RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 GBP3Q9H0R5 595 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 TSNARE1Q96NA8 513 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 FKBP15Q5T1M5 1219 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 RAB34Q9BZG1 259 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 DNA2P51530 1060 aa22.12■■□□□ 1.13
CACNA1A-246ENST00000637736 FILIP1Q7Z7B0 1213 aa22.12■■□□□ 1.13
CACNA1A-246ENST00000637736 CRACR2BQ8N4Y2 399 aaPredicted RBP22.12■■□□□ 1.13
CACNA1A-246ENST00000637736 NUP62CLQ9H1M0 184 aa22.12■■□□□ 1.13
CACNA1A-246ENST00000637736 RNF187Q5TA31 235 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 STARD3NLO95772 234 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 TXNDC2Q86VQ3 553 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 PDRG1Q9NUG6 133 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 LMAN1P49257 510 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 U3KPZ7 1027 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 TAOK3Q9H2K8 898 aa22.11■■□□□ 1.13
CACNA1A-246ENST00000637736 AIDAQ96BJ3 306 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 LIG1P18858 919 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 CEP126Q9P2H0 1117 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 EHMT1Q9H9B1 1298 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 UBXN4Q92575 508 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 KIF2AO00139 706 aaPredicted RBP22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 ARL1P40616 181 aaPredicted RBP22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 CCDC196A0A1B0GTZ2 297 aa22.1■■□□□ 1.13
CACNA1A-246ENST00000637736 BICDL1Q6ZP65 573 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 FERMT1Q9BQL6 677 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 AKAP2Q9Y2D5 859 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 DDX11Q96FC9 970 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 ZNF530Q6P9A1 599 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 SPECC1Q5M775 1068 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
CACNA1A-246ENST00000637736 KLHL10Q6JEL2 608 aa22.08■■□□□ 1.13
CACNA1A-246ENST00000637736 KIF5CO60282 957 aa22.08■■□□□ 1.12
CACNA1A-246ENST00000637736 POLR3DP05423 398 aaPredicted RBP22.08■■□□□ 1.12
CACNA1A-246ENST00000637736 RAB3IL1Q8TBN0 382 aa22.08■■□□□ 1.12
CACNA1A-246ENST00000637736 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 CAVIN4Q5BKX8 364 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 TIGD1Q96MW7 591 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 CCDC175P0C221 793 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 MKNK2Q9HBH9 465 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 ABCF2Q9UG63 623 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 PDZRN3Q9UPQ7 1066 aa22.07■■□□□ 1.12
CACNA1A-246ENST00000637736 CUL5Q93034 780 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 SRGAP3O43295 1099 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 FSD2A1L4K1 749 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 CWC27Q6UX04 472 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 ZNF354CQ86Y25 554 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 PPP1R14CQ8TAE6 165 aa22.06■■□□□ 1.12
CACNA1A-246ENST00000637736 EHBP1L1Q8N3D4 1523 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 ZPR1O75312 459 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 JAKMIP1Q96N16 626 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 MAP3K11Q16584 847 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 ZSCAN12O43309 604 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 MICALCLQ6ZW33 695 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 IDH1O75874 414 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 TMEM266Q2M3C6 531 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 RGS22Q8NE09 1264 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 WDR63Q8IWG1 891 aa22.05■■□□□ 1.12
CACNA1A-246ENST00000637736 SLF2Q8IX21 1173 aa22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 CHD1LQ86WJ1 897 aa22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 CASTP20810 708 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 CFAP65Q6ZU64 1925 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 CETN1Q12798 172 aa22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 PUF60Q9UHX1 559 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-246ENST00000637736 C6orf163Q5TEZ5 329 aa22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 CDK19Q9BWU1 502 aa22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 SREK1Q8WXA9 508 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 PIP4K2BP78356 416 aa22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 KIF20AO95235 890 aa22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 ANKIB1Q9P2G1 1089 aa22.03■■□□□ 1.12
CACNA1A-246ENST00000637736 MINDY4BA8MYZ0 360 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 HLTFQ14527 1009 aaKnown RBP eCLIP22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 IKBKGQ9Y6K9 419 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 CCDC96Q2M329 555 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 APBB1IPQ7Z5R6 666 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 MAP3K9P80192 1104 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 PRPF4BQ13523 1007 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-246ENST00000637736 PAFAH1B1P43034 410 aa22.02■■□□□ 1.11
CACNA1A-246ENST00000637736 HFM1A2PYH4 1435 aa22.02■■□□□ 1.11
CACNA1A-246ENST00000637736 RTEL1-TNFRSF6BF6WH68 1400 aa22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 POGZQ7Z3K3 1410 aa22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 PPP2R1AP30153 589 aa22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 NUP88Q99567 741 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 CAMK4Q16566 473 aa22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 TDRD12Q587J7 1177 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-246ENST00000637736 KIF4BQ2VIQ3 1234 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms