RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 QSER1Q2KHR3 1735 aa18.55■□□□□ 0.56
SNRPA1-216ENST00000626000 C5P01031 1676 aa18.55■□□□□ 0.56
SNRPA1-216ENST00000626000 TEFQ10587 303 aa18.55■□□□□ 0.56
SNRPA1-216ENST00000626000 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
SNRPA1-216ENST00000626000 SIK1P57059 783 aa18.54■□□□□ 0.56
SNRPA1-216ENST00000626000 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
SNRPA1-216ENST00000626000 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
SNRPA1-216ENST00000626000 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-216ENST00000626000 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
SNRPA1-216ENST00000626000 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
SNRPA1-216ENST00000626000 CEMIPQ8WUJ3 1361 aa18.53■□□□□ 0.56
SNRPA1-216ENST00000626000 SRCAPQ6ZRS2 3230 aa18.52■□□□□ 0.56
SNRPA1-216ENST00000626000 TAF1LQ8IZX4 1826 aa18.52■□□□□ 0.56
SNRPA1-216ENST00000626000 FLAD1Q8NFF5 587 aa18.52■□□□□ 0.56
SNRPA1-216ENST00000626000 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-216ENST00000626000 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
SNRPA1-216ENST00000626000 LRP5O75197 1615 aa18.52■□□□□ 0.55
SNRPA1-216ENST00000626000 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
SNRPA1-216ENST00000626000 PLEKHF1Q96S99 279 aa18.51■□□□□ 0.55
SNRPA1-216ENST00000626000 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-216ENST00000626000 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
SNRPA1-216ENST00000626000 AKT1S1Q96B36 256 aa18.5■□□□□ 0.55
SNRPA1-216ENST00000626000 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
SNRPA1-216ENST00000626000 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
SNRPA1-216ENST00000626000 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
SNRPA1-216ENST00000626000 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
SNRPA1-216ENST00000626000 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
SNRPA1-216ENST00000626000 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
SNRPA1-216ENST00000626000 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
SNRPA1-216ENST00000626000 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
SNRPA1-216ENST00000626000 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
SNRPA1-216ENST00000626000 AK7Q96M32 723 aa18.48■□□□□ 0.55
SNRPA1-216ENST00000626000 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
SNRPA1-216ENST00000626000 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
SNRPA1-216ENST00000626000 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-216ENST00000626000 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
SNRPA1-216ENST00000626000 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-216ENST00000626000 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
SNRPA1-216ENST00000626000 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
SNRPA1-216ENST00000626000 DLG5Q8TDM6 1919 aa18.45■□□□□ 0.54
SNRPA1-216ENST00000626000 RC3H1Q5TC82 1133 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-216ENST00000626000 MTFR1LQ9H019 292 aa18.45■□□□□ 0.54
SNRPA1-216ENST00000626000 CNTNAP4Q9C0A0 1308 aa18.45■□□□□ 0.54
SNRPA1-216ENST00000626000 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-216ENST00000626000 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-216ENST00000626000 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-216ENST00000626000 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 SSFA2P28290 1259 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 KCNQ4P56696 695 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 ZNF790Q6PG37 636 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 ADAMTS8Q9UP79 889 aa18.43■□□□□ 0.54
SNRPA1-216ENST00000626000 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
SNRPA1-216ENST00000626000 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
SNRPA1-216ENST00000626000 PNPLA7Q6ZV29 1317 aa18.42■□□□□ 0.54
SNRPA1-216ENST00000626000 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
SNRPA1-216ENST00000626000 UBR3Q6ZT12 1888 aa18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 ITPK1Q13572 414 aa18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
SNRPA1-216ENST00000626000 RIPK4P57078 832 aa18.4■□□□□ 0.54
SNRPA1-216ENST00000626000 MCM10Q7L590 875 aa18.4■□□□□ 0.54
SNRPA1-216ENST00000626000 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-216ENST00000626000 TJP1Q07157 1748 aa18.4■□□□□ 0.54
SNRPA1-216ENST00000626000 GNPATO15228 680 aa18.39■□□□□ 0.53
SNRPA1-216ENST00000626000 STARD3NLO95772 234 aa18.39■□□□□ 0.53
SNRPA1-216ENST00000626000 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
SNRPA1-216ENST00000626000 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
SNRPA1-216ENST00000626000 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-216ENST00000626000 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
SNRPA1-216ENST00000626000 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
SNRPA1-216ENST00000626000 RPS6KA4O75676 772 aa18.37■□□□□ 0.53
SNRPA1-216ENST00000626000 POLD1P28340 1107 aa18.37■□□□□ 0.53
SNRPA1-216ENST00000626000 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
SNRPA1-216ENST00000626000 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-216ENST00000626000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-216ENST00000626000 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
SNRPA1-216ENST00000626000 CRKLP46109 303 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-216ENST00000626000 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 TRAPPC3LQ5T215 181 aa18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 CCDC87Q9NVE4 849 aa18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
SNRPA1-216ENST00000626000 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-216ENST00000626000 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-216ENST00000626000 DNAJC10Q8IXB1 793 aa18.34■□□□□ 0.53
SNRPA1-216ENST00000626000 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-216ENST00000626000 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
SNRPA1-216ENST00000626000 PHF14O94880 888 aa18.32■□□□□ 0.52
SNRPA1-216ENST00000626000 RFC4P35249 363 aa18.32■□□□□ 0.52
SNRPA1-216ENST00000626000 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-216ENST00000626000 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-216ENST00000626000 APAF1O14727 1248 aa18.31■□□□□ 0.52
SNRPA1-216ENST00000626000 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
SNRPA1-216ENST00000626000 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms