RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CYP27B1O15528 508 aa27.59■■■□□ 2.01
SCARB2-212ENST00000638663 IGHDP01880 384 aa27.59■■■□□ 2.01
SCARB2-212ENST00000638663 EIF4A1P60842 406 aaKnown RBP27.59■■■□□ 2.01
SCARB2-212ENST00000638663 SOS1Q07889 1333 aaPredicted RBP27.58■■■□□ 2.01
SCARB2-212ENST00000638663 KDM6AO15550 1401 aaPredicted RBP27.58■■■□□ 2.01
SCARB2-212ENST00000638663 CCDC30Q5VVM6 783 aa27.57■■■□□ 2
SCARB2-212ENST00000638663 NECTIN2Q92692 538 aa27.57■■■□□ 2
SCARB2-212ENST00000638663 UBAP1LF5GYI3 381 aa27.57■■■□□ 2
SCARB2-212ENST00000638663 STK31Q9BXU1 1019 aa27.57■■■□□ 2
SCARB2-212ENST00000638663 PARP4Q9UKK3 1724 aaKnown RBP27.56■■■□□ 2
SCARB2-212ENST00000638663 COL14A1Q05707 1796 aaKnown RBP27.55■■■□□ 2
SCARB2-212ENST00000638663 SCN11AQ9UI33 1791 aa27.55■■■□□ 2
SCARB2-212ENST00000638663 IL2RBP14784 551 aa27.55■■■□□ 2
SCARB2-212ENST00000638663 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
SCARB2-212ENST00000638663 PTPRCP08575 1304 aa27.55■■■□□ 2
SCARB2-212ENST00000638663 SIPA1L3O60292 1781 aaPredicted RBP27.54■■■□□ 2
SCARB2-212ENST00000638663 G2E3Q7L622 706 aa27.54■■■□□ 2
SCARB2-212ENST00000638663 ZCRB1Q8TBF4 217 aaKnown RBP27.54■■■□□ 2
SCARB2-212ENST00000638663 ZBTB40Q9NUA8 1239 aa27.54■■■□□ 2
SCARB2-212ENST00000638663 SKAP1Q86WV1 359 aa27.53■■■□□ 2
SCARB2-212ENST00000638663 DCAF5Q96JK2 942 aa27.53■■■□□ 2
SCARB2-212ENST00000638663 SLC52A2Q9HAB3 445 aa27.53■■■□□ 2
SCARB2-212ENST00000638663 USP35Q9P2H5 1018 aa27.53■■■□□ 2
SCARB2-212ENST00000638663 RGS12O14924 1447 aa27.53■■■□□ 2
SCARB2-212ENST00000638663 HDGFL1Q5TGJ6 251 aa27.52■■■□□ 2
SCARB2-212ENST00000638663 HSP90AB1P08238 724 aaKnown RBP27.51■■■□□ 2
SCARB2-212ENST00000638663 PCDH11XQ9BZA7 1347 aa27.51■■□□□ 1.99
SCARB2-212ENST00000638663 PCDH11YQ9BZA8 1340 aa27.51■■□□□ 1.99
SCARB2-212ENST00000638663 ZBTB7BO15156 539 aaPredicted RBP27.5■■□□□ 1.99
SCARB2-212ENST00000638663 HOXB7P09629 217 aa27.5■■□□□ 1.99
SCARB2-212ENST00000638663 NFATC2IPQ8NCF5 419 aa27.5■■□□□ 1.99
SCARB2-212ENST00000638663 ADAMTS2O95450 1211 aa27.49■■□□□ 1.99
SCARB2-212ENST00000638663 EIF2S2P20042 333 aaKnown RBP27.49■■□□□ 1.99
SCARB2-212ENST00000638663 RWDD1Q9H446 243 aaPredicted RBP27.49■■□□□ 1.99
SCARB2-212ENST00000638663 INTS3Q68E01 1043 aaKnown RBP27.47■■□□□ 1.99
SCARB2-212ENST00000638663 CHMP4BQ9H444 224 aaKnown RBP27.47■■□□□ 1.99
SCARB2-212ENST00000638663 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
SCARB2-212ENST00000638663 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
SCARB2-212ENST00000638663 FLIIQ13045 1269 aa27.47■■□□□ 1.99
SCARB2-212ENST00000638663 SLC39A6Q13433 755 aa27.47■■□□□ 1.99
SCARB2-212ENST00000638663 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
SCARB2-212ENST00000638663 MRC1P22897 1456 aa27.45■■□□□ 1.99
SCARB2-212ENST00000638663 GIGYF1O75420 1035 aaPredicted RBP27.45■■□□□ 1.98
SCARB2-212ENST00000638663 ZNF790Q6PG37 636 aa27.45■■□□□ 1.98
SCARB2-212ENST00000638663 DDX54Q8TDD1 881 aaKnown RBP27.45■■□□□ 1.98
SCARB2-212ENST00000638663 HEG1Q9ULI3 1381 aa27.45■■□□□ 1.98
SCARB2-212ENST00000638663 CABP4P57796 275 aa27.44■■□□□ 1.98
SCARB2-212ENST00000638663 F6X3S4 739 aa27.43■■□□□ 1.98
SCARB2-212ENST00000638663 FKBP5Q13451 457 aaPredicted RBP27.43■■□□□ 1.98
SCARB2-212ENST00000638663 CHMP4AQ9BY43 222 aa27.43■■□□□ 1.98
SCARB2-212ENST00000638663 CACNA1FO60840 1977 aa27.43■■□□□ 1.98
SCARB2-212ENST00000638663 CHPF2Q9P2E5 772 aa27.42■■□□□ 1.98
SCARB2-212ENST00000638663 SHANK3Q9BYB0 1731 aa27.42■■□□□ 1.98
SCARB2-212ENST00000638663 PRAMEF22A3QJZ6 481 aa27.41■■□□□ 1.98
SCARB2-212ENST00000638663 SLC4A10Q6U841 1118 aa27.41■■□□□ 1.98
SCARB2-212ENST00000638663 C1orf115Q9H7X2 142 aa27.41■■□□□ 1.98
SCARB2-212ENST00000638663 HDAC1Q13547 482 aaPredicted RBP27.41■■□□□ 1.98
SCARB2-212ENST00000638663 PHAXQ9H814 394 aaKnown RBP27.41■■□□□ 1.98
SCARB2-212ENST00000638663 PLCH1Q4KWH8 1693 aa27.4■■□□□ 1.98
SCARB2-212ENST00000638663 NKX1-1Q15270 411 aaPredicted RBP27.39■■□□□ 1.98
SCARB2-212ENST00000638663 TTC5Q8N0Z6 440 aa27.38■■□□□ 1.97
SCARB2-212ENST00000638663 ANXA1P04083 346 aa27.37■■□□□ 1.97
SCARB2-212ENST00000638663 RGS3P49796 1198 aa27.37■■□□□ 1.97
SCARB2-212ENST00000638663 DISP2A7MBM2 1401 aa27.36■■□□□ 1.97
SCARB2-212ENST00000638663 CCT4P50991 539 aaKnown RBP27.36■■□□□ 1.97
SCARB2-212ENST00000638663 CERKQ8TCT0 537 aa27.36■■□□□ 1.97
SCARB2-212ENST00000638663 ZNF496Q96IT1 587 aaPredicted RBP27.36■■□□□ 1.97
SCARB2-212ENST00000638663 RBM19Q9Y4C8 960 aaKnown RBP27.36■■□□□ 1.97
SCARB2-212ENST00000638663 ERVV-2B6SEH9 535 aa27.35■■□□□ 1.97
SCARB2-212ENST00000638663 DBF4Q9UBU7 674 aaPredicted RBP27.35■■□□□ 1.97
SCARB2-212ENST00000638663 MEIS3Q99687 375 aa27.33■■□□□ 1.97
SCARB2-212ENST00000638663 PDZRN3Q9UPQ7 1066 aa27.33■■□□□ 1.97
SCARB2-212ENST00000638663 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
SCARB2-212ENST00000638663 PROSER3Q2NL68 480 aa27.32■■□□□ 1.96
SCARB2-212ENST00000638663 FMNL2Q96PY5 1086 aa27.32■■□□□ 1.96
SCARB2-212ENST00000638663 C5P01031 1676 aa27.31■■□□□ 1.96
SCARB2-212ENST00000638663 JCADQ9P266 1359 aa27.31■■□□□ 1.96
SCARB2-212ENST00000638663 SNRPA1P09661 255 aaKnown RBP27.29■■□□□ 1.96
SCARB2-212ENST00000638663 SIRT2Q8IXJ6 389 aa27.29■■□□□ 1.96
SCARB2-212ENST00000638663 SPATA31A1Q5TZJ5 1347 aa27.29■■□□□ 1.96
SCARB2-212ENST00000638663 SMC5Q8IY18 1101 aa27.29■■□□□ 1.96
SCARB2-212ENST00000638663 SLIT2O94813 1529 aa27.28■■□□□ 1.96
SCARB2-212ENST00000638663 PXDNLA1KZ92 1463 aa27.28■■□□□ 1.96
SCARB2-212ENST00000638663 EXOC5O00471 708 aa27.28■■□□□ 1.96
SCARB2-212ENST00000638663 DDX21Q9NR30 783 aaKnown RBP eCLIP27.27■■□□□ 1.96
SCARB2-212ENST00000638663 HYPKQ9NX55 129 aa27.27■■□□□ 1.96
SCARB2-212ENST00000638663 TOGARAM1Q9Y4F4 1720 aa27.27■■□□□ 1.96
SCARB2-212ENST00000638663 PI4KAP2A4QPH2 592 aa27.26■■□□□ 1.95
SCARB2-212ENST00000638663 PI4KAP1Q8N8J0 262 aa27.26■■□□□ 1.95
SCARB2-212ENST00000638663 USP16Q9Y5T5 823 aa27.26■■□□□ 1.95
SCARB2-212ENST00000638663 WNK3Q9BYP7 1800 aa27.26■■□□□ 1.95
SCARB2-212ENST00000638663 PDIA6Q15084 440 aa27.26■■□□□ 1.95
SCARB2-212ENST00000638663 NWD2Q9ULI1 1742 aa27.25■■□□□ 1.95
SCARB2-212ENST00000638663 DNAAF4Q8WXU2 420 aa27.25■■□□□ 1.95
SCARB2-212ENST00000638663 TMOD3Q9NYL9 352 aa27.25■■□□□ 1.95
SCARB2-212ENST00000638663 THRAP3Q9Y2W1 955 aaKnown RBP27.25■■□□□ 1.95
SCARB2-212ENST00000638663 CCDC9Q9Y3X0 531 aaKnown RBP27.25■■□□□ 1.95
SCARB2-212ENST00000638663 ATP10DQ9P241 1426 aa27.24■■□□□ 1.95
SCARB2-212ENST00000638663 PDE4AP27815 886 aa27.24■■□□□ 1.95
SCARB2-212ENST00000638663 SPATA31A5Q5VU36 1347 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms