RNA–Protein interactions for RNA: ENST00000637438.1

LINC00598-213, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,456 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-213ENST00000637438 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
LINC00598-213ENST00000637438 MRC1P22897 1456 aa11.8□□□□□ -0.52
LINC00598-213ENST00000637438 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
LINC00598-213ENST00000637438 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
LINC00598-213ENST00000637438 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
LINC00598-213ENST00000637438 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
LINC00598-213ENST00000637438 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
LINC00598-213ENST00000637438 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
LINC00598-213ENST00000637438 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
LINC00598-213ENST00000637438 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
LINC00598-213ENST00000637438 ATRNO75882 1429 aa11.79□□□□□ -0.52
LINC00598-213ENST00000637438 EXOC5O00471 708 aa11.78□□□□□ -0.52
LINC00598-213ENST00000637438 CYP27B1O15528 508 aa11.78□□□□□ -0.52
LINC00598-213ENST00000637438 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-213ENST00000637438 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
LINC00598-213ENST00000637438 TRPC5Q9UL62 973 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-213ENST00000637438 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
LINC00598-213ENST00000637438 CHL1O00533 1208 aa11.77□□□□□ -0.52
LINC00598-213ENST00000637438 NEFLP07196 543 aa11.77□□□□□ -0.52
LINC00598-213ENST00000637438 DDB1Q16531 1140 aa11.77□□□□□ -0.52
LINC00598-213ENST00000637438 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.52
LINC00598-213ENST00000637438 GLI3P10071 1580 aa11.77□□□□□ -0.53
LINC00598-213ENST00000637438 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
LINC00598-213ENST00000637438 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
LINC00598-213ENST00000637438 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
LINC00598-213ENST00000637438 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
LINC00598-213ENST00000637438 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
LINC00598-213ENST00000637438 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
LINC00598-213ENST00000637438 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
LINC00598-213ENST00000637438 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
LINC00598-213ENST00000637438 DOT1LQ8TEK3 1739 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 A0A0G2JS52 829 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 MYT1Q01538 1121 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 FAM98CQ17RN3 349 aaKnown RBP11.75□□□□□ -0.53
LINC00598-213ENST00000637438 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-213ENST00000637438 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-213ENST00000637438 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
LINC00598-213ENST00000637438 ITGB4P16144 1822 aa11.75□□□□□ -0.53
LINC00598-213ENST00000637438 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
LINC00598-213ENST00000637438 CABP4P57796 275 aa11.74□□□□□ -0.53
LINC00598-213ENST00000637438 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.74□□□□□ -0.53
LINC00598-213ENST00000637438 KAT6BQ8WYB5 2073 aa11.74□□□□□ -0.53
LINC00598-213ENST00000637438 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
LINC00598-213ENST00000637438 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
LINC00598-213ENST00000637438 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
LINC00598-213ENST00000637438 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
LINC00598-213ENST00000637438 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
LINC00598-213ENST00000637438 QTRT2Q9H974 415 aaKnown RBP11.72□□□□□ -0.53
LINC00598-213ENST00000637438 MIS18AQ9NYP9 233 aa11.72□□□□□ -0.53
LINC00598-213ENST00000637438 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
LINC00598-213ENST00000637438 RRP1P56182 461 aaKnown RBP11.71□□□□□ -0.53
LINC00598-213ENST00000637438 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
LINC00598-213ENST00000637438 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
LINC00598-213ENST00000637438 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.53
LINC00598-213ENST00000637438 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
LINC00598-213ENST00000637438 UBR2Q8IWV8 1755 aa11.71□□□□□ -0.53
LINC00598-213ENST00000637438 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 HOXB7P09629 217 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
LINC00598-213ENST00000637438 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 VAMP4O75379 141 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
LINC00598-213ENST00000637438 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
LINC00598-213ENST00000637438 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
LINC00598-213ENST00000637438 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
LINC00598-213ENST00000637438 TSPYL6Q8N831 410 aa11.69□□□□□ -0.54
LINC00598-213ENST00000637438 BCL9O00512 1426 aa11.68□□□□□ -0.54
LINC00598-213ENST00000637438 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
LINC00598-213ENST00000637438 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
LINC00598-213ENST00000637438 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
LINC00598-213ENST00000637438 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
LINC00598-213ENST00000637438 C5P01031 1676 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 NHSQ6T4R5 1651 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 BCAR3O75815 825 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 SSH1Q8WYL5 1049 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
LINC00598-213ENST00000637438 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
LINC00598-213ENST00000637438 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
LINC00598-213ENST00000637438 MS4A1P11836 297 aa11.66□□□□□ -0.54
LINC00598-213ENST00000637438 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
LINC00598-213ENST00000637438 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
LINC00598-213ENST00000637438 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
LINC00598-213ENST00000637438 KCPQ6ZWJ8 1503 aa11.66□□□□□ -0.54
LINC00598-213ENST00000637438 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
LINC00598-213ENST00000637438 HEG1Q9ULI3 1381 aa11.65□□□□□ -0.54
LINC00598-213ENST00000637438 KCNQ3O43525 872 aa11.65□□□□□ -0.54
LINC00598-213ENST00000637438 ZKSCAN2Q63HK3 967 aa11.65□□□□□ -0.54
LINC00598-213ENST00000637438 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
LINC00598-213ENST00000637438 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
LINC00598-213ENST00000637438 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
LINC00598-213ENST00000637438 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms