RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CAPN2P17655 700 aa15.17■□□□□ 0.02
LITAF-221ENST00000622633 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
LITAF-221ENST00000622633 MYRIPQ8NFW9 859 aa15.17■□□□□ 0.02
LITAF-221ENST00000622633 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 DLG5Q8TDM6 1919 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 CHL1O00533 1208 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 HSP90B1P14625 803 aaKnown RBP15.16■□□□□ 0.02
LITAF-221ENST00000622633 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 TSC1Q92574 1164 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 APPP05067 770 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 YY1AP1Q9H869 796 aa15.16■□□□□ 0.02
LITAF-221ENST00000622633 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
LITAF-221ENST00000622633 ROBO2Q9HCK4 1378 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 K7ELQ4 463 aaPredicted RBP15.15■□□□□ 0.02
LITAF-221ENST00000622633 FAM193AP78312 1265 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
LITAF-221ENST00000622633 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 ACEP12821 1306 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 KIF24Q5T7B8 1368 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 APBB1O00213 710 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 TULP2O00295 520 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
LITAF-221ENST00000622633 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
LITAF-221ENST00000622633 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
LITAF-221ENST00000622633 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
LITAF-221ENST00000622633 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
LITAF-221ENST00000622633 TECPR2O15040 1411 aa15.13■□□□□ 0.01
LITAF-221ENST00000622633 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
LITAF-221ENST00000622633 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
LITAF-221ENST00000622633 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
LITAF-221ENST00000622633 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
LITAF-221ENST00000622633 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.01
LITAF-221ENST00000622633 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
LITAF-221ENST00000622633 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
LITAF-221ENST00000622633 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
LITAF-221ENST00000622633 MEIS3Q99687 375 aa15.12■□□□□ 0.01
LITAF-221ENST00000622633 RGS12O14924 1447 aa15.12■□□□□ 0.01
LITAF-221ENST00000622633 C3P01024 1663 aa15.12■□□□□ 0.01
LITAF-221ENST00000622633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
LITAF-221ENST00000622633 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
LITAF-221ENST00000622633 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
LITAF-221ENST00000622633 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
LITAF-221ENST00000622633 FOXO3O43524 673 aa15.11■□□□□ 0.01
LITAF-221ENST00000622633 AXDND1Q5T1B0 1012 aaPredicted RBP15.11■□□□□ 0.01
LITAF-221ENST00000622633 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
LITAF-221ENST00000622633 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 TNRQ92752 1358 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 TIGD1Q96MW7 591 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 MSH6P52701 1360 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 SSFA2P28290 1259 aa15.1■□□□□ 0.01
LITAF-221ENST00000622633 GTF2F1P35269 517 aaKnown RBP eCLIP15.1■□□□□ 0.01
LITAF-221ENST00000622633 RTL1A6NKG5 1358 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 KIAA0232Q92628 1395 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 SDSP20132 328 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 PDLIM2Q96JY6 352 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 USP26Q9BXU7 913 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 AKAP12Q02952 1782 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 PTPRCP08575 1304 aa15.09■□□□□ 0.01
LITAF-221ENST00000622633 LTKP29376 864 aa15.08■□□□□ 0.01
LITAF-221ENST00000622633 MCM5P33992 734 aa15.08■□□□□ 0.01
LITAF-221ENST00000622633 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0.01
LITAF-221ENST00000622633 G2E3Q7L622 706 aa15.08■□□□□ 0.01
LITAF-221ENST00000622633 OVOS2A0A0J9YW53 1432 aa15.08■□□□□ 0
LITAF-221ENST00000622633 OVOS2Q6IE36 1432 aa15.08■□□□□ 0
LITAF-221ENST00000622633 PATL2C9JE40 543 aaKnown RBP15.08■□□□□ 0
LITAF-221ENST00000622633 F6X3S4 739 aa15.08■□□□□ 0
LITAF-221ENST00000622633 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
LITAF-221ENST00000622633 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
LITAF-221ENST00000622633 ITSN1Q15811 1721 aa15.08■□□□□ 0
LITAF-221ENST00000622633 CRB1P82279 1406 aa15.08■□□□□ 0
LITAF-221ENST00000622633 RABEP1Q15276 862 aa15.07■□□□□ 0
LITAF-221ENST00000622633 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
LITAF-221ENST00000622633 ADAMTS13Q76LX8 1427 aa15.07■□□□□ 0
LITAF-221ENST00000622633 MAP3K19Q56UN5 1328 aa15.07■□□□□ 0
LITAF-221ENST00000622633 CCDC66A2RUB6 948 aa15.07■□□□□ 0
LITAF-221ENST00000622633 C14orf37Q86TY3 774 aa15.07■□□□□ 0
LITAF-221ENST00000622633 TSPYL4Q9UJ04 414 aa15.07■□□□□ 0
LITAF-221ENST00000622633 NRKQ7Z2Y5 1582 aa15.07■□□□□ 0
LITAF-221ENST00000622633 SLFN14P0C7P3 912 aa15.06■□□□□ 0
LITAF-221ENST00000622633 USP6P35125 1406 aa15.06■□□□□ 0
LITAF-221ENST00000622633 U2AF2P26368 475 aaKnown RBP eCLIP15.06■□□□□ 0
LITAF-221ENST00000622633 SKOR2Q2VWA4 1001 aaPredicted RBP15.06■□□□□ 0
LITAF-221ENST00000622633 RTF1Q92541 710 aaKnown RBP15.06■□□□□ 0
LITAF-221ENST00000622633 LOC102724159A0A0B4J2E5 919 aa15.05■□□□□ 0
LITAF-221ENST00000622633 PWP2Q15269 919 aaKnown RBP15.05■□□□□ 0
LITAF-221ENST00000622633 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
LITAF-221ENST00000622633 GABPB1Q06547 395 aaPredicted RBP15.05■□□□□ -0
LITAF-221ENST00000622633 GRIPAP1Q4V328 841 aa15.05■□□□□ -0
LITAF-221ENST00000622633 PDCL2Q8N4E4 241 aa15.05■□□□□ -0
LITAF-221ENST00000622633 KIF3AQ9Y496 699 aa15.05■□□□□ -0
LITAF-221ENST00000622633 USP31Q70CQ4 1352 aa15.05■□□□□ -0
LITAF-221ENST00000622633 FAM177BA6PVY3 158 aa15.04■□□□□ -0
LITAF-221ENST00000622633 PEAK1Q9H792 1746 aa15.04■□□□□ -0
LITAF-221ENST00000622633 CASC1Q6TDU7 716 aa15.04■□□□□ -0
LITAF-221ENST00000622633 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
LITAF-221ENST00000622633 BAG4O95429 457 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms