RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 ITGB4P16144 1822 aa22.98■■□□□ 1.27
SLC6A6-209ENST00000622176 BAG6P46379 1132 aa22.96■■□□□ 1.27
SLC6A6-209ENST00000622176 TEFQ10587 303 aa22.96■■□□□ 1.27
SLC6A6-209ENST00000622176 BTAF1O14981 1849 aa22.96■■□□□ 1.27
SLC6A6-209ENST00000622176 PLSCR1O15162 318 aa22.95■■□□□ 1.26
SLC6A6-209ENST00000622176 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
SLC6A6-209ENST00000622176 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
SLC6A6-209ENST00000622176 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
SLC6A6-209ENST00000622176 NGEFQ8N5V2 710 aa22.93■■□□□ 1.26
SLC6A6-209ENST00000622176 ATG3Q9NT62 314 aa22.93■■□□□ 1.26
SLC6A6-209ENST00000622176 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
SLC6A6-209ENST00000622176 ASAP1Q9ULH1 1129 aa22.92■■□□□ 1.26
SLC6A6-209ENST00000622176 TAF7Q15545 349 aaPredicted RBP22.91■■□□□ 1.26
SLC6A6-209ENST00000622176 CAMKK2Q96RR4 588 aa22.91■■□□□ 1.26
SLC6A6-209ENST00000622176 SENP3-EIF4A1A0A087X0R7 540 aa22.9■■□□□ 1.26
SLC6A6-209ENST00000622176 EN1Q05925 392 aaPredicted RBP22.9■■□□□ 1.26
SLC6A6-209ENST00000622176 SIPA1L3O60292 1781 aaPredicted RBP22.9■■□□□ 1.26
SLC6A6-209ENST00000622176 PALLDQ8WX93 1383 aa22.89■■□□□ 1.26
SLC6A6-209ENST00000622176 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
SLC6A6-209ENST00000622176 RREB1Q92766 1687 aa22.88■■□□□ 1.25
SLC6A6-209ENST00000622176 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
SLC6A6-209ENST00000622176 RGPD3A6NKT7 1758 aaPredicted RBP22.87■■□□□ 1.25
SLC6A6-209ENST00000622176 RGPD4Q7Z3J3 1758 aa22.87■■□□□ 1.25
SLC6A6-209ENST00000622176 SLC39A6Q13433 755 aa22.87■■□□□ 1.25
SLC6A6-209ENST00000622176 PROM2Q8N271 834 aa22.87■■□□□ 1.25
SLC6A6-209ENST00000622176 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
SLC6A6-209ENST00000622176 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
SLC6A6-209ENST00000622176 TXNRD1Q16881 649 aa22.86■■□□□ 1.25
SLC6A6-209ENST00000622176 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
SLC6A6-209ENST00000622176 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
SLC6A6-209ENST00000622176 SALL2Q9Y467 1007 aaPredicted RBP22.85■■□□□ 1.25
SLC6A6-209ENST00000622176 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
SLC6A6-209ENST00000622176 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
SLC6A6-209ENST00000622176 SIK1P57059 783 aa22.84■■□□□ 1.25
SLC6A6-209ENST00000622176 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
SLC6A6-209ENST00000622176 NUP188Q5SRE5 1749 aa22.84■■□□□ 1.25
SLC6A6-209ENST00000622176 LY75O60449 1722 aa22.83■■□□□ 1.25
SLC6A6-209ENST00000622176 CHL1O00533 1208 aa22.83■■□□□ 1.25
SLC6A6-209ENST00000622176 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
SLC6A6-209ENST00000622176 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.25
SLC6A6-209ENST00000622176 LRP5O75197 1615 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 KCNQ3O43525 872 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 CCNL1Q9UK58 526 aaPredicted RBP22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 IL16Q14005 1332 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 ZNF521Q96K83 1311 aa22.82■■□□□ 1.24
SLC6A6-209ENST00000622176 PTCD1O75127 700 aaKnown RBP22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 LRRC4BQ9NT99 713 aa22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 TSPYL4Q9UJ04 414 aa22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 KCPQ6ZWJ8 1503 aa22.81■■□□□ 1.24
SLC6A6-209ENST00000622176 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
SLC6A6-209ENST00000622176 GNAI1P63096 354 aa22.79■■□□□ 1.24
SLC6A6-209ENST00000622176 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
SLC6A6-209ENST00000622176 UBR2Q8IWV8 1755 aa22.78■■□□□ 1.24
SLC6A6-209ENST00000622176 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
SLC6A6-209ENST00000622176 KCNQ4P56696 695 aa22.78■■□□□ 1.24
SLC6A6-209ENST00000622176 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
SLC6A6-209ENST00000622176 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
SLC6A6-209ENST00000622176 KDM3BQ7LBC6 1761 aa22.77■■□□□ 1.24
SLC6A6-209ENST00000622176 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.24
SLC6A6-209ENST00000622176 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
SLC6A6-209ENST00000622176 ZNF831Q5JPB2 1677 aa22.77■■□□□ 1.24
SLC6A6-209ENST00000622176 EIF4A1P60842 406 aaKnown RBP22.76■■□□□ 1.23
SLC6A6-209ENST00000622176 HNRNPUQ00839 825 aaKnown RBP eCLIP22.76■■□□□ 1.23
SLC6A6-209ENST00000622176 ITPK1Q13572 414 aa22.76■■□□□ 1.23
SLC6A6-209ENST00000622176 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
SLC6A6-209ENST00000622176 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
SLC6A6-209ENST00000622176 CICQ96RK0 1608 aaPredicted RBP22.72■■□□□ 1.23
SLC6A6-209ENST00000622176 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
SLC6A6-209ENST00000622176 DNAJC10Q8IXB1 793 aa22.72■■□□□ 1.23
SLC6A6-209ENST00000622176 LINC00116Q8NCU8 138 aa22.72■■□□□ 1.23
SLC6A6-209ENST00000622176 TEX13AQ9BXU3 409 aaPredicted RBP22.72■■□□□ 1.23
SLC6A6-209ENST00000622176 GIGYF1O75420 1035 aaPredicted RBP22.71■■□□□ 1.23
SLC6A6-209ENST00000622176 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
SLC6A6-209ENST00000622176 R3HDM1Q15032 1099 aaKnown RBP22.71■■□□□ 1.23
SLC6A6-209ENST00000622176 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
SLC6A6-209ENST00000622176 TJP1Q07157 1748 aa22.7■■□□□ 1.22
SLC6A6-209ENST00000622176 CYP19A1P11511 503 aaPredicted RBP22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 NBPF14Q5TI25 921 aa22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 TSR2Q969E8 191 aaKnown RBP22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 AKT1S1Q96B36 256 aa22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 MYH16Q9H6N6 1097 aa22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
SLC6A6-209ENST00000622176 TAF1LQ8IZX4 1826 aa22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 C5P01031 1676 aa22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 CNTNAP4Q9C0A0 1308 aa22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 FANCIQ9NVI1 1328 aa22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 STARD3NLO95772 234 aa22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 RC3H1Q5TC82 1133 aaKnown RBP22.68■■□□□ 1.22
SLC6A6-209ENST00000622176 ZBED9Q6R2W3 1325 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 PRAMEF22A3QJZ6 481 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 E9PSI1 815 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 SLFN5Q08AF3 891 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 ZNF827Q17R98 1081 aa22.67■■□□□ 1.22
SLC6A6-209ENST00000622176 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms