RNA–Protein interactions for RNA: ENST00000630255.2

DDX3X-219, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-219ENST00000630255 BRD1O95696 1058 aa12.08□□□□□ -0.48
DDX3X-219ENST00000630255 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
DDX3X-219ENST00000630255 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.48
DDX3X-219ENST00000630255 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
DDX3X-219ENST00000630255 ERC2O15083 957 aa12.08□□□□□ -0.48
DDX3X-219ENST00000630255 NME9Q86XW9 330 aa12.08□□□□□ -0.48
DDX3X-219ENST00000630255 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
DDX3X-219ENST00000630255 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
DDX3X-219ENST00000630255 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
DDX3X-219ENST00000630255 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 MEIS3Q99687 375 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 MBD3O95983 291 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
DDX3X-219ENST00000630255 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
DDX3X-219ENST00000630255 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 SYCE3A1L190 88 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 PDE1AP54750 535 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 WASLO00401 505 aaPredicted RBP12.05□□□□□ -0.48
DDX3X-219ENST00000630255 MCM2P49736 904 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
DDX3X-219ENST00000630255 CSPP1Q1MSJ5 1256 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
DDX3X-219ENST00000630255 R3HCC1Q9Y3T6 440 aaKnown RBP12.04□□□□□ -0.48
DDX3X-219ENST00000630255 ANAPC15P60006 121 aa12.04□□□□□ -0.48
DDX3X-219ENST00000630255 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
DDX3X-219ENST00000630255 RPAP1Q9BWH6 1393 aaPredicted RBP12.03□□□□□ -0.48
DDX3X-219ENST00000630255 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 DYNC1I1O14576 645 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 NAP1L2Q9ULW6 460 aaPredicted RBP12.03□□□□□ -0.48
DDX3X-219ENST00000630255 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 UQCRHP07919 91 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
DDX3X-219ENST00000630255 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.48
DDX3X-219ENST00000630255 FBXO31Q5XUX0 539 aaPredicted RBP12.02□□□□□ -0.48
DDX3X-219ENST00000630255 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
DDX3X-219ENST00000630255 EPB41L2O43491 1005 aaKnown RBP12.02□□□□□ -0.49
DDX3X-219ENST00000630255 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
DDX3X-219ENST00000630255 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
DDX3X-219ENST00000630255 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
DDX3X-219ENST00000630255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX3X-219ENST00000630255 PALD1Q9ULE6 856 aa12.02□□□□□ -0.49
DDX3X-219ENST00000630255 METP08581 1390 aa12.02□□□□□ -0.49
DDX3X-219ENST00000630255 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
DDX3X-219ENST00000630255 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
DDX3X-219ENST00000630255 COG3Q96JB2 828 aa12.01□□□□□ -0.49
DDX3X-219ENST00000630255 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
DDX3X-219ENST00000630255 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
DDX3X-219ENST00000630255 PIK3C2AO00443 1686 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 KDRP35968 1356 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 AOX1Q06278 1338 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
DDX3X-219ENST00000630255 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
DDX3X-219ENST00000630255 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
DDX3X-219ENST00000630255 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
DDX3X-219ENST00000630255 CEP170BQ9Y4F5 1589 aaPredicted RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 HMMRO75330 724 aa11.99□□□□□ -0.49
DDX3X-219ENST00000630255 NEK4P51957 841 aa11.99□□□□□ -0.49
DDX3X-219ENST00000630255 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
DDX3X-219ENST00000630255 CHMLP26374 656 aa11.99□□□□□ -0.49
DDX3X-219ENST00000630255 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
DDX3X-219ENST00000630255 GTF2F1P35269 517 aaKnown RBP eCLIP11.98□□□□□ -0.494e-7■■■■■ 30.9
DDX3X-219ENST00000630255 MCM10Q7L590 875 aa11.98□□□□□ -0.49
DDX3X-219ENST00000630255 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
DDX3X-219ENST00000630255 UVSSAQ2YD98 709 aa11.98□□□□□ -0.49
DDX3X-219ENST00000630255 USP6P35125 1406 aa11.98□□□□□ -0.49
DDX3X-219ENST00000630255 G2E3Q7L622 706 aa11.98□□□□□ -0.49
DDX3X-219ENST00000630255 NCKAP5LQ9HCH0 1330 aa11.97□□□□□ -0.49
DDX3X-219ENST00000630255 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
DDX3X-219ENST00000630255 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
DDX3X-219ENST00000630255 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
DDX3X-219ENST00000630255 MX1P20591 662 aa11.97□□□□□ -0.49
DDX3X-219ENST00000630255 MYRIPQ8NFW9 859 aa11.97□□□□□ -0.49
DDX3X-219ENST00000630255 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
DDX3X-219ENST00000630255 IL25Q9H293 177 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 DIP2AQ14689 1571 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 DIP2BQ9P265 1576 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 MYH15Q9Y2K3 1946 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
DDX3X-219ENST00000630255 TTC21BQ7Z4L5 1316 aa11.96□□□□□ -0.5
DDX3X-219ENST00000630255 HSPA4P34932 840 aa11.96□□□□□ -0.5
DDX3X-219ENST00000630255 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.5
DDX3X-219ENST00000630255 LRRCC1Q9C099 1032 aa11.96□□□□□ -0.5
DDX3X-219ENST00000630255 FAM13BQ9NYF5 915 aa11.96□□□□□ -0.5
DDX3X-219ENST00000630255 APBB1O00213 710 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms