RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 LTBP3Q9NS15 1303 aa8.84□□□□□ -0.99
RTTN-215ENST00000639487 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
RTTN-215ENST00000639487 TEX13AQ9BXU3 409 aaPredicted RBP8.83□□□□□ -1
RTTN-215ENST00000639487 PHIPQ8WWQ0 1821 aa8.83□□□□□ -1
RTTN-215ENST00000639487 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
RTTN-215ENST00000639487 ABCC12Q96J65 1359 aa8.83□□□□□ -1
RTTN-215ENST00000639487 EIF4A2Q14240 407 aaKnown RBP8.82□□□□□ -1
RTTN-215ENST00000639487 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
RTTN-215ENST00000639487 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
RTTN-215ENST00000639487 CACNA1SQ13698 1873 aa8.81□□□□□ -1
RTTN-215ENST00000639487 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
RTTN-215ENST00000639487 CABP2Q9NPB3 220 aa8.81□□□□□ -1
RTTN-215ENST00000639487 IL2RBP14784 551 aa8.81□□□□□ -1
RTTN-215ENST00000639487 TRIM28Q13263 835 aaKnown RBP8.81□□□□□ -1
RTTN-215ENST00000639487 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
RTTN-215ENST00000639487 PANK3Q9H999 370 aa8.81□□□□□ -1
RTTN-215ENST00000639487 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
RTTN-215ENST00000639487 IFT57Q9NWB7 429 aa8.81□□□□□ -1
RTTN-215ENST00000639487 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
RTTN-215ENST00000639487 PHKG2P15735 406 aa8.8□□□□□ -1
RTTN-215ENST00000639487 AKAP11Q9UKA4 1901 aa8.8□□□□□ -1
RTTN-215ENST00000639487 IL27Q8NEV9 243 aa8.8□□□□□ -1
RTTN-215ENST00000639487 ARHGAP45Q92619 1136 aa8.8□□□□□ -1
RTTN-215ENST00000639487 SPG7Q9UQ90 795 aa8.79□□□□□ -1
RTTN-215ENST00000639487 SOCS7O14512 581 aa8.79□□□□□ -1
RTTN-215ENST00000639487 HAP1P54257 671 aaPredicted RBP8.79□□□□□ -1
RTTN-215ENST00000639487 PLA2G12BQ9BX93 195 aa8.79□□□□□ -1
RTTN-215ENST00000639487 PKNOX2Q96KN3 472 aa8.78□□□□□ -1
RTTN-215ENST00000639487 SLC12A5Q9H2X9 1139 aa8.78□□□□□ -1
RTTN-215ENST00000639487 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
RTTN-215ENST00000639487 SSFA2P28290 1259 aa8.77□□□□□ -1
RTTN-215ENST00000639487 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1
RTTN-215ENST00000639487 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
RTTN-215ENST00000639487 C15orf52Q6ZUT6 534 aaKnown RBP8.77□□□□□ -1.01
RTTN-215ENST00000639487 SIPA1L1O43166 1804 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 ATAD5Q96QE3 1844 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 CDHR2Q9BYE9 1310 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 CHL1O00533 1208 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 NFE2L2Q16236 605 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 KNSTRNQ9Y448 316 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
RTTN-215ENST00000639487 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
RTTN-215ENST00000639487 SRPK2P78362 688 aaKnown RBP8.75□□□□□ -1.01
RTTN-215ENST00000639487 CLEC4GQ6UXB4 293 aa8.75□□□□□ -1.01
RTTN-215ENST00000639487 NME9Q86XW9 330 aa8.75□□□□□ -1.01
RTTN-215ENST00000639487 FBXO3Q9UK99 471 aa8.75□□□□□ -1.01
RTTN-215ENST00000639487 PDIA4P13667 645 aaKnown RBP8.75□□□□□ -1.01
RTTN-215ENST00000639487 RXRBP28702 533 aa8.75□□□□□ -1.01
RTTN-215ENST00000639487 PLEKHO1Q53GL0 409 aaPredicted RBP8.74□□□□□ -1.01
RTTN-215ENST00000639487 NGDNQ8NEJ9 315 aaKnown RBP8.74□□□□□ -1.01
RTTN-215ENST00000639487 USP21Q9UK80 565 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 AXIN2Q9Y2T1 843 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 RFX7Q2KHR2 1363 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 OTOFQ9HC10 1997 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 NT5C2P49902 561 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 IFNL2Q8IZJ0 200 aa8.74□□□□□ -1.01
RTTN-215ENST00000639487 A0A087WZG4 1122 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 EYA1Q99502 592 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 SLC10A5Q5PT55 438 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 NAV1Q8NEY1 1877 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 DIAPH1O60610 1272 aaKnown RBP8.73□□□□□ -1.01
RTTN-215ENST00000639487 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
RTTN-215ENST00000639487 LRRC37A2A6NM11 1700 aa8.72□□□□□ -1.01
RTTN-215ENST00000639487 DOCK1Q14185 1865 aa8.72□□□□□ -1.01
RTTN-215ENST00000639487 ITGAEP38570 1179 aa8.72□□□□□ -1.01
RTTN-215ENST00000639487 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
RTTN-215ENST00000639487 FKBP1AP62942 108 aaKnown RBP8.71□□□□□ -1.01
RTTN-215ENST00000639487 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
RTTN-215ENST00000639487 COL11A1P12107 1806 aaPredicted RBP8.7□□□□□ -1.02
RTTN-215ENST00000639487 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
RTTN-215ENST00000639487 PTPRCP08575 1304 aa8.7□□□□□ -1.02
RTTN-215ENST00000639487 CHGAP10645 457 aaKnown RBP8.7□□□□□ -1.02
RTTN-215ENST00000639487 POTEAQ6S8J7 498 aa8.7□□□□□ -1.02
RTTN-215ENST00000639487 UPF1Q92900 1129 aaKnown RBP eCLIP8.7□□□□□ -1.02
RTTN-215ENST00000639487 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
RTTN-215ENST00000639487 IRS2Q9Y4H2 1338 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 TATP17735 454 aaPredicted RBP8.69□□□□□ -1.02
RTTN-215ENST00000639487 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
RTTN-215ENST00000639487 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 KRT27Q7Z3Y8 459 aa8.69□□□□□ -1.02
RTTN-215ENST00000639487 MARCH10Q8NA82 808 aaPredicted RBP8.69□□□□□ -1.02
RTTN-215ENST00000639487 IL6STP40189 918 aaPredicted RBP8.68□□□□□ -1.02
RTTN-215ENST00000639487 UNCXA6NJT0 531 aa8.68□□□□□ -1.02
RTTN-215ENST00000639487 CAPN2P17655 700 aa8.68□□□□□ -1.02
RTTN-215ENST00000639487 PDE4CQ08493 712 aa8.68□□□□□ -1.02
RTTN-215ENST00000639487 CYP27B1O15528 508 aa8.67□□□□□ -1.02
RTTN-215ENST00000639487 MAP4K4O95819 1239 aaPredicted RBP8.67□□□□□ -1.02
RTTN-215ENST00000639487 NLRP6P59044 892 aa8.67□□□□□ -1.02
RTTN-215ENST00000639487 FOXO3O43524 673 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms