RNA–Protein interactions for RNA: ENST00000630255.2

DDX3X-219, Transcript of DEAD-box helicase 3 X-linked, human

TSL 5

Gene DDX3X, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX3X-219	ENST00000630255	BRD1	O95696	1058 aa		12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	CHD2	O14647	1828 aa	Known RBP	12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	MARF1	Q9Y4F3	1742 aa	Known RBP	12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	ERC2	O15083	957 aa		12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	NME9	Q86XW9	330 aa		12.08	□□□□□ -0.48
DDX3X-219	ENST00000630255	USP54	Q70EL1	1684 aa		12.07	□□□□□ -0.48
DDX3X-219	ENST00000630255	SMARCA5	O60264	1052 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	MYCN	P04198	464 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	CASC1	Q6TDU7	716 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	MEIS3	Q99687	375 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	ZRANB1	Q9UGI0	708 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	PXDNL	A1KZ92	1463 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	MBD3	O95983	291 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	DCTN1	Q14203	1278 aa		12.06	□□□□□ -0.48
DDX3X-219	ENST00000630255	INTS4	Q96HW7	963 aa	Known RBP	12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	TMX3	Q96JJ7	454 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	CHAMP1	Q96JM3	812 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	MAP7D2	Q96T17	732 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	SYCE3	A1L190	88 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	PDE1A	P54750	535 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	KRT24	Q2M2I5	525 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	CCDC39	Q9UFE4	941 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	WASL	O00401	505 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	MCM2	P49736	904 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	XPC	Q01831	940 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	CSPP1	Q1MSJ5	1256 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	WAPL	Q7Z5K2	1190 aa		12.05	□□□□□ -0.48
DDX3X-219	ENST00000630255	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.04	□□□□□ -0.48
DDX3X-219	ENST00000630255	ANAPC15	P60006	121 aa		12.04	□□□□□ -0.48
DDX3X-219	ENST00000630255	NCL	P19338	710 aa	Known RBP	12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	UBR1	Q8IWV7	1749 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	DYNC1I1	O14576	645 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	ESYT1	Q9BSJ8	1104 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	UQCRHL	A0A096LP55	91 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	UQCRH	P07919	91 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	TMEM87A	Q8NBN3	555 aa		12.03	□□□□□ -0.48
DDX3X-219	ENST00000630255	RRS1	Q15050	365 aa	Known RBP	12.02	□□□□□ -0.48
DDX3X-219	ENST00000630255	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.02	□□□□□ -0.48
DDX3X-219	ENST00000630255	USP31	Q70CQ4	1352 aa		12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	EPB41L2	O43491	1005 aa	Known RBP	12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	HOXD11	P31277	338 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	EIF4A2	Q14240	407 aa	Known RBP	12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	SASS6	Q6UVJ0	657 aa		12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	PALD1	Q9ULE6	856 aa		12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	MET	P08581	1390 aa		12.02	□□□□□ -0.49
DDX3X-219	ENST00000630255	AEBP1	Q8IUX7	1158 aa		12.01	□□□□□ -0.49
DDX3X-219	ENST00000630255	SIRT1	Q96EB6	747 aa		12.01	□□□□□ -0.49
DDX3X-219	ENST00000630255	COG3	Q96JB2	828 aa		12.01	□□□□□ -0.49
DDX3X-219	ENST00000630255	PRDM4	Q9UKN5	801 aa		12.01	□□□□□ -0.49
DDX3X-219	ENST00000630255	STAP2	Q9UGK3	403 aa		12.01	□□□□□ -0.49
DDX3X-219	ENST00000630255	PIK3C2A	O00443	1686 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	KDM3B	Q7LBC6	1761 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	KDR	P35968	1356 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	AOX1	Q06278	1338 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	NPM1	P06748	294 aa	Known RBP eCLIP	12	□□□□□ -0.49
DDX3X-219	ENST00000630255	ATXN8OS	P0DMR3	200 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	MTERF4	Q7Z6M4	381 aa	Known RBP	12	□□□□□ -0.49
DDX3X-219	ENST00000630255	PRR36	Q9H6K5	1346 aa		12	□□□□□ -0.49
DDX3X-219	ENST00000630255	NWD1	Q149M9	1564 aa		11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	HMMR	O75330	724 aa		11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	NEK4	P51957	841 aa		11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	BBX	Q8WY36	941 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	TSPY26P	Q9H489	355 aa		11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	CHML	P26374	656 aa		11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	CCT4	P50991	539 aa	Known RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	NUDT16	Q96DE0	195 aa	Known RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	CDK11B	P21127	795 aa	Known RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	RGPD8	O14715	1765 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX3X-219	ENST00000630255	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	4e-7	■■■■■ 30.9
DDX3X-219	ENST00000630255	MCM10	Q7L590	875 aa		11.98	□□□□□ -0.49
DDX3X-219	ENST00000630255	MED1	Q15648	1581 aa	Predicted RBP	11.98	□□□□□ -0.49
DDX3X-219	ENST00000630255	UVSSA	Q2YD98	709 aa		11.98	□□□□□ -0.49
DDX3X-219	ENST00000630255	USP6	P35125	1406 aa		11.98	□□□□□ -0.49
DDX3X-219	ENST00000630255	G2E3	Q7L622	706 aa		11.98	□□□□□ -0.49
DDX3X-219	ENST00000630255	NCKAP5L	Q9HCH0	1330 aa		11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	SULT6B1	Q6IMI4	303 aa		11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	CCDC61	Q9Y6R9	512 aa		11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	GADD45B	O75293	160 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	MX1	P20591	662 aa		11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	MYRIP	Q8NFW9	859 aa		11.97	□□□□□ -0.49
DDX3X-219	ENST00000630255	FAM184A	Q8NB25	1140 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	SYAP1	Q96A49	352 aa	Predicted RBP	11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	IL25	Q9H293	177 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	DIP2A	Q14689	1571 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	DIP2B	Q9P265	1576 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	MYH15	Q9Y2K3	1946 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	KIAA2012	Q0VF49	1180 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	PIBF1	Q8WXW3	757 aa		11.96	□□□□□ -0.49
DDX3X-219	ENST00000630255	TTC21B	Q7Z4L5	1316 aa		11.96	□□□□□ -0.5
DDX3X-219	ENST00000630255	HSPA4	P34932	840 aa		11.96	□□□□□ -0.5
DDX3X-219	ENST00000630255	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
DDX3X-219	ENST00000630255	LRRCC1	Q9C099	1032 aa		11.96	□□□□□ -0.5
DDX3X-219	ENST00000630255	FAM13B	Q9NYF5	915 aa		11.96	□□□□□ -0.5
DDX3X-219	ENST00000630255	APBB1	O00213	710 aa		11.95	□□□□□ -0.5

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