RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 MYT1Q01538 1121 aa18.82■□□□□ 0.6
GTF3C2-214ENST00000622534 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
GTF3C2-214ENST00000622534 TOGARAM1Q9Y4F4 1720 aa18.82■□□□□ 0.6
GTF3C2-214ENST00000622534 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
GTF3C2-214ENST00000622534 CABP4P57796 275 aa18.81■□□□□ 0.6
GTF3C2-214ENST00000622534 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
GTF3C2-214ENST00000622534 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
GTF3C2-214ENST00000622534 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
GTF3C2-214ENST00000622534 TSR2Q969E8 191 aaKnown RBP18.8■□□□□ 0.6
GTF3C2-214ENST00000622534 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
GTF3C2-214ENST00000622534 BTBD11A6QL63 1104 aa18.79■□□□□ 0.6
GTF3C2-214ENST00000622534 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
GTF3C2-214ENST00000622534 KRT27Q7Z3Y8 459 aa18.77■□□□□ 0.6
GTF3C2-214ENST00000622534 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
GTF3C2-214ENST00000622534 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
GTF3C2-214ENST00000622534 RGS12O14924 1447 aa18.76■□□□□ 0.59
GTF3C2-214ENST00000622534 MIS18AQ9NYP9 233 aa18.76■□□□□ 0.59
GTF3C2-214ENST00000622534 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
GTF3C2-214ENST00000622534 EXOSC9Q06265 439 aaKnown RBP18.75■□□□□ 0.59
GTF3C2-214ENST00000622534 PAPPAQ13219 1627 aa18.75■□□□□ 0.59
GTF3C2-214ENST00000622534 BRWD3Q6RI45 1802 aa18.75■□□□□ 0.59
GTF3C2-214ENST00000622534 ITGB4P16144 1822 aa18.74■□□□□ 0.59
GTF3C2-214ENST00000622534 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
GTF3C2-214ENST00000622534 PIGBQ92521 554 aa18.74■□□□□ 0.59
GTF3C2-214ENST00000622534 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
GTF3C2-214ENST00000622534 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
GTF3C2-214ENST00000622534 HEG1Q9ULI3 1381 aa18.73■□□□□ 0.59
GTF3C2-214ENST00000622534 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
GTF3C2-214ENST00000622534 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
GTF3C2-214ENST00000622534 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
GTF3C2-214ENST00000622534 KCNQ3O43525 872 aa18.71■□□□□ 0.59
GTF3C2-214ENST00000622534 HOXB7P09629 217 aa18.71■□□□□ 0.59
GTF3C2-214ENST00000622534 C8orf58Q8NAV2 365 aa18.71■□□□□ 0.59
GTF3C2-214ENST00000622534 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
GTF3C2-214ENST00000622534 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
GTF3C2-214ENST00000622534 VAMP4O75379 141 aa18.7■□□□□ 0.58
GTF3C2-214ENST00000622534 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
GTF3C2-214ENST00000622534 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
GTF3C2-214ENST00000622534 ACSBG1Q96GR2 724 aa18.7■□□□□ 0.58
GTF3C2-214ENST00000622534 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
GTF3C2-214ENST00000622534 CHMP4AQ9BY43 222 aa18.68■□□□□ 0.58
GTF3C2-214ENST00000622534 SBF2Q86WG5 1849 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 KCNQ2O43526 872 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 FAM182BQ5T319 152 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 KRT24Q2M2I5 525 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 SMARCC1Q92922 1105 aaPredicted RBP18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 ZNF496Q96IT1 587 aaPredicted RBP18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 BCL11BQ9C0K0 894 aaPredicted RBP18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
GTF3C2-214ENST00000622534 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
GTF3C2-214ENST00000622534 RARSP54136 660 aaKnown RBP18.65■□□□□ 0.58
GTF3C2-214ENST00000622534 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
GTF3C2-214ENST00000622534 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
GTF3C2-214ENST00000622534 BRPF1P55201 1214 aaPredicted RBP18.63■□□□□ 0.57
GTF3C2-214ENST00000622534 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
GTF3C2-214ENST00000622534 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
GTF3C2-214ENST00000622534 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
GTF3C2-214ENST00000622534 TEX13AQ9BXU3 409 aaPredicted RBP18.62■□□□□ 0.57
GTF3C2-214ENST00000622534 BTAF1O14981 1849 aa18.62■□□□□ 0.57
GTF3C2-214ENST00000622534 RNF123Q5XPI4 1314 aa18.62■□□□□ 0.57
GTF3C2-214ENST00000622534 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
GTF3C2-214ENST00000622534 PTF1AQ7RTS3 328 aa18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 C5P01031 1676 aa18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
GTF3C2-214ENST00000622534 MRPL50Q8N5N7 158 aaKnown RBP18.58■□□□□ 0.57
GTF3C2-214ENST00000622534 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.57
GTF3C2-214ENST00000622534 ERBB4Q15303 1308 aa18.58■□□□□ 0.57
GTF3C2-214ENST00000622534 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 PRAMEF22A3QJZ6 481 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 BCAR3O75815 825 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 TRIM37O94972 964 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 SIK1P57059 783 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 SLC4A9Q96Q91 983 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
GTF3C2-214ENST00000622534 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
GTF3C2-214ENST00000622534 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
GTF3C2-214ENST00000622534 TJP1Q07157 1748 aa18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 EIF2S2P20042 333 aaKnown RBP18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 SUPT16HQ9Y5B9 1047 aaKnown RBP18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 LY75O60449 1722 aa18.56■□□□□ 0.56
GTF3C2-214ENST00000622534 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
GTF3C2-214ENST00000622534 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
GTF3C2-214ENST00000622534 STARD3NLO95772 234 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 DDX21Q9NR30 783 aaKnown RBP eCLIP18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 PLSCR1O15162 318 aa18.54■□□□□ 0.56
GTF3C2-214ENST00000622534 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms