RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 NLGN1Q8N2Q7 840 aa14.37□□□□□ -0.11
CHD2-229ENST00000637789 RASSF10A6NK89 507 aa14.36□□□□□ -0.11
CHD2-229ENST00000637789 TMF1P82094 1093 aa14.36□□□□□ -0.11
CHD2-229ENST00000637789 MPRIPQ6WCQ1 1025 aa14.36□□□□□ -0.11
CHD2-229ENST00000637789 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
CHD2-229ENST00000637789 WDR33Q9C0J8 1336 aaKnown RBP14.36□□□□□ -0.11
CHD2-229ENST00000637789 MEGF6O75095 1541 aa14.36□□□□□ -0.11
CHD2-229ENST00000637789 DEFB115Q30KQ5 88 aa14.35□□□□□ -0.11
CHD2-229ENST00000637789 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
CHD2-229ENST00000637789 FAM208AQ9UK61 1670 aaKnown RBP14.34□□□□□ -0.11
CHD2-229ENST00000637789 CHRNA5P30532 468 aa14.34□□□□□ -0.11
CHD2-229ENST00000637789 DPY19L2Q6NUT2 758 aa14.34□□□□□ -0.11
CHD2-229ENST00000637789 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
CHD2-229ENST00000637789 TSKSQ9UJT2 592 aa14.34□□□□□ -0.11
CHD2-229ENST00000637789 LTV1Q96GA3 475 aaPredicted RBP14.33□□□□□ -0.12
CHD2-229ENST00000637789 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
CHD2-229ENST00000637789 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
CHD2-229ENST00000637789 SOX10P56693 466 aa14.32□□□□□ -0.12
CHD2-229ENST00000637789 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
CHD2-229ENST00000637789 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
CHD2-229ENST00000637789 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
CHD2-229ENST00000637789 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
CHD2-229ENST00000637789 DGKZQ13574 1117 aa14.31□□□□□ -0.12
CHD2-229ENST00000637789 GYS1P13807 737 aa14.3□□□□□ -0.12
CHD2-229ENST00000637789 ITPK1Q13572 414 aa14.3□□□□□ -0.12
CHD2-229ENST00000637789 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
CHD2-229ENST00000637789 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
CHD2-229ENST00000637789 LOC102724428A0A0B4J2F2 783 aa14.29□□□□□ -0.12
CHD2-229ENST00000637789 SIK1P57059 783 aa14.29□□□□□ -0.12
CHD2-229ENST00000637789 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
CHD2-229ENST00000637789 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
CHD2-229ENST00000637789 PPARGC1BQ86YN6 1023 aaKnown RBP14.29□□□□□ -0.12
CHD2-229ENST00000637789 ITGB4P16144 1822 aa14.28□□□□□ -0.12
CHD2-229ENST00000637789 IP6K1Q92551 441 aa14.28□□□□□ -0.12
CHD2-229ENST00000637789 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
CHD2-229ENST00000637789 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
CHD2-229ENST00000637789 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
CHD2-229ENST00000637789 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.12
CHD2-229ENST00000637789 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
CHD2-229ENST00000637789 NFKBIEO00221 500 aa14.27□□□□□ -0.13
CHD2-229ENST00000637789 HABP4Q5JVS0 413 aaKnown RBP14.27□□□□□ -0.13
CHD2-229ENST00000637789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.27□□□□□ -0.131e-7■□□□□ 8.7
CHD2-229ENST00000637789 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.13
CHD2-229ENST00000637789 PIGBQ92521 554 aa14.26□□□□□ -0.13
CHD2-229ENST00000637789 STAC3Q96MF2 364 aa14.26□□□□□ -0.13
CHD2-229ENST00000637789 ABT1Q9ULW3 272 aaKnown RBP14.26□□□□□ -0.13
CHD2-229ENST00000637789 RTCBQ9Y3I0 505 aaKnown RBP14.26□□□□□ -0.13
CHD2-229ENST00000637789 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
CHD2-229ENST00000637789 DLL1O00548 723 aa14.25□□□□□ -0.13
CHD2-229ENST00000637789 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
CHD2-229ENST00000637789 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
CHD2-229ENST00000637789 NME9Q86XW9 330 aa14.25□□□□□ -0.13
CHD2-229ENST00000637789 CAPNS2Q96L46 248 aa14.24□□□□□ -0.13
CHD2-229ENST00000637789 GPR101Q96P66 508 aaPredicted RBP14.24□□□□□ -0.13
CHD2-229ENST00000637789 DDR1Q08345 913 aa14.23□□□□□ -0.13
CHD2-229ENST00000637789 GRM1Q13255 1194 aa14.23□□□□□ -0.13
CHD2-229ENST00000637789 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
CHD2-229ENST00000637789 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 MON2Q7Z3U7 1717 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 RFC4P35249 363 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 NBPF1Q3BBV0 1214 aa14.22□□□□□ -0.13
CHD2-229ENST00000637789 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
CHD2-229ENST00000637789 TAF1DQ9H5J8 278 aaPredicted RBP14.22□□□□□ -0.13
CHD2-229ENST00000637789 ADRA2BP18089 450 aa14.21□□□□□ -0.13
CHD2-229ENST00000637789 CYP4F22Q6NT55 531 aa14.21□□□□□ -0.13
CHD2-229ENST00000637789 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
CHD2-229ENST00000637789 IQCA1LA6NCM1 817 aa14.2□□□□□ -0.14
CHD2-229ENST00000637789 CYP27B1O15528 508 aa14.2□□□□□ -0.14
CHD2-229ENST00000637789 ECE1P42892 770 aa14.2□□□□□ -0.14
CHD2-229ENST00000637789 EAPPQ56P03 285 aaPredicted RBP14.2□□□□□ -0.14
CHD2-229ENST00000637789 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
CHD2-229ENST00000637789 CD163L1Q9NR16 1453 aa14.19□□□□□ -0.14
CHD2-229ENST00000637789 RAPGEF4Q8WZA2 1011 aa14.19□□□□□ -0.14
CHD2-229ENST00000637789 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
CHD2-229ENST00000637789 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
CHD2-229ENST00000637789 ADAMTSL1Q8N6G6 1762 aa14.19□□□□□ -0.14
CHD2-229ENST00000637789 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 SCN4AP35499 1836 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 CA12O43570 354 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 AOC2O75106 756 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 TATP17735 454 aaPredicted RBP14.18□□□□□ -0.14
CHD2-229ENST00000637789 FKBP8Q14318 412 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 TTLL6Q8N841 843 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 DLEC1Q9Y238 1755 aa14.18□□□□□ -0.14
CHD2-229ENST00000637789 HOXC9P31274 260 aa14.17□□□□□ -0.14
CHD2-229ENST00000637789 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.145e-6■□□□□ 10
CHD2-229ENST00000637789 MAP1SQ66K74 1059 aaPredicted RBP14.17□□□□□ -0.14
CHD2-229ENST00000637789 NBPF15Q8N660 670 aa14.17□□□□□ -0.14
CHD2-229ENST00000637789 SRP68Q9UHB9 627 aaKnown RBP14.17□□□□□ -0.14
CHD2-229ENST00000637789 POLRMTO00411 1230 aaKnown RBP14.16□□□□□ -0.14
CHD2-229ENST00000637789 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
CHD2-229ENST00000637789 MAP2K2P36507 400 aa14.16□□□□□ -0.14
CHD2-229ENST00000637789 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
CHD2-229ENST00000637789 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
CHD2-229ENST00000637789 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms