RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 PCDH11XQ9BZA7 1347 aa7.72□□□□□ -1.17
PDE4D-229ENST00000638939 PCDH11YQ9BZA8 1340 aa7.72□□□□□ -1.17
PDE4D-229ENST00000638939 ST20-MTHFSA0A0A6YYL1 179 aa7.71□□□□□ -1.18
PDE4D-229ENST00000638939 RIOK3O14730 519 aaKnown RBP7.71□□□□□ -1.18
PDE4D-229ENST00000638939 PRIM1P49642 420 aaKnown RBP7.71□□□□□ -1.18
PDE4D-229ENST00000638939 LTV1Q96GA3 475 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-229ENST00000638939 N4BP2Q86UW6 1770 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-229ENST00000638939 SCN11AQ9UI33 1791 aa7.71□□□□□ -1.18
PDE4D-229ENST00000638939 HMGB2P26583 209 aaKnown RBP7.7□□□□□ -1.18
PDE4D-229ENST00000638939 CACNB1Q02641 598 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-229ENST00000638939 SYTL4Q96C24 671 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-229ENST00000638939 TFCP2L1Q9NZI6 479 aa7.7□□□□□ -1.18
PDE4D-229ENST00000638939 CCNL1Q9UK58 526 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-229ENST00000638939 PALLDQ8WX93 1383 aa7.7□□□□□ -1.18
PDE4D-229ENST00000638939 MYH14Q7Z406 1995 aaKnown RBP7.7□□□□□ -1.18
PDE4D-229ENST00000638939 FYB1O15117 783 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 TMF1P82094 1093 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 RRS1Q15050 365 aaKnown RBP7.69□□□□□ -1.18
PDE4D-229ENST00000638939 RAPGEF4Q8WZA2 1011 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 ADCY9O60503 1353 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 TJP1Q07157 1748 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 DLEC1Q9Y238 1755 aa7.69□□□□□ -1.18
PDE4D-229ENST00000638939 C1QTNF8P60827 252 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 GPR162Q16538 588 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 CDCA8Q53HL2 280 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 DCAF8Q5TAQ9 597 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 NLGN2Q8NFZ4 835 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
PDE4D-229ENST00000638939 TATP17735 454 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-229ENST00000638939 FBLN1P23142 703 aa7.67□□□□□ -1.18
PDE4D-229ENST00000638939 KCNQ4P56696 695 aa7.67□□□□□ -1.18
PDE4D-229ENST00000638939 COL23A1Q86Y22 540 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-229ENST00000638939 FLAD1Q8NFF5 587 aa7.67□□□□□ -1.18
PDE4D-229ENST00000638939 SPDYE1Q8NFV5 336 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-229ENST00000638939 GGNBP2Q9H3C7 697 aa7.67□□□□□ -1.18
PDE4D-229ENST00000638939 ADAMTS7Q9UKP4 1686 aa7.67□□□□□ -1.18
PDE4D-229ENST00000638939 SBF1O95248 1867 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-229ENST00000638939 HSP90AB2PQ58FF8 381 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 USHBP1Q8N6Y0 703 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 CD2APQ9Y5K6 639 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 KDRP35968 1356 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 ATP10DQ9P241 1426 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 TNRC6CQ9HCJ0 1690 aaKnown RBP7.66□□□□□ -1.18
PDE4D-229ENST00000638939 UBR2Q8IWV8 1755 aa7.66□□□□□ -1.18
PDE4D-229ENST00000638939 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
PDE4D-229ENST00000638939 CYP27B1O15528 508 aa7.65□□□□□ -1.18
PDE4D-229ENST00000638939 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
PDE4D-229ENST00000638939 SMARCC1Q92922 1105 aaPredicted RBP7.65□□□□□ -1.18
PDE4D-229ENST00000638939 AFDNP55196 1824 aaKnown RBP7.64□□□□□ -1.19
PDE4D-229ENST00000638939 STK25O00506 426 aa7.64□□□□□ -1.19
PDE4D-229ENST00000638939 NKX1-1Q15270 411 aaPredicted RBP7.64□□□□□ -1.19
PDE4D-229ENST00000638939 MSL1Q68DK7 614 aa7.64□□□□□ -1.19
PDE4D-229ENST00000638939 PELP1Q8IZL8 1130 aaKnown RBP7.64□□□□□ -1.19
PDE4D-229ENST00000638939 RBM42Q9BTD8 480 aaKnown RBP7.64□□□□□ -1.19
PDE4D-229ENST00000638939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDE4D-229ENST00000638939 WDR90Q96KV7 1748 aa7.64□□□□□ -1.19
PDE4D-229ENST00000638939 PXDNLA1KZ92 1463 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 C10orf71Q711Q0 1435 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 PCNTO95613 3336 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-229ENST00000638939 SSFA2P28290 1259 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 MPRIPQ6WCQ1 1025 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 AK7Q96M32 723 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 CARD14Q9BXL6 1004 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 EMILIN1Q9Y6C2 1016 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 CCDC88AQ3V6T2 1871 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 SIPA1L3O60292 1781 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-229ENST00000638939 TIAM2Q8IVF5 1701 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 NRXN2Q9P2S2 1712 aa7.63□□□□□ -1.19
PDE4D-229ENST00000638939 MRC1P22897 1456 aa7.62□□□□□ -1.19
PDE4D-229ENST00000638939 CHRM1P11229 460 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-229ENST00000638939 AMIGO3Q86WK7 504 aa7.62□□□□□ -1.19
PDE4D-229ENST00000638939 SPG7Q9UQ90 795 aa7.62□□□□□ -1.19
PDE4D-229ENST00000638939 SCN7AQ01118 1682 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 IGSF1Q8N6C5 1336 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 DICER1Q9UPY3 1922 aaKnown RBP7.61□□□□□ -1.19
PDE4D-229ENST00000638939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
PDE4D-229ENST00000638939 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 SIK1P57059 783 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 PIGBQ92521 554 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
PDE4D-229ENST00000638939 KDM6AO15550 1401 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-229ENST00000638939 CACNA1SQ13698 1873 aa7.6□□□□□ -1.19
PDE4D-229ENST00000638939 PHKG2P15735 406 aa7.6□□□□□ -1.19
PDE4D-229ENST00000638939 LINC00116Q8NCU8 138 aa7.6□□□□□ -1.19
PDE4D-229ENST00000638939 EYA1Q99502 592 aa7.6□□□□□ -1.19
PDE4D-229ENST00000638939 TMOD3Q9NYL9 352 aa7.6□□□□□ -1.19
PDE4D-229ENST00000638939 BCORQ6W2J9 1755 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 PHF14O94880 888 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 NUBP1P53384 320 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 ITPK1Q13572 414 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 IFNL2Q8IZJ0 200 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 POLKQ9UBT6 870 aa7.59□□□□□ -1.19
PDE4D-229ENST00000638939 CNTNAP4Q9C0A0 1308 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms