RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 ANKARQ7Z5J8 1434 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
PAX6-259ENST00000639916 FAM83GA6ND36 823 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 TRIM27P14373 513 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 FAM177BA6PVY3 158 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 ATF7IPQ6VMQ6 1270 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 PRIMPOLQ96LW4 560 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 PCDHB15Q9Y5E8 787 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
PAX6-259ENST00000639916 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 RAB3GAP1Q15042 981 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 NUTM2GQ5VZR2 741 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 HSCBQ8IWL3 235 aa11.04□□□□□ -0.64
PAX6-259ENST00000639916 NALCNQ8IZF0 1738 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 MMP14P50281 582 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
PAX6-259ENST00000639916 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
PAX6-259ENST00000639916 ZNF853P0CG23 659 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.64
PAX6-259ENST00000639916 AMPHP49418 695 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
PAX6-259ENST00000639916 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 PEAK1Q9H792 1746 aa11.03□□□□□ -0.64
PAX6-259ENST00000639916 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
PAX6-259ENST00000639916 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.65
PAX6-259ENST00000639916 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
PAX6-259ENST00000639916 VAMP4O75379 141 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
PAX6-259ENST00000639916 CAPN2P17655 700 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 ZNF445P59923 1031 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 KLHL40Q2TBA0 621 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 ABTB2Q8N961 1025 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 RBSNQ9H1K0 784 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 TSPYL6Q8N831 410 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 CCDC39Q9UFE4 941 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
PAX6-259ENST00000639916 KIF3AQ9Y496 699 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 DLG5Q8TDM6 1919 aa11.02□□□□□ -0.65
PAX6-259ENST00000639916 SBNO1A3KN83 1393 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 FLT4P35916 1363 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 TIGD1Q96MW7 591 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 KCNG1Q9UIX4 513 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 PHF8Q9UPP1 1060 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 TULP2O00295 520 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
PAX6-259ENST00000639916 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
PAX6-259ENST00000639916 PIK3C2AO00443 1686 aa11□□□□□ -0.65
PAX6-259ENST00000639916 KIAA2012Q0VF49 1180 aa11□□□□□ -0.65
PAX6-259ENST00000639916 RWDD1Q9H446 243 aaPredicted RBP11□□□□□ -0.65
PAX6-259ENST00000639916 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
PAX6-259ENST00000639916 CCDC66A2RUB6 948 aa11□□□□□ -0.65
PAX6-259ENST00000639916 PSEN1P49768 467 aa11□□□□□ -0.65
PAX6-259ENST00000639916 GABPB1Q06547 395 aaPredicted RBP11□□□□□ -0.65
PAX6-259ENST00000639916 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
PAX6-259ENST00000639916 SMC5Q8IY18 1101 aa11□□□□□ -0.65
PAX6-259ENST00000639916 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
PAX6-259ENST00000639916 CHMP4CQ96CF2 233 aa11□□□□□ -0.65
PAX6-259ENST00000639916 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
PAX6-259ENST00000639916 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
PAX6-259ENST00000639916 SLFN14P0C7P3 912 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 HSPA2P54652 639 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 ESCO1Q5FWF5 840 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 MCM10Q7L590 875 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 C8orf58Q8NAV2 365 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 BCCIPQ9P287 314 aaKnown RBP eCLIP10.99□□□□□ -0.65
PAX6-259ENST00000639916 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
PAX6-259ENST00000639916 EYA1Q99502 592 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
PAX6-259ENST00000639916 MRPL50Q8N5N7 158 aaKnown RBP10.98□□□□□ -0.65
PAX6-259ENST00000639916 FEZ1Q99689 392 aa10.98□□□□□ -0.65
PAX6-259ENST00000639916 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
PAX6-259ENST00000639916 PSME1Q06323 249 aa10.98□□□□□ -0.65
PAX6-259ENST00000639916 ZSCAN23Q3MJ62 389 aa10.98□□□□□ -0.65
PAX6-259ENST00000639916 RGPD1P0DJD0 1748 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 HOXC9P31274 260 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
PAX6-259ENST00000639916 OGFRQ9NZT2 677 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 FOXO3O43524 673 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 MYCNP04198 464 aaPredicted RBP10.97□□□□□ -0.65
PAX6-259ENST00000639916 MTHFSDQ2M296 383 aaKnown RBP10.97□□□□□ -0.65
PAX6-259ENST00000639916 CNPY4Q8N129 248 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 ANKRD7Q92527 254 aa10.97□□□□□ -0.65
PAX6-259ENST00000639916 IGSF1Q8N6C5 1336 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms