RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CCDC112Q8NEF3 446 aa19.72■□□□□ 0.75
SCARB2-210ENST00000638567 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
SCARB2-210ENST00000638567 PCMTD1Q96MG8 357 aaPredicted RBP19.72■□□□□ 0.75
SCARB2-210ENST00000638567 ZRANB1Q9UGI0 708 aa19.72■□□□□ 0.75
SCARB2-210ENST00000638567 KRT32Q14532 448 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 CFAP45Q9UL16 551 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 PDE1AP54750 535 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 PROSER2Q86WR7 435 aaPredicted RBP19.71■□□□□ 0.75
SCARB2-210ENST00000638567 CCDC8Q9H0W5 538 aaPredicted RBP19.71■□□□□ 0.75
SCARB2-210ENST00000638567 CCDC158Q5M9N0 1113 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 KRT24Q2M2I5 525 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 TEX35Q5T0J7 233 aa19.71■□□□□ 0.75
SCARB2-210ENST00000638567 FKBP4Q02790 459 aaKnown RBP eCLIP19.7■□□□□ 0.74
SCARB2-210ENST00000638567 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
SCARB2-210ENST00000638567 KDM6BO15054 1643 aa19.7■□□□□ 0.74
SCARB2-210ENST00000638567 FAM177BA6PVY3 158 aa19.69■□□□□ 0.74
SCARB2-210ENST00000638567 CABP4P57796 275 aa19.69■□□□□ 0.74
SCARB2-210ENST00000638567 RAB3GAP1Q15042 981 aa19.69■□□□□ 0.74
SCARB2-210ENST00000638567 RRP12Q5JTH9 1297 aaKnown RBP19.69■□□□□ 0.74
SCARB2-210ENST00000638567 TTC39AQ5SRH9 613 aa19.69■□□□□ 0.74
SCARB2-210ENST00000638567 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
SCARB2-210ENST00000638567 SH2B1Q9NRF2 756 aaPredicted RBP19.69■□□□□ 0.74
SCARB2-210ENST00000638567 ACEP12821 1306 aa19.68■□□□□ 0.74
SCARB2-210ENST00000638567 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
SCARB2-210ENST00000638567 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
SCARB2-210ENST00000638567 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
SCARB2-210ENST00000638567 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
SCARB2-210ENST00000638567 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
SCARB2-210ENST00000638567 INSRP06213 1382 aa19.68■□□□□ 0.74
SCARB2-210ENST00000638567 TTC21BQ7Z4L5 1316 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 STX6O43752 255 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 PDIA4P13667 645 aaKnown RBP19.67■□□□□ 0.74
SCARB2-210ENST00000638567 AMOTL2Q9Y2J4 779 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 GCC2Q8IWJ2 1684 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 ANXA1P04083 346 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
SCARB2-210ENST00000638567 SCAND2PQ9GZW5 306 aaPredicted RBP19.67■□□□□ 0.74
SCARB2-210ENST00000638567 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
SCARB2-210ENST00000638567 SERPINC1P01008 464 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
SCARB2-210ENST00000638567 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 JMYQ8N9B5 988 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 ECHDC1Q9NTX5 307 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 STK11IPQ8N1F8 1099 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 CEP126Q9P2H0 1117 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
SCARB2-210ENST00000638567 ZBTB7BO15156 539 aaPredicted RBP19.65■□□□□ 0.74
SCARB2-210ENST00000638567 CNNM1Q9NRU3 951 aa19.65■□□□□ 0.74
SCARB2-210ENST00000638567 CCDC47Q96A33 483 aaKnown RBP19.65■□□□□ 0.74
SCARB2-210ENST00000638567 TFIP11Q9UBB9 837 aaKnown RBP19.65■□□□□ 0.74
SCARB2-210ENST00000638567 PKNOX2Q96KN3 472 aa19.65■□□□□ 0.74
SCARB2-210ENST00000638567 ZGPATQ8N5A5 531 aaKnown RBP19.65■□□□□ 0.74
SCARB2-210ENST00000638567 ESYT1Q9BSJ8 1104 aa19.65■□□□□ 0.74
SCARB2-210ENST00000638567 DBF4Q9UBU7 674 aaPredicted RBP19.65■□□□□ 0.74
SCARB2-210ENST00000638567 CCDC57Q2TAC2 916 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 TTLL5Q6EMB2 1281 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 CCDC70Q6NSX1 233 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 CCDC85AQ96PX6 553 aaPredicted RBP19.64■□□□□ 0.73
SCARB2-210ENST00000638567 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
SCARB2-210ENST00000638567 XBP1P17861 261 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 GJB2P29033 226 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.73
SCARB2-210ENST00000638567 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
SCARB2-210ENST00000638567 EIF4A2Q14240 407 aaKnown RBP19.63■□□□□ 0.73
SCARB2-210ENST00000638567 CEP85Q6P2H3 762 aa19.63■□□□□ 0.73
SCARB2-210ENST00000638567 G3V3G9 751 aa19.63■□□□□ 0.73
SCARB2-210ENST00000638567 DCAF8Q5TAQ9 597 aa19.63■□□□□ 0.73
SCARB2-210ENST00000638567 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
SCARB2-210ENST00000638567 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
SCARB2-210ENST00000638567 ADCY5O95622 1261 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 KCNH5Q8NCM2 988 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 PRIM1P49642 420 aaKnown RBP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 PDE4CQ08493 712 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 KIF6Q6ZMV9 814 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 RBM33Q96EV2 1170 aaKnown RBP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 NOL10Q9BSC4 688 aaKnown RBP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
SCARB2-210ENST00000638567 RBM25P49756 843 aaKnown RBP19.62■□□□□ 0.73
SCARB2-210ENST00000638567 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
SCARB2-210ENST00000638567 MYD88Q99836 296 aa19.61■□□□□ 0.73
SCARB2-210ENST00000638567 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
SCARB2-210ENST00000638567 BRMS1Q9HCU9 246 aa19.61■□□□□ 0.73
SCARB2-210ENST00000638567 MTMR7Q9Y216 660 aa19.61■□□□□ 0.73
SCARB2-210ENST00000638567 FAM177A1Q8N128 213 aaPredicted RBP19.61■□□□□ 0.73
SCARB2-210ENST00000638567 PDCL2Q8N4E4 241 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 ANKLE2Q86XL3 938 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 UBE2HP62256 183 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 GUCY1B3Q02153 619 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 EVI5LQ96CN4 794 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 PIK3R4Q99570 1358 aa19.6■□□□□ 0.73
SCARB2-210ENST00000638567 RAD21O60216 631 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms