RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 LETM1O95202 739 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-208ENST00000638372 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-208ENST00000638372 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 ZBTB3Q9H5J0 574 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 JARID2Q92833 1246 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-208ENST00000638372 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
SCARB2-208ENST00000638372 IKQ13123 557 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-208ENST00000638372 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
SCARB2-208ENST00000638372 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
SCARB2-208ENST00000638372 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-208ENST00000638372 DISP1Q96F81 1524 aa17.02■□□□□ 0.31
SCARB2-208ENST00000638372 SMC2O95347 1197 aa17.02■□□□□ 0.31
SCARB2-208ENST00000638372 KRT32Q14532 448 aa17.02■□□□□ 0.31
SCARB2-208ENST00000638372 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-208ENST00000638372 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 LRP2BPQ9P2M1 347 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 SSFA2P28290 1259 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 TDO2P48775 406 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 TRIM22Q8IYM9 498 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
SCARB2-208ENST00000638372 CCDC173Q0VFZ6 552 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
SCARB2-208ENST00000638372 TBC1D32Q96NH3 1257 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 RAI14Q9P0K7 980 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
SCARB2-208ENST00000638372 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
SCARB2-208ENST00000638372 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
SCARB2-208ENST00000638372 SYCE3A1L190 88 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-208ENST00000638372 KAT6BQ8WYB5 2073 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 GPTP24298 496 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
SCARB2-208ENST00000638372 JMYQ8N9B5 988 aa16.98■□□□□ 0.31
SCARB2-208ENST00000638372 ECHDC1Q9NTX5 307 aa16.98■□□□□ 0.31
SCARB2-208ENST00000638372 RIMS2Q9UQ26 1411 aa16.98■□□□□ 0.31
SCARB2-208ENST00000638372 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-208ENST00000638372 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
SCARB2-208ENST00000638372 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
SCARB2-208ENST00000638372 NUCB1Q02818 461 aa16.97■□□□□ 0.31
SCARB2-208ENST00000638372 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
SCARB2-208ENST00000638372 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
SCARB2-208ENST00000638372 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
SCARB2-208ENST00000638372 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
SCARB2-208ENST00000638372 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
SCARB2-208ENST00000638372 VAMP4O75379 141 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 UBAC1Q9BSL1 405 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 TTLL5Q6EMB2 1281 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 MNS1Q8NEH6 495 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 PIBF1Q8WXW3 757 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
SCARB2-208ENST00000638372 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
SCARB2-208ENST00000638372 SDSP20132 328 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-208ENST00000638372 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
SCARB2-208ENST00000638372 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 SHANK2Q9UPX8 1470 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
SCARB2-208ENST00000638372 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
SCARB2-208ENST00000638372 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
SCARB2-208ENST00000638372 CAMK4Q16566 473 aa16.94■□□□□ 0.3
SCARB2-208ENST00000638372 RHPN1Q8TCX5 695 aa16.94■□□□□ 0.3
SCARB2-208ENST00000638372 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
SCARB2-208ENST00000638372 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-208ENST00000638372 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
SCARB2-208ENST00000638372 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
SCARB2-208ENST00000638372 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 GUCY1B3Q02153 619 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
SCARB2-208ENST00000638372 LIMCH1Q9UPQ0 1083 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms