□□ -0.48
VPS60	YDR486C	SES1	P07284	462 aa	Known RBP	12.04	□□□□□ -0.48
VPS60	YDR486C	RKM3	P38222	552 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	RSC30	P38781	883 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	SPR3	P41901	512 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	CTR1	P49573	406 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	UBA2	P52488	636 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	MFM1	Q02783	413 aa		12.04	□□□□□ -0.48
VPS60	YDR486C	CDC19	P00549	500 aa	Known RBP	12.03	□□□□□ -0.48
VPS60	YDR486C	RPL22A	P05749	121 aa	Known RBP	12.03	□□□□□ -0.48
VPS60	YDR486C	ISW1	P38144	1129 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	THI6	P41835	540 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	RSC1	P53236	928 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	YGR125W	P53273	1036 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	YAF9	P53930	226 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	PTA1	Q01329	785 aa	Predicted RBP	12.03	□□□□□ -0.48
VPS60	YDR486C	ADY4	Q05955	493 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	SGD1	Q06132	899 aa		12.03	□□□□□ -0.48
VPS60	YDR486C	CDC15	P27636	974 aa		12.02	□□□□□ -0.49
VPS60	YDR486C	ISA1	Q07821	250 aa	Predicted RBP	12.02	□□□□□ -0.49
VPS60	YDR486C	PSR2	Q07949	397 aa		12.02	□□□□□ -0.49
VPS60	YDR486C	TIF6	Q12522	245 aa	Known RBP	12.02	□□□□□ -0.49
VPS60	YDR486C	SMC6	Q12749	1114 aa		12.02	□□□□□ -0.49
VPS60	YDR486C	TY1B-A	O13527	1196 aa	Known RBP	12.01	□□□□□ -0.49
VPS60	YDR486C	HIR1	P32479	840 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	SRP40	P32583	406 aa	Predicted RBP	12.01	□□□□□ -0.49
VPS60	YDR486C	PET10	P36139	283 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	CBK1	P53894	756 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	DUS4	Q06063	367 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	YLH47	Q06493	454 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	ERP3	Q12403	225 aa		12.01	□□□□□ -0.49
VPS60	YDR486C	FOB1	O13329	566 aa		12	□□□□□ -0.49
VPS60	YDR486C	UBP11	P36026	717 aa		12	□□□□□ -0.49
VPS60	YDR486C	VPS29	P38759	282 aa		12	□□□□□ -0.49
VPS60	YDR486C	RRM3	P38766	723 aa		12	□□□□□ -0.49
VPS60	YDR486C	FYV10	P40492	516 aa		12	□□□□□ -0.49
VPS60	YDR486C	BRE2	P43132	505 aa		12	□□□□□ -0.49
VPS60	YDR486C	YGL039W	P53183	348 aa	Known RBP	12	□□□□□ -0.49
VPS60	YDR486C	TY3A-G	Q12173	290 aa		12	□□□□□ -0.49
VPS60	YDR486C	TY3A-I	Q99219	290 aa		12	□□□□□ -0.49
VPS60	YDR486C	YEL076C-A	P0CX16	216 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	YLR464W	P0CX17	216 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	ATE1	P16639	503 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	CKA2	P19454	339 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	ESS1	P22696	170 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	TKL1	P23254	680 aa	Known RBP	11.99	□□□□□ -0.49
VPS60	YDR486C	GSY2	P27472	705 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	SAC6	P32599	642 aa	Known RBP	11.99	□□□□□ -0.49
VPS60	YDR486C	YEL076C	P39971	216 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	ROG3	P43602	733 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	SSL2	Q00578	843 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	SLD5	Q03406	294 aa		11.99	□□□□□ -0.49
VPS60	YDR486C	REG2	P38232	338 aa		11.98	□□□□□ -0.49
VPS60	YDR486C	GPD2	P41911	440 aa	Known RBP	11.98	□□□□□ -0.49
VPS60	YDR486C	VTC2	P43585	828 aa		11.98	□□□□□ -0.49
VPS60	YDR486C	DIP5	P53388	608 aa		11.98	□□□□□ -0.49
VPS60	YDR486C	CNM67	P53865	581 aa	Known RBP	11.98	□□□□□ -0.49
VPS60	YDR486C	PGA2	P53903	129 aa		11.98	□□□□□ -0.49
VPS60	YDR486C	LCD1	Q04377	747 aa		11.98	□□□□□ -0.49
VPS60	YDR486C	YLR225C	Q05948	407 aa	Known RBP	11.98	□□□□□ -0.49
VPS60	YDR486C	FKS1	P38631	1876 aa	Known RBP	11.97	□□□□□ -0.49
VPS60	YDR486C	ISY1	P21374	235 aa	Predicted RBP	11.97	□□□□□ -0.49
VPS60	YDR486C	CLB5	P30283	435 aa		11.97	□□□□□ -0.49
VPS60	YDR486C	PGM1	P33401	570 aa	Known RBP	11.97	□□□□□ -0.49
VPS60	YDR486C	PHM6	Q05637	104 aa		11.97	□□□□□ -0.49
VPS60	YDR486C	FUS2	Q05670	677 aa		11.97	□□□□□ -0.49
VPS60	YDR486C	PGK1	P00560	416 aa	Known RBP	11.96	□□□□□ -0.49
VPS60	YDR486C	SUP45	P12385	437 aa	Known RBP	11.96	□□□□□ -0.49
VPS60	YDR486C	SUV3	P32580	737 aa		11.96	□□□□□ -0.49
VPS60	YDR486C	DBP7	P36120	742 aa	Known RBP	11.96	□□□□□ -0.49
VPS60	YDR486C	NOC2	P39744	710 aa	Known RBP	11.96	□□□□□ -0.49
VPS60	YDR486C	ATG1	P53104	897 aa		11.96	□□□□□ -0.49
VPS60	YDR486C	DUS1	P53759	423 aa	Known RBP	11.96	□□□□□ -0.49
VPS60	YDR486C	TFC8	Q12308	588 aa		11.96	□□□□□ -0.49
VPS60	YDR486C	MIP1	P15801	1254 aa		11.95	□□□□□ -0.5
VPS60	YDR486C	PIH1	P38768	344 aa		11.95	□□□□□ -0.5
VPS60	YDR486C	YMR321C	Q04898	105 aa		11.95	□□□□□ -0.5
VPS60	YDR486C	TAF13	P11747	167 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	CLN3	P13365	580 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	RAM2	P29703	316 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	SIP3	P38717	1229 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	ULP2	P40537	1034 aa	Predicted RBP	11.94	□□□□□ -0.5
VPS60	YDR486C	GUP1	P53154	560 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	CRD1	Q07560	283 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	AFT2	Q08957	416 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	SRF1	Q12516	437 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	YDR461C-A	Q2V2P7	80 aa		11.94	□□□□□ -0.5
VPS60	YDR486C	PRP22	P24384	1145 aa	Known RBP	11.93	□□□□□ -0.5
VPS60	YDR486C	SEC8	P32855	1065 aa		11.93	□□□□□ -0.5
VPS60	YDR486C	TFC4	P33339	1025 aa		11.93	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms