RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C GNP1P48813 663 aa4.33□□□□□ -1.72
SRD1YCR018C EEB1Q02891 456 aa4.33□□□□□ -1.72
SRD1YCR018C NAN1Q02931 896 aaKnown RBP4.33□□□□□ -1.72
SRD1YCR018C UTP5Q04177 643 aaKnown RBP4.33□□□□□ -1.72
SRD1YCR018C LAP2Q10740 671 aa4.33□□□□□ -1.72
SRD1YCR018C TRP2P00899 507 aaKnown RBP4.32□□□□□ -1.72
SRD1YCR018C RAD4P14736 754 aa4.32□□□□□ -1.72
SRD1YCR018C MKK2P32491 506 aa4.32□□□□□ -1.72
SRD1YCR018C SNF7P39929 240 aaKnown RBP4.32□□□□□ -1.72
SRD1YCR018C SPF1P39986 1215 aaKnown RBP4.32□□□□□ -1.72
SRD1YCR018C IOC3P43596 787 aa4.32□□□□□ -1.72
SRD1YCR018C ADP1P25371 1049 aa4.31□□□□□ -1.72
SRD1YCR018C SYP1P25623 870 aaKnown RBP4.31□□□□□ -1.72
SRD1YCR018C YKL069WP36088 180 aa4.31□□□□□ -1.72
SRD1YCR018C HSE1P38753 452 aa4.31□□□□□ -1.72
SRD1YCR018C YAR028WP39548 234 aa4.31□□□□□ -1.72
SRD1YCR018C HXT13P39924 564 aa4.31□□□□□ -1.72
SRD1YCR018C TIM54P47045 478 aa4.31□□□□□ -1.72
SRD1YCR018C HXT17P53631 564 aa4.31□□□□□ -1.72
SRD1YCR018C HXT15P54854 567 aa4.31□□□□□ -1.72
SRD1YCR018C RKM2Q03942 479 aa4.31□□□□□ -1.72
SRD1YCR018C YLR225CQ05948 407 aaKnown RBP4.31□□□□□ -1.72
SRD1YCR018C ALG6Q12001 544 aaKnown RBP4.31□□□□□ -1.72
SRD1YCR018C INO1P11986 533 aa4.3□□□□□ -1.72
SRD1YCR018C AGP1P25376 633 aa4.3□□□□□ -1.72
SRD1YCR018C ABD1P32783 436 aaPredicted RBP4.3□□□□□ -1.72
SRD1YCR018C PPG1P32838 368 aa4.3□□□□□ -1.72
SRD1YCR018C MCM7P38132 845 aa4.3□□□□□ -1.72
SRD1YCR018C CNN1P43618 361 aa4.3□□□□□ -1.72
SRD1YCR018C HUL5P53119 910 aa4.3□□□□□ -1.72
SRD1YCR018C ORC3P54790 616 aa4.3□□□□□ -1.72
SRD1YCR018C BDF2Q07442 638 aa4.3□□□□□ -1.72
SRD1YCR018C SPO75Q07798 868 aa4.3□□□□□ -1.72
SRD1YCR018C OSH2Q12451 1283 aa4.3□□□□□ -1.72
SRD1YCR018C SBA1P28707 216 aaKnown RBP4.29□□□□□ -1.72
SRD1YCR018C MOT2P34909 587 aaKnown RBP4.29□□□□□ -1.72
SRD1YCR018C MRP8P35719 219 aa4.29□□□□□ -1.72
SRD1YCR018C NMD2P38798 1089 aaKnown RBP4.29□□□□□ -1.72
SRD1YCR018C RNH70P53331 553 aa4.29□□□□□ -1.72
SRD1YCR018C RAT1Q02792 1006 aaKnown RBP4.29□□□□□ -1.72
SRD1YCR018C TIF35Q04067 274 aaKnown RBP4.29□□□□□ -1.72
SRD1YCR018C PTC5Q12511 572 aa4.29□□□□□ -1.72
SRD1YCR018C DBP5P20449 482 aaKnown RBP4.28□□□□□ -1.72
SRD1YCR018C PIN4P34217 668 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
SRD1YCR018C YKL107WP34251 309 aa4.28□□□□□ -1.72
SRD1YCR018C VBA5P36172 582 aa4.28□□□□□ -1.72
SRD1YCR018C BRN1P38170 754 aa4.28□□□□□ -1.72
SRD1YCR018C AIM3P38266 947 aaKnown RBP4.28□□□□□ -1.72
SRD1YCR018C YBR184WP38299 523 aa4.28□□□□□ -1.72
SRD1YCR018C VPS53P47061 822 aa4.28□□□□□ -1.72
SRD1YCR018C YGR045CP53229 120 aa4.28□□□□□ -1.72
SRD1YCR018C ELA1P53861 379 aaPredicted RBP4.28□□□□□ -1.72
SRD1YCR018C RPN4Q03465 531 aa4.28□□□□□ -1.72
SRD1YCR018C SSY1Q03770 852 aa4.28□□□□□ -1.72
SRD1YCR018C DOT1Q04089 582 aaKnown RBP4.28□□□□□ -1.72
SRD1YCR018C ESC2Q06340 456 aa4.28□□□□□ -1.72
SRD1YCR018C RKM4Q12504 494 aa4.28□□□□□ -1.72
SRD1YCR018C PUF4P25339 888 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SRD1YCR018C NFS1P25374 497 aa4.27□□□□□ -1.73
SRD1YCR018C ALG3P38179 458 aa4.27□□□□□ -1.73
SRD1YCR018C IRR1P40541 1150 aa4.27□□□□□ -1.73
SRD1YCR018C HNT2P49775 206 aa4.27□□□□□ -1.73
SRD1YCR018C YGR125WP53273 1036 aa4.27□□□□□ -1.73
SRD1YCR018C SHE9Q04172 456 aa4.27□□□□□ -1.73
SRD1YCR018C TAD3Q9URQ3 322 aa4.27□□□□□ -1.73
SRD1YCR018C RPS4AP0CX35 261 aaKnown RBP4.26□□□□□ -1.73
SRD1YCR018C RPS4BP0CX36 261 aaKnown RBP4.26□□□□□ -1.73
SRD1YCR018C MLS1P30952 554 aa4.26□□□□□ -1.73
SRD1YCR018C AFG2P32794 780 aa4.26□□□□□ -1.73
SRD1YCR018C PBP2P38151 413 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SRD1YCR018C PBY1P38254 753 aa4.26□□□□□ -1.73
SRD1YCR018C RGD1P38339 666 aa4.26□□□□□ -1.73
SRD1YCR018C TAT2P38967 592 aa4.26□□□□□ -1.73
SRD1YCR018C YGL176CP46945 554 aa4.26□□□□□ -1.73
SRD1YCR018C EAF1Q06337 982 aa4.26□□□□□ -1.73
SRD1YCR018C FLC1Q08967 793 aa4.26□□□□□ -1.73
SRD1YCR018C LPX1Q12405 387 aaKnown RBP4.26□□□□□ -1.73
SRD1YCR018C CIT2P08679 460 aa4.25□□□□□ -1.73
SRD1YCR018C HSP60P19882 572 aaKnown RBP4.25□□□□□ -1.73
SRD1YCR018C RET1P22276 1149 aaKnown RBP4.25□□□□□ -1.73
SRD1YCR018C ARE1P25628 610 aa4.25□□□□□ -1.73
SRD1YCR018C NNK1P36003 928 aa4.25□□□□□ -1.73
SRD1YCR018C QNS1P38795 714 aaKnown RBP4.25□□□□□ -1.73
SRD1YCR018C ERP6P53198 216 aa4.25□□□□□ -1.73
SRD1YCR018C GSF2Q04697 403 aaKnown RBP4.25□□□□□ -1.73
SRD1YCR018C SPP382Q06411 708 aaPredicted RBP4.25□□□□□ -1.73
SRD1YCR018C TRE1Q08919 783 aa4.25□□□□□ -1.73
SRD1YCR018C GAL11P19659 1081 aa4.24□□□□□ -1.73
SRD1YCR018C PRP9P19736 530 aaKnown RBP4.24□□□□□ -1.73
SRD1YCR018C RPL8BP29453 256 aaKnown RBP4.24□□□□□ -1.73
SRD1YCR018C STE5P32917 917 aa4.24□□□□□ -1.73
SRD1YCR018C GGA2P38817 585 aaKnown RBP4.24□□□□□ -1.73
SRD1YCR018C CHZ1P40019 153 aaPredicted RBP4.24□□□□□ -1.73
SRD1YCR018C HUL4P40985 892 aa4.24□□□□□ -1.73
SRD1YCR018C RIM8P53179 542 aa4.24□□□□□ -1.73
SRD1YCR018C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SRD1YCR018C RSA3Q05942 220 aaKnown RBP4.24□□□□□ -1.73
SRD1YCR018C YPL260WQ08977 551 aa4.24□□□□□ -1.73
SRD1YCR018C SCT1P32784 759 aa4.23□□□□□ -1.73
SRD1YCR018C SMY2P32909 740 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms