RNA–Protein interactions for RNA: ENST00000630701.1

APOC3-205, Transcript of apolipoprotein C3, humanhuman

TSL 1 (best) BASIC

Gene APOC3, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-205ENST00000630701 TRIM37O94972 964 aa27.39■■□□□ 1.98
APOC3-205ENST00000630701 VIRMAQ69YN4 1812 aaKnown RBP27.38■■□□□ 1.97
APOC3-205ENST00000630701 SBF2Q86WG5 1849 aa27.38■■□□□ 1.97
APOC3-205ENST00000630701 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
APOC3-205ENST00000630701 BTBD11A6QL63 1104 aa27.37■■□□□ 1.97
APOC3-205ENST00000630701 CFAP44Q96MT7 982 aa27.37■■□□□ 1.97
APOC3-205ENST00000630701 IFT57Q9NWB7 429 aa27.37■■□□□ 1.97
APOC3-205ENST00000630701 GNAI1P63096 354 aa27.36■■□□□ 1.97
APOC3-205ENST00000630701 ITGB4P16144 1822 aa27.36■■□□□ 1.97
APOC3-205ENST00000630701 CHL1O00533 1208 aa27.35■■□□□ 1.97
APOC3-205ENST00000630701 ZNF853P0CG23 659 aa27.35■■□□□ 1.97
APOC3-205ENST00000630701 PTF1AQ7RTS3 328 aa27.35■■□□□ 1.97
APOC3-205ENST00000630701 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
APOC3-205ENST00000630701 GOLGA2Q08379 1002 aa27.34■■□□□ 1.97
APOC3-205ENST00000630701 SMARCC1Q92922 1105 aaPredicted RBP27.34■■□□□ 1.97
APOC3-205ENST00000630701 LAS1LQ9Y4W2 734 aaKnown RBP27.34■■□□□ 1.97
APOC3-205ENST00000630701 ILDR2Q71H61 639 aa27.33■■□□□ 1.97
APOC3-205ENST00000630701 ATG3Q9NT62 314 aa27.33■■□□□ 1.97
APOC3-205ENST00000630701 TSPYL4Q9UJ04 414 aa27.33■■□□□ 1.97
APOC3-205ENST00000630701 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
APOC3-205ENST00000630701 YTHDC1Q96MU7 727 aaKnown RBP27.32■■□□□ 1.96
APOC3-205ENST00000630701 ASAP1Q9ULH1 1129 aa27.32■■□□□ 1.96
APOC3-205ENST00000630701 KAT6BQ8WYB5 2073 aa27.31■■□□□ 1.96
APOC3-205ENST00000630701 CCDC125Q86Z20 511 aa27.31■■□□□ 1.96
APOC3-205ENST00000630701 TTC5Q8N0Z6 440 aa27.31■■□□□ 1.96
APOC3-205ENST00000630701 MIS18AQ9NYP9 233 aa27.31■■□□□ 1.96
APOC3-205ENST00000630701 SLC39A6Q13433 755 aa27.3■■□□□ 1.96
APOC3-205ENST00000630701 MYH16Q9H6N6 1097 aa27.3■■□□□ 1.96
APOC3-205ENST00000630701 E9PSI1 815 aa27.29■■□□□ 1.96
APOC3-205ENST00000630701 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
APOC3-205ENST00000630701 MBIPQ9NS73 344 aa27.29■■□□□ 1.96
APOC3-205ENST00000630701 BTAF1O14981 1849 aa27.28■■□□□ 1.96
APOC3-205ENST00000630701 EP400Q96L91 3159 aa27.28■■□□□ 1.96
APOC3-205ENST00000630701 PALLDQ8WX93 1383 aa27.27■■□□□ 1.96
APOC3-205ENST00000630701 APBA3O96018 575 aa27.27■■□□□ 1.96
APOC3-205ENST00000630701 SPINK5Q9NQ38 1064 aaPredicted RBP27.27■■□□□ 1.96
APOC3-205ENST00000630701 PAPPAQ13219 1627 aa27.27■■□□□ 1.96
APOC3-205ENST00000630701 PLSCR1O15162 318 aa27.26■■□□□ 1.95
APOC3-205ENST00000630701 SLFN5Q08AF3 891 aa27.26■■□□□ 1.95
APOC3-205ENST00000630701 KCNQ3O43525 872 aa27.25■■□□□ 1.95
APOC3-205ENST00000630701 CDCA7LQ96GN5 454 aa27.24■■□□□ 1.95
APOC3-205ENST00000630701 FMNL2Q96PY5 1086 aa27.24■■□□□ 1.95
APOC3-205ENST00000630701 KDM3BQ7LBC6 1761 aa27.24■■□□□ 1.95
APOC3-205ENST00000630701 TNS1Q9HBL0 1735 aaKnown RBP27.24■■□□□ 1.95
APOC3-205ENST00000630701 FANCIQ9NVI1 1328 aa27.23■■□□□ 1.95
APOC3-205ENST00000630701 EIF4A1P60842 406 aaKnown RBP27.23■■□□□ 1.95
APOC3-205ENST00000630701 TSR2Q969E8 191 aaKnown RBP27.23■■□□□ 1.95
APOC3-205ENST00000630701 ZNF496Q96IT1 587 aaPredicted RBP27.23■■□□□ 1.95
APOC3-205ENST00000630701 PTCD1O75127 700 aaKnown RBP27.22■■□□□ 1.95
APOC3-205ENST00000630701 TRMT2AQ8IZ69 625 aaKnown RBP27.22■■□□□ 1.95
APOC3-205ENST00000630701 KCPQ6ZWJ8 1503 aa27.21■■□□□ 1.95
APOC3-205ENST00000630701 LOC102724428A0A0B4J2F2 783 aa27.21■■□□□ 1.95
APOC3-205ENST00000630701 BAG6P46379 1132 aa27.21■■□□□ 1.95
APOC3-205ENST00000630701 SIK1P57059 783 aa27.21■■□□□ 1.95
APOC3-205ENST00000630701 VSIG10Q8N0Z9 540 aa27.21■■□□□ 1.95
APOC3-205ENST00000630701 RBM42Q9BTD8 480 aaKnown RBP27.21■■□□□ 1.95
APOC3-205ENST00000630701 UPF1Q92900 1129 aaKnown RBP eCLIP27.2■■□□□ 1.943e-13■■□□□ 12.2
APOC3-205ENST00000630701 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.94
APOC3-205ENST00000630701 HEG1Q9ULI3 1381 aa27.19■■□□□ 1.94
APOC3-205ENST00000630701 SLC27A3Q5K4L6 730 aa27.18■■□□□ 1.94
APOC3-205ENST00000630701 SNRPA1P09661 255 aaKnown RBP27.17■■□□□ 1.94
APOC3-205ENST00000630701 DUSP27Q5VZP5 1158 aa27.17■■□□□ 1.94
APOC3-205ENST00000630701 HMGB2P26583 209 aaKnown RBP27.16■■□□□ 1.94
APOC3-205ENST00000630701 TEX13AQ9BXU3 409 aaPredicted RBP27.16■■□□□ 1.94
APOC3-205ENST00000630701 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
APOC3-205ENST00000630701 RGPD3A6NKT7 1758 aaPredicted RBP27.15■■□□□ 1.94
APOC3-205ENST00000630701 RGPD4Q7Z3J3 1758 aa27.15■■□□□ 1.94
APOC3-205ENST00000630701 GIGYF1O75420 1035 aaPredicted RBP27.15■■□□□ 1.94
APOC3-205ENST00000630701 ATP6V1AP38606 617 aa27.15■■□□□ 1.94
APOC3-205ENST00000630701 SLC4A9Q96Q91 983 aa27.15■■□□□ 1.94
APOC3-205ENST00000630701 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
APOC3-205ENST00000630701 LY75O60449 1722 aa27.15■■□□□ 1.94
APOC3-205ENST00000630701 SOS1Q07889 1333 aaPredicted RBP27.15■■□□□ 1.94
APOC3-205ENST00000630701 HOXB7P09629 217 aa27.14■■□□□ 1.94
APOC3-205ENST00000630701 TXNRD1Q16881 649 aa27.14■■□□□ 1.94
APOC3-205ENST00000630701 EN1Q05925 392 aaPredicted RBP27.13■■□□□ 1.93
APOC3-205ENST00000630701 EXOSC9Q06265 439 aaKnown RBP27.13■■□□□ 1.93
APOC3-205ENST00000630701 ZNF831Q5JPB2 1677 aa27.13■■□□□ 1.93
APOC3-205ENST00000630701 KRT24Q2M2I5 525 aa27.12■■□□□ 1.93
APOC3-205ENST00000630701 PROM2Q8N271 834 aa27.12■■□□□ 1.93
APOC3-205ENST00000630701 C8orf58Q8NAV2 365 aa27.12■■□□□ 1.93
APOC3-205ENST00000630701 DEFB132Q7Z7B7 95 aa27.11■■□□□ 1.93
APOC3-205ENST00000630701 DNAJC10Q8IXB1 793 aa27.1■■□□□ 1.93
APOC3-205ENST00000630701 CHMP4AQ9BY43 222 aa27.1■■□□□ 1.93
APOC3-205ENST00000630701 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
APOC3-205ENST00000630701 STARD3NLO95772 234 aa27.09■■□□□ 1.93
APOC3-205ENST00000630701 ITPK1Q13572 414 aa27.09■■□□□ 1.93
APOC3-205ENST00000630701 EZH2Q15910 746 aaKnown RBP27.09■■□□□ 1.93
APOC3-205ENST00000630701 TWISTNBQ3B726 338 aaPredicted RBP27.09■■□□□ 1.93
APOC3-205ENST00000630701 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
APOC3-205ENST00000630701 LRRC4BQ9NT99 713 aa27.09■■□□□ 1.93
APOC3-205ENST00000630701 ELL2O00472 640 aaPredicted RBP27.08■■□□□ 1.93
APOC3-205ENST00000630701 PRAMEF22A3QJZ6 481 aa27.07■■□□□ 1.92
APOC3-205ENST00000630701 CT47B1P0C2W7 299 aaPredicted RBP27.07■■□□□ 1.92
APOC3-205ENST00000630701 KCNQ4P56696 695 aa27.07■■□□□ 1.92
APOC3-205ENST00000630701 USP16Q9Y5T5 823 aa27.07■■□□□ 1.92
APOC3-205ENST00000630701 CYP19A1P11511 503 aaPredicted RBP27.06■■□□□ 1.92
APOC3-205ENST00000630701 TJP1Q07157 1748 aa27.05■■□□□ 1.92
APOC3-205ENST00000630701 VAMP4O75379 141 aa27.05■■□□□ 1.92
APOC3-205ENST00000630701 LINC00116Q8NCU8 138 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms