RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 CHRNA2Q15822 529 aa11.15□□□□□ -0.63
KCNMA1-288ENST00000640773 TRIM44Q96DX7 344 aaPredicted RBP11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 OFD1O75665 1012 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 KIF20AO95235 890 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
KCNMA1-288ENST00000640773 RXRBP28702 533 aa11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 FTSJ3Q8IY81 847 aaKnown RBP11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 CASZ1Q86V15 1759 aa11.12□□□□□ -0.63
KCNMA1-288ENST00000640773 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 BECN1Q14457 450 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 TJP1Q07157 1748 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 RCAN3Q9UKA8 241 aa11.11□□□□□ -0.63
KCNMA1-288ENST00000640773 GTPBP4Q9BZE4 634 aaKnown RBP11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 C5P01031 1676 aa11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 MEX3CQ5U5Q3 659 aaKnown RBP11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
KCNMA1-288ENST00000640773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
KCNMA1-288ENST00000640773 LETM1O95202 739 aaPredicted RBP11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 LMOD2Q6P5Q4 547 aa11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 EYA1Q99502 592 aa11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 ANTXR1Q9H6X2 564 aa11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 RALBP1Q15311 655 aa11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 ANP32BQ92688 251 aaKnown RBP11.08□□□□□ -0.64
KCNMA1-288ENST00000640773 ZNF830Q96NB3 372 aaPredicted RBP11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 KDM2BQ8NHM5 1336 aa11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 DYNC1I1O14576 645 aa11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 SEPT12Q8IYM1 358 aa11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
KCNMA1-288ENST00000640773 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 LAMB4A4D0S4 1761 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 MTHFSP49914 203 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 CENPQQ7L2Z9 268 aaPredicted RBP11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 PRDM10Q9NQV6 1147 aa11.06□□□□□ -0.64
KCNMA1-288ENST00000640773 MCM4P33991 863 aa11.05□□□□□ -0.64
KCNMA1-288ENST00000640773 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
KCNMA1-288ENST00000640773 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-288ENST00000640773 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-288ENST00000640773 MARCH10Q8NA82 808 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-288ENST00000640773 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
KCNMA1-288ENST00000640773 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
KCNMA1-288ENST00000640773 MYBBP1AQ9BQG0 1328 aaKnown RBP11.04□□□□□ -0.64
KCNMA1-288ENST00000640773 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 SOCS7O14512 581 aa11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 TRAK2O60296 914 aa11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 IL2RBP14784 551 aa11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 ZFP91Q96JP5 570 aaPredicted RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 GZF1Q9H116 711 aaPredicted RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
KCNMA1-288ENST00000640773 CEMIPQ8WUJ3 1361 aa11.02□□□□□ -0.64
KCNMA1-288ENST00000640773 AMPHP49418 695 aa11.02□□□□□ -0.65
KCNMA1-288ENST00000640773 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
KCNMA1-288ENST00000640773 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 C4AP0C0L4 1744 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 C4BP0C0L5 1744 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 UQCRHLA0A096LP55 91 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 UQCRHP07919 91 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 MSNP26038 577 aaKnown RBP11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 KRT27Q7Z3Y8 459 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 PPP1R9BQ96SB3 815 aa11.01□□□□□ -0.65
KCNMA1-288ENST00000640773 CYP27B1O15528 508 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
KCNMA1-288ENST00000640773 TOM1L2Q6ZVM7 507 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 STRN4Q9NRL3 753 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 LRP5O75197 1615 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 R3HCC1Q9Y3T6 440 aaKnown RBP11□□□□□ -0.65
KCNMA1-288ENST00000640773 EVA1CP58658 441 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 CRBNQ96SW2 442 aa11□□□□□ -0.65
KCNMA1-288ENST00000640773 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
KCNMA1-288ENST00000640773 BCORQ6W2J9 1755 aa10.99□□□□□ -0.65
KCNMA1-288ENST00000640773 VGLL3A8MV65 326 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms