RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C RAD27P26793 382 aa6.96□□□□□ -1.3
RTG3YBL103C RER2P35196 286 aa6.96□□□□□ -1.3
RTG3YBL103C CNN1P43618 361 aa6.96□□□□□ -1.3
RTG3YBL103C FOL2P51601 243 aaKnown RBP6.96□□□□□ -1.3
RTG3YBL103C TSA1P34760 196 aaKnown RBP6.95□□□□□ -1.3
RTG3YBL103C CCZ1P38273 704 aa6.95□□□□□ -1.3
RTG3YBL103C NIT1P40447 199 aa6.95□□□□□ -1.3
RTG3YBL103C PRP43P53131 767 aaKnown RBP6.95□□□□□ -1.3
RTG3YBL103C CDA2Q06703 312 aa6.95□□□□□ -1.3
RTG3YBL103C NBA1Q08229 501 aaKnown RBP6.95□□□□□ -1.3
RTG3YBL103C YER152CP10356 443 aa6.94□□□□□ -1.3
RTG3YBL103C SNF5P18480 905 aa6.94□□□□□ -1.3
RTG3YBL103C DBP5P20449 482 aaKnown RBP6.94□□□□□ -1.3
RTG3YBL103C PET112P33893 541 aa6.94□□□□□ -1.3
RTG3YBL103C BAP2P38084 609 aa6.94□□□□□ -1.3
RTG3YBL103C RGD1P38339 666 aa6.94□□□□□ -1.3
RTG3YBL103C YFL054CP43549 646 aa6.94□□□□□ -1.3
RTG3YBL103C RPN3P40016 523 aaKnown RBP6.93□□□□□ -1.3
RTG3YBL103C SPS1P08458 490 aa6.92□□□□□ -1.3
RTG3YBL103C DUT1P33317 147 aa6.92□□□□□ -1.3
RTG3YBL103C UBP5P39944 805 aa6.92□□□□□ -1.3
RTG3YBL103C MRPL22P53881 309 aa6.92□□□□□ -1.3
RTG3YBL103C TIF35Q04067 274 aaKnown RBP6.92□□□□□ -1.3
RTG3YBL103C PUF4P25339 888 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
RTG3YBL103C MPH1P40562 993 aa6.92□□□□□ -1.3
RTG3YBL103C RSB1Q08417 382 aa6.92□□□□□ -1.3
RTG3YBL103C TMA46Q12000 345 aaKnown RBP6.92□□□□□ -1.3
RTG3YBL103C CDC34P14682 295 aa6.91□□□□□ -1.3
RTG3YBL103C MCM7P38132 845 aa6.91□□□□□ -1.3
RTG3YBL103C PIK1P39104 1066 aa6.91□□□□□ -1.3
RTG3YBL103C AIM3P38266 947 aaKnown RBP6.88□□□□□ -1.31
RTG3YBL103C HNT2P49775 206 aa6.88□□□□□ -1.31
RTG3YBL103C EEB1Q02891 456 aa6.88□□□□□ -1.31
RTG3YBL103C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
RTG3YBL103C TRP2P00899 507 aaKnown RBP6.87□□□□□ -1.31
RTG3YBL103C SEC26P41810 973 aaKnown RBP6.87□□□□□ -1.31
RTG3YBL103C MOT2P34909 587 aaKnown RBP6.86□□□□□ -1.31
RTG3YBL103C MNR2P35724 969 aa6.86□□□□□ -1.31
RTG3YBL103C ABZ1P37254 787 aaPredicted RBP6.86□□□□□ -1.31
RTG3YBL103C SNO2P53823 222 aa6.86□□□□□ -1.31
RTG3YBL103C LYP1P32487 611 aa6.85□□□□□ -1.31
RTG3YBL103C MET10P39692 1035 aa6.85□□□□□ -1.31
RTG3YBL103C MXR1P40029 184 aa6.85□□□□□ -1.31
RTG3YBL103C TYW3P53177 273 aa6.85□□□□□ -1.31
RTG3YBL103C GNT1Q12096 491 aa6.85□□□□□ -1.31
RTG3YBL103C BAS1P22035 811 aa6.84□□□□□ -1.31
RTG3YBL103C THI80P35202 319 aa6.84□□□□□ -1.31
RTG3YBL103C RPL11AP0C0W9 174 aaKnown RBP6.83□□□□□ -1.32
RTG3YBL103C INO1P11986 533 aa6.83□□□□□ -1.32
RTG3YBL103C PRP6P19735 899 aaPredicted RBP6.83□□□□□ -1.32
RTG3YBL103C DBP2P24783 546 aaKnown RBP6.83□□□□□ -1.32
RTG3YBL103C RPL11BQ3E757 174 aaPredicted RBP6.83□□□□□ -1.32
RTG3YBL103C CYC1P00044 109 aaPredicted RBP6.82□□□□□ -1.32
RTG3YBL103C RFC5P38251 354 aa6.82□□□□□ -1.32
RTG3YBL103C FAA4P47912 694 aaKnown RBP6.82□□□□□ -1.32
RTG3YBL103C ENV11P53246 860 aa6.82□□□□□ -1.32
RTG3YBL103C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
RTG3YBL103C YPL277CQ08989 487 aa6.82□□□□□ -1.32
RTG3YBL103C YPL066WQ12194 479 aa6.82□□□□□ -1.32
RTG3YBL103C SVS1Q12254 260 aa6.82□□□□□ -1.32
RTG3YBL103C RPS13P05756 151 aaKnown RBP6.81□□□□□ -1.32
RTG3YBL103C YLR225CQ05948 407 aaKnown RBP6.81□□□□□ -1.32
RTG3YBL103C UGA2P38067 497 aa6.8□□□□□ -1.32
RTG3YBL103C YGR053CP53234 283 aa6.8□□□□□ -1.32
RTG3YBL103C GDE1Q02979 1223 aa6.8□□□□□ -1.32
RTG3YBL103C SPP382Q06411 708 aaPredicted RBP6.8□□□□□ -1.32
RTG3YBL103C YOR352WQ08816 343 aa6.8□□□□□ -1.32
RTG3YBL103C YGL176CP46945 554 aa6.79□□□□□ -1.32
RTG3YBL103C RIM8P53179 542 aa6.79□□□□□ -1.32
RTG3YBL103C ROT1Q03691 256 aa6.79□□□□□ -1.32
RTG3YBL103C RSM24Q03976 319 aa6.79□□□□□ -1.32
RTG3YBL103C SGD1Q06132 899 aa6.79□□□□□ -1.32
RTG3YBL103C JIP5Q06214 492 aaPredicted RBP6.79□□□□□ -1.32
RTG3YBL103C ESC2Q06340 456 aa6.79□□□□□ -1.32
RTG3YBL103C SOD2P00447 233 aa6.79□□□□□ -1.32
RTG3YBL103C TOD6P34219 525 aa6.79□□□□□ -1.32
RTG3YBL103C PNT1P38969 423 aa6.79□□□□□ -1.32
RTG3YBL103C SPO20Q04359 397 aa6.79□□□□□ -1.32
RTG3YBL103C ACM1Q08981 209 aa6.79□□□□□ -1.32
RTG3YBL103C RKM4Q12504 494 aa6.79□□□□□ -1.32
RTG3YBL103C CMP2P14747 604 aa6.78□□□□□ -1.32
RTG3YBL103C LAM1P38851 1228 aa6.78□□□□□ -1.32
RTG3YBL103C MAD1P40957 749 aa6.78□□□□□ -1.32
RTG3YBL103C RIB2Q12362 591 aaKnown RBP6.78□□□□□ -1.32
RTG3YBL103C BI4P03879 638 aa6.77□□□□□ -1.33
RTG3YBL103C CLN2P20438 545 aa6.77□□□□□ -1.33
RTG3YBL103C SRM1P21827 482 aa6.77□□□□□ -1.33
RTG3YBL103C APL1P27351 700 aa6.77□□□□□ -1.33
RTG3YBL103C SLA2P33338 968 aa6.77□□□□□ -1.33
RTG3YBL103C YKL107WP34251 309 aa6.77□□□□□ -1.33
RTG3YBL103C CWC24P53769 259 aa6.77□□□□□ -1.33
RTG3YBL103C VPS16Q03308 798 aa6.77□□□□□ -1.33
RTG3YBL103C PLB2Q03674 706 aa6.77□□□□□ -1.33
RTG3YBL103C ESC8Q08119 714 aa6.77□□□□□ -1.33
RTG3YBL103C GAL10P04397 699 aa6.76□□□□□ -1.33
RTG3YBL103C MEF2P39677 819 aa6.76□□□□□ -1.33
RTG3YBL103C GEM1P39722 662 aa6.76□□□□□ -1.33
RTG3YBL103C TAF1P46677 1066 aa6.76□□□□□ -1.33
RTG3YBL103C ABD1P32783 436 aaPredicted RBP6.75□□□□□ -1.33
RTG3YBL103C SIP5P40210 489 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 154.7 ms