RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
HLA-C-210ENST00000640219 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
HLA-C-210ENST00000640219 HSPA1AP0DMV8 641 aaKnown RBP19.2■□□□□ 0.66
HLA-C-210ENST00000640219 HSPA1BP0DMV9 641 aaKnown RBP19.2■□□□□ 0.66
HLA-C-210ENST00000640219 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
HLA-C-210ENST00000640219 PCNTO95613 3336 aa19.2■□□□□ 0.66
HLA-C-210ENST00000640219 ITGB4P16144 1822 aa19.2■□□□□ 0.66
HLA-C-210ENST00000640219 C10orf71Q711Q0 1435 aa19.19■□□□□ 0.66
HLA-C-210ENST00000640219 ITPK1Q13572 414 aa19.19■□□□□ 0.66
HLA-C-210ENST00000640219 NLGN1Q8N2Q7 840 aa19.19■□□□□ 0.66
HLA-C-210ENST00000640219 SMC1BQ8NDV3 1235 aa19.19■□□□□ 0.66
HLA-C-210ENST00000640219 PUS7Q96PZ0 661 aaKnown RBP19.19■□□□□ 0.66
HLA-C-210ENST00000640219 CCDC87Q9NVE4 849 aa19.19■□□□□ 0.66
HLA-C-210ENST00000640219 TMF1P82094 1093 aa19.18■□□□□ 0.66
HLA-C-210ENST00000640219 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
HLA-C-210ENST00000640219 ATP6V1AP38606 617 aa19.17■□□□□ 0.66
HLA-C-210ENST00000640219 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
HLA-C-210ENST00000640219 TRAPPC3LQ5T215 181 aa19.16■□□□□ 0.66
HLA-C-210ENST00000640219 KCNA3P22001 575 aa19.15■□□□□ 0.66
HLA-C-210ENST00000640219 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
HLA-C-210ENST00000640219 HSP90AB2PQ58FF8 381 aa19.15■□□□□ 0.66
HLA-C-210ENST00000640219 ASAP1Q9ULH1 1129 aa19.15■□□□□ 0.66
HLA-C-210ENST00000640219 RTCBQ9Y3I0 505 aaKnown RBP19.15■□□□□ 0.66
HLA-C-210ENST00000640219 PKD1L3Q7Z443 1732 aa19.14■□□□□ 0.66
HLA-C-210ENST00000640219 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
HLA-C-210ENST00000640219 PIM2Q9P1W9 311 aa19.14■□□□□ 0.65
HLA-C-210ENST00000640219 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.65
HLA-C-210ENST00000640219 INSRP06213 1382 aa19.14■□□□□ 0.65
HLA-C-210ENST00000640219 DCAF5Q96JK2 942 aa19.13■□□□□ 0.65
HLA-C-210ENST00000640219 BRCA1P38398 1863 aaKnown RBP19.12■□□□□ 0.65
HLA-C-210ENST00000640219 TNRC6CQ9HCJ0 1690 aaKnown RBP19.11■□□□□ 0.65
HLA-C-210ENST00000640219 GYS1P13807 737 aa19.11■□□□□ 0.65
HLA-C-210ENST00000640219 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
HLA-C-210ENST00000640219 ARHGEF1Q92888 912 aaKnown RBP19.11■□□□□ 0.65
HLA-C-210ENST00000640219 GGNBP2Q9H3C7 697 aa19.11■□□□□ 0.65
HLA-C-210ENST00000640219 SPG7Q9UQ90 795 aa19.11■□□□□ 0.65
HLA-C-210ENST00000640219 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
HLA-C-210ENST00000640219 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
HLA-C-210ENST00000640219 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
HLA-C-210ENST00000640219 SLC34A2O95436 690 aa19.1■□□□□ 0.65
HLA-C-210ENST00000640219 ATG3Q9NT62 314 aa19.1■□□□□ 0.65
HLA-C-210ENST00000640219 FLT4P35916 1363 aa19.09■□□□□ 0.65
HLA-C-210ENST00000640219 FYB1O15117 783 aa19.09■□□□□ 0.65
HLA-C-210ENST00000640219 ADRA2BP18089 450 aa19.09■□□□□ 0.65
HLA-C-210ENST00000640219 RFC4P35249 363 aa19.09■□□□□ 0.65
HLA-C-210ENST00000640219 VEGFAP15692 232 aaPredicted RBP19.06■□□□□ 0.64
HLA-C-210ENST00000640219 RC3H1Q5TC82 1133 aaKnown RBP19.06■□□□□ 0.64
HLA-C-210ENST00000640219 TESK2Q96S53 571 aa19.06■□□□□ 0.64
HLA-C-210ENST00000640219 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
HLA-C-210ENST00000640219 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
HLA-C-210ENST00000640219 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
HLA-C-210ENST00000640219 ZC3H4Q9UPT8 1303 aaKnown RBP19.04■□□□□ 0.64
HLA-C-210ENST00000640219 IFNL2Q8IZJ0 200 aa19.04■□□□□ 0.64
HLA-C-210ENST00000640219 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
HLA-C-210ENST00000640219 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
HLA-C-210ENST00000640219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
HLA-C-210ENST00000640219 KDRP35968 1356 aa19.04■□□□□ 0.64
HLA-C-210ENST00000640219 PHKG2P15735 406 aa19.03■□□□□ 0.64
HLA-C-210ENST00000640219 CHRNA5P30532 468 aa19.03■□□□□ 0.64
HLA-C-210ENST00000640219 SBF1O95248 1867 aa19.03■□□□□ 0.64
HLA-C-210ENST00000640219 CNTNAP4Q9C0A0 1308 aa19.02■□□□□ 0.64
HLA-C-210ENST00000640219 GLTPD2A6NH11 291 aa19.02■□□□□ 0.64
HLA-C-210ENST00000640219 NCAPD2Q15021 1401 aa19.01■□□□□ 0.63
HLA-C-210ENST00000640219 RASSF7Q02833 373 aa19.01■□□□□ 0.63
HLA-C-210ENST00000640219 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
HLA-C-210ENST00000640219 LMNB1P20700 586 aa18.99■□□□□ 0.63
HLA-C-210ENST00000640219 DDR1Q08345 913 aa18.99■□□□□ 0.63
HLA-C-210ENST00000640219 FKBP8Q14318 412 aa18.99■□□□□ 0.63
HLA-C-210ENST00000640219 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
HLA-C-210ENST00000640219 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
HLA-C-210ENST00000640219 EYA1Q99502 592 aa18.98■□□□□ 0.63
HLA-C-210ENST00000640219 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
HLA-C-210ENST00000640219 KDM6AO15550 1401 aaPredicted RBP18.98■□□□□ 0.63
HLA-C-210ENST00000640219 ZNF831Q5JPB2 1677 aa18.98■□□□□ 0.63
HLA-C-210ENST00000640219 MKRN1Q9UHC7 482 aaKnown RBP18.97■□□□□ 0.63
HLA-C-210ENST00000640219 FOXN1O15353 648 aa18.96■□□□□ 0.63
HLA-C-210ENST00000640219 PRDM10Q9NQV6 1147 aa18.96■□□□□ 0.63
HLA-C-210ENST00000640219 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
HLA-C-210ENST00000640219 ERVV-2B6SEH9 535 aa18.95■□□□□ 0.62
HLA-C-210ENST00000640219 CREBZFQ9NS37 354 aa18.95■□□□□ 0.62
HLA-C-210ENST00000640219 TIMELESSQ9UNS1 1208 aa18.95■□□□□ 0.62
HLA-C-210ENST00000640219 USP42Q9H9J4 1324 aaKnown RBP18.95■□□□□ 0.62
HLA-C-210ENST00000640219 POLRMTO00411 1230 aaKnown RBP18.94■□□□□ 0.62
HLA-C-210ENST00000640219 POTECB2RU33 542 aa18.93■□□□□ 0.62
HLA-C-210ENST00000640219 CRKLP46109 303 aaKnown RBP18.93■□□□□ 0.62
HLA-C-210ENST00000640219 MYH14Q7Z406 1995 aaKnown RBP18.93■□□□□ 0.62
HLA-C-210ENST00000640219 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
HLA-C-210ENST00000640219 TM4SF1P30408 202 aa18.92■□□□□ 0.62
HLA-C-210ENST00000640219 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
HLA-C-210ENST00000640219 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
HLA-C-210ENST00000640219 PTCD1O75127 700 aaKnown RBP18.91■□□□□ 0.62
HLA-C-210ENST00000640219 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
HLA-C-210ENST00000640219 CTCFP49711 727 aaPredicted RBP18.9■□□□□ 0.62
HLA-C-210ENST00000640219 CABP4P57796 275 aa18.9■□□□□ 0.62
HLA-C-210ENST00000640219 AIDAQ96BJ3 306 aa18.9■□□□□ 0.62
HLA-C-210ENST00000640219 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
HLA-C-210ENST00000640219 TTLL6Q8N841 843 aa18.89■□□□□ 0.61
HLA-C-210ENST00000640219 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
HLA-C-210ENST00000640219 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
HLA-C-210ENST00000640219 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms