RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C REC8Q12188 680 aa6.17□□□□□ -1.42
RPB7YDR404C CHS2P14180 963 aa6.16□□□□□ -1.42
RPB7YDR404C PPG1P32838 368 aa6.16□□□□□ -1.42
RPB7YDR404C SAF1P38352 637 aa6.16□□□□□ -1.42
RPB7YDR404C RIM11P38615 370 aa6.16□□□□□ -1.42
RPB7YDR404C ALO1P54783 526 aaKnown RBP6.16□□□□□ -1.42
RPB7YDR404C RPN4Q03465 531 aa6.16□□□□□ -1.42
RPB7YDR404C BDF2Q07442 638 aa6.16□□□□□ -1.42
RPB7YDR404C YLL054CQ12244 843 aa6.16□□□□□ -1.42
RPB7YDR404C MLP2P40457 1679 aa6.16□□□□□ -1.42
RPB7YDR404C ERS1P17261 260 aa6.15□□□□□ -1.42
RPB7YDR404C NPR1P22211 790 aa6.15□□□□□ -1.42
RPB7YDR404C SQT1P35184 431 aa6.15□□□□□ -1.42
RPB7YDR404C XKS1P42826 600 aa6.15□□□□□ -1.42
RPB7YDR404C OSW7P43611 510 aa6.15□□□□□ -1.42
RPB7YDR404C RSM26P47141 266 aa6.15□□□□□ -1.42
RPB7YDR404C CMR1Q12510 522 aaKnown RBP6.15□□□□□ -1.42
RPB7YDR404C NUP157P40064 1391 aaKnown RBP6.15□□□□□ -1.43
RPB7YDR404C NAM7P30771 971 aaKnown RBP6.14□□□□□ -1.43
RPB7YDR404C YKL069WP36088 180 aa6.14□□□□□ -1.43
RPB7YDR404C OMA1P36163 345 aa6.14□□□□□ -1.43
RPB7YDR404C PBP2P38151 413 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
RPB7YDR404C PEX28P38848 579 aa6.14□□□□□ -1.43
RPB7YDR404C SPF1P39986 1215 aaKnown RBP6.14□□□□□ -1.43
RPB7YDR404C BUD6P41697 788 aa6.14□□□□□ -1.43
RPB7YDR404C KIP3P53086 805 aaKnown RBP6.14□□□□□ -1.43
RPB7YDR404C HUL5P53119 910 aa6.14□□□□□ -1.43
RPB7YDR404C TDA5Q06417 326 aaKnown RBP6.14□□□□□ -1.43
RPB7YDR404C MRL1Q06815 381 aa6.14□□□□□ -1.43
RPB7YDR404C YLR122CQ12312 125 aa6.14□□□□□ -1.43
RPB7YDR404C PRP5P21372 849 aaPredicted RBP6.13□□□□□ -1.43
RPB7YDR404C GNP1P48813 663 aa6.13□□□□□ -1.43
RPB7YDR404C NCE103P53615 221 aa6.13□□□□□ -1.43
RPB7YDR404C EEB1Q02891 456 aa6.13□□□□□ -1.43
RPB7YDR404C MED7Q08278 222 aa6.13□□□□□ -1.43
RPB7YDR404C YOR223WQ12015 292 aa6.13□□□□□ -1.43
RPB7YDR404C YOR131CQ12486 218 aa6.13□□□□□ -1.43
RPB7YDR404C BUD3P25558 1636 aa6.13□□□□□ -1.43
RPB7YDR404C RAD4P14736 754 aa6.12□□□□□ -1.43
RPB7YDR404C YGL140CP53120 1219 aa6.12□□□□□ -1.43
RPB7YDR404C ALG12P53730 551 aa6.12□□□□□ -1.43
RPB7YDR404C PEX13P80667 386 aa6.12□□□□□ -1.43
RPB7YDR404C NOG1Q02892 647 aaKnown RBP6.12□□□□□ -1.43
RPB7YDR404C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RPB7YDR404C TMA46Q12000 345 aaKnown RBP6.12□□□□□ -1.43
RPB7YDR404C FAL1Q12099 399 aaKnown RBP6.12□□□□□ -1.43
RPB7YDR404C YSP2Q06681 1438 aa6.11□□□□□ -1.43
RPB7YDR404C SEC23P15303 768 aaKnown RBP6.11□□□□□ -1.43
RPB7YDR404C BAS1P22035 811 aa6.11□□□□□ -1.43
RPB7YDR404C GCV1P48015 400 aa6.11□□□□□ -1.43
RPB7YDR404C YGR130CP53278 816 aa6.11□□□□□ -1.43
RPB7YDR404C NAN1Q02931 896 aaKnown RBP6.11□□□□□ -1.43
RPB7YDR404C YIG1Q08956 461 aa6.11□□□□□ -1.43
RPB7YDR404C HTS1P07263 546 aaKnown RBP6.1□□□□□ -1.43
RPB7YDR404C HEM13P11353 328 aaKnown RBP6.1□□□□□ -1.43
RPB7YDR404C MSH3P25336 1018 aa6.1□□□□□ -1.43
RPB7YDR404C RAD27P26793 382 aa6.1□□□□□ -1.43
RPB7YDR404C RRP14P36080 434 aaKnown RBP6.1□□□□□ -1.43
RPB7YDR404C HDA2Q06629 674 aa6.1□□□□□ -1.43
RPB7YDR404C GIC2Q06648 383 aa6.1□□□□□ -1.43
RPB7YDR404C TIM54P47045 478 aa6.09□□□□□ -1.43
RPB7YDR404C TYW3P53177 273 aa6.09□□□□□ -1.43
RPB7YDR404C UTP22P53254 1237 aaPredicted RBP6.09□□□□□ -1.43
RPB7YDR404C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RPB7YDR404C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RPB7YDR404C TAF13P11747 167 aa6.08□□□□□ -1.44
RPB7YDR404C LIP5P32875 414 aa6.08□□□□□ -1.44
RPB7YDR404C TOS1P38288 455 aa6.08□□□□□ -1.44
RPB7YDR404C HXT13P39924 564 aa6.08□□□□□ -1.44
RPB7YDR404C HXT17P53631 564 aa6.08□□□□□ -1.44
RPB7YDR404C HXT15P54854 567 aa6.08□□□□□ -1.44
RPB7YDR404C MAK10Q02197 733 aa6.08□□□□□ -1.44
RPB7YDR404C DOT1Q04089 582 aaKnown RBP6.08□□□□□ -1.44
RPB7YDR404C GLT1Q12680 2145 aaKnown RBP6.08□□□□□ -1.44
RPB7YDR404C TRP3P00937 484 aa6.07□□□□□ -1.44
RPB7YDR404C MSB1P21339 1137 aaKnown RBP6.07□□□□□ -1.44
RPB7YDR404C RDH54P38086 958 aa6.07□□□□□ -1.44
RPB7YDR404C EXO5P38289 585 aa6.07□□□□□ -1.44
RPB7YDR404C SHU2P38957 223 aa6.07□□□□□ -1.44
RPB7YDR404C MEC3Q02574 474 aa6.07□□□□□ -1.44
RPB7YDR404C PPM2Q08282 695 aa6.07□□□□□ -1.44
RPB7YDR404C TY3B-GQ99315 1547 aa6.07□□□□□ -1.44
RPB7YDR404C CYC7P00045 113 aa6.06□□□□□ -1.44
RPB7YDR404C RER2P35196 286 aa6.06□□□□□ -1.44
RPB7YDR404C YKL077WP36081 392 aa6.06□□□□□ -1.44
RPB7YDR404C GPT2P36148 743 aa6.06□□□□□ -1.44
RPB7YDR404C YKR073CP36153 106 aa6.06□□□□□ -1.44
RPB7YDR404C REI1P38344 393 aaPredicted RBP6.06□□□□□ -1.44
RPB7YDR404C YAP3P38749 330 aa6.06□□□□□ -1.44
RPB7YDR404C FPR3P38911 411 aaKnown RBP6.06□□□□□ -1.44
RPB7YDR404C NUP82P40368 713 aa6.06□□□□□ -1.44
RPB7YDR404C SPO74P45819 413 aa6.06□□□□□ -1.44
RPB7YDR404C INP52P50942 1183 aa6.06□□□□□ -1.44
RPB7YDR404C SIW14P53965 281 aa6.06□□□□□ -1.44
RPB7YDR404C NSI1Q12457 570 aa6.06□□□□□ -1.44
RPB7YDR404C STH1P32597 1359 aa6.06□□□□□ -1.44
RPB7YDR404C TRP2P00899 507 aaKnown RBP6.05□□□□□ -1.44
RPB7YDR404C LYP1P32487 611 aa6.05□□□□□ -1.44
RPB7YDR404C STE5P32917 917 aa6.05□□□□□ -1.44
RPB7YDR404C YBR184WP38299 523 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms