RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A CTH1P47976 325 aa5.05□□□□□ -1.6
RIM1YCR028C-A ALD6P54115 500 aaKnown RBP5.05□□□□□ -1.6
RIM1YCR028C-A HOS3Q02959 697 aaKnown RBP5.05□□□□□ -1.6
RIM1YCR028C-A SSY1Q03770 852 aa5.05□□□□□ -1.6
RIM1YCR028C-A YLR225CQ05948 407 aaKnown RBP5.05□□□□□ -1.6
RIM1YCR028C-A AOS1Q06624 347 aa5.05□□□□□ -1.6
RIM1YCR028C-A BRE4Q07660 1125 aa5.05□□□□□ -1.6
RIM1YCR028C-A SAM35P14693 329 aa5.04□□□□□ -1.6
RIM1YCR028C-A PUF4P25339 888 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
RIM1YCR028C-A ADP1P25371 1049 aa5.04□□□□□ -1.6
RIM1YCR028C-A MDL2P33311 773 aa5.04□□□□□ -1.6
RIM1YCR028C-A MOT2P34909 587 aaKnown RBP5.04□□□□□ -1.6
RIM1YCR028C-A PTC7P38797 343 aa5.04□□□□□ -1.6
RIM1YCR028C-A MPH1P40562 993 aa5.04□□□□□ -1.6
RIM1YCR028C-A GTS1P40956 396 aa5.04□□□□□ -1.6
RIM1YCR028C-A SPO20Q04359 397 aa5.04□□□□□ -1.6
RIM1YCR028C-A YER152CP10356 443 aa5.03□□□□□ -1.6
RIM1YCR028C-A HNT2P49775 206 aa5.03□□□□□ -1.6
RIM1YCR028C-A TNA1P53322 534 aa5.03□□□□□ -1.6
RIM1YCR028C-A RCL1Q08096 367 aaPredicted RBP5.03□□□□□ -1.6
RIM1YCR028C-A FAL1Q12099 399 aaKnown RBP5.03□□□□□ -1.6
RIM1YCR028C-A INO1P11986 533 aa5.02□□□□□ -1.61
RIM1YCR028C-A PRI2P20457 528 aa5.02□□□□□ -1.61
RIM1YCR028C-A BAS1P22035 811 aa5.02□□□□□ -1.61
RIM1YCR028C-A RPN3P40016 523 aaKnown RBP5.02□□□□□ -1.61
RIM1YCR028C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
RIM1YCR028C-A OPI10Q08202 246 aa5.02□□□□□ -1.61
RIM1YCR028C-A COQ4O13525 335 aa5.01□□□□□ -1.61
RIM1YCR028C-A SRO9P25567 434 aaKnown RBP5.01□□□□□ -1.61
RIM1YCR028C-A YGL176CP46945 554 aa5.01□□□□□ -1.61
RIM1YCR028C-A SEA4P38164 1038 aa5□□□□□ -1.61
RIM1YCR028C-A KRI1P42846 591 aaKnown RBP5□□□□□ -1.61
RIM1YCR028C-A ESC2Q06340 456 aa5□□□□□ -1.61
RIM1YCR028C-A RSC58Q07979 502 aa5□□□□□ -1.61
RIM1YCR028C-A RSB1Q08417 382 aa5□□□□□ -1.61
RIM1YCR028C-A GNT1Q12096 491 aa5□□□□□ -1.61
RIM1YCR028C-A WRS1Q12109 432 aaKnown RBP5□□□□□ -1.61
RIM1YCR028C-A RKM4Q12504 494 aa5□□□□□ -1.61
RIM1YCR028C-A ABD1P32783 436 aaPredicted RBP4.99□□□□□ -1.61
RIM1YCR028C-A AIM26P32858 118 aa4.99□□□□□ -1.61
RIM1YCR028C-A HSP78P33416 811 aa4.99□□□□□ -1.61
RIM1YCR028C-A BAP2P38084 609 aa4.99□□□□□ -1.61
RIM1YCR028C-A CCZ1P38273 704 aa4.99□□□□□ -1.61
RIM1YCR028C-A MXR1P40029 184 aa4.99□□□□□ -1.61
RIM1YCR028C-A YFL054CP43549 646 aa4.99□□□□□ -1.61
RIM1YCR028C-A SPP382Q06411 708 aaPredicted RBP4.99□□□□□ -1.61
RIM1YCR028C-A NBA1Q08229 501 aaKnown RBP4.99□□□□□ -1.61
RIM1YCR028C-A SNF5P18480 905 aa4.98□□□□□ -1.61
RIM1YCR028C-A DBP2P24783 546 aaKnown RBP4.98□□□□□ -1.61
RIM1YCR028C-A YKL107WP34251 309 aa4.98□□□□□ -1.61
RIM1YCR028C-A PIK1P39104 1066 aa4.98□□□□□ -1.61
RIM1YCR028C-A IRC24P40580 263 aa4.98□□□□□ -1.61
RIM1YCR028C-A YPL066WQ12194 479 aa4.98□□□□□ -1.61
RIM1YCR028C-A LPX1Q12405 387 aaKnown RBP4.98□□□□□ -1.61
RIM1YCR028C-A RPL11AP0C0W9 174 aaKnown RBP4.97□□□□□ -1.61
RIM1YCR028C-A AGP1P25376 633 aa4.97□□□□□ -1.61
RIM1YCR028C-A PIN4P34217 668 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
RIM1YCR028C-A YKL069WP36088 180 aa4.97□□□□□ -1.61
RIM1YCR028C-A RPL11BQ3E757 174 aaPredicted RBP4.97□□□□□ -1.61
RIM1YCR028C-A SBA1P28707 216 aaKnown RBP4.96□□□□□ -1.62
RIM1YCR028C-A POL12P38121 705 aaPredicted RBP4.96□□□□□ -1.62
RIM1YCR028C-A PNT1P38969 423 aa4.96□□□□□ -1.62
RIM1YCR028C-A MBP1P39678 833 aa4.96□□□□□ -1.62
RIM1YCR028C-A SNF7P39929 240 aaKnown RBP4.96□□□□□ -1.62
RIM1YCR028C-A FOL2P51601 243 aaKnown RBP4.96□□□□□ -1.62
RIM1YCR028C-A ORC3P54790 616 aa4.96□□□□□ -1.62
RIM1YCR028C-A SPS1P08458 490 aa4.95□□□□□ -1.62
RIM1YCR028C-A GRX1P25373 110 aaKnown RBP4.95□□□□□ -1.62
RIM1YCR028C-A LRG1P35688 1017 aa4.95□□□□□ -1.62
RIM1YCR028C-A VBA5P36172 582 aa4.95□□□□□ -1.62
RIM1YCR028C-A GEM1P39722 662 aa4.95□□□□□ -1.62
RIM1YCR028C-A TDA5Q06417 326 aaKnown RBP4.95□□□□□ -1.62
RIM1YCR028C-A ACM1Q08981 209 aa4.95□□□□□ -1.62
RIM1YCR028C-A UGA2P38067 497 aa4.94□□□□□ -1.62
RIM1YCR028C-A SPF1P39986 1215 aaKnown RBP4.94□□□□□ -1.62
RIM1YCR028C-A SIP5P40210 489 aaKnown RBP4.94□□□□□ -1.62
RIM1YCR028C-A DFG16Q99234 619 aa4.94□□□□□ -1.62
RIM1YCR028C-A SEC26P41810 973 aaKnown RBP4.93□□□□□ -1.62
RIM1YCR028C-A SHE9Q04172 456 aa4.93□□□□□ -1.62
RIM1YCR028C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
RIM1YCR028C-A SSF2Q12153 453 aaPredicted RBP4.92□□□□□ -1.62
RIM1YCR028C-A THS1P04801 734 aaKnown RBP4.91□□□□□ -1.62
RIM1YCR028C-A SLA2P33338 968 aa4.91□□□□□ -1.62
RIM1YCR028C-A MRP8P35719 219 aa4.91□□□□□ -1.62
RIM1YCR028C-A ABZ1P37254 787 aaPredicted RBP4.91□□□□□ -1.62
RIM1YCR028C-A RFC5P38251 354 aa4.91□□□□□ -1.62
RIM1YCR028C-A YBR184WP38299 523 aa4.91□□□□□ -1.62
RIM1YCR028C-A ETP1P38748 585 aaKnown RBP4.91□□□□□ -1.62
RIM1YCR028C-A AVT1P47082 602 aa4.91□□□□□ -1.62
RIM1YCR028C-A ECL1P48235 211 aa4.91□□□□□ -1.62
RIM1YCR028C-A SVS1Q12254 260 aa4.91□□□□□ -1.62
RIM1YCR028C-A BI4P03879 638 aa4.9□□□□□ -1.63
RIM1YCR028C-A STE5P32917 917 aa4.9□□□□□ -1.63
RIM1YCR028C-A SEG2P34250 1132 aa4.9□□□□□ -1.63
RIM1YCR028C-A PBY1P38254 753 aa4.9□□□□□ -1.63
RIM1YCR028C-A IRR1P40541 1150 aa4.9□□□□□ -1.63
RIM1YCR028C-A APL1P27351 700 aa4.89□□□□□ -1.63
RIM1YCR028C-A NNF1P47149 201 aa4.89□□□□□ -1.63
RIM1YCR028C-A RSM24Q03976 319 aa4.89□□□□□ -1.63
RIM1YCR028C-A YKL151CP36059 337 aa4.88□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms