RNA–Protein interactions for RNA: ENST00000619917.4

POLR2E-214, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5 BASIC

Gene POLR2E, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-214ENST00000619917 ITPK1Q13572 414 aa28.99■■■□□ 2.23
POLR2E-214ENST00000619917 RALBP1Q15311 655 aa28.99■■■□□ 2.23
POLR2E-214ENST00000619917 TAF1LQ8IZX4 1826 aa28.99■■■□□ 2.23
POLR2E-214ENST00000619917 SLC4A9Q96Q91 983 aa28.98■■■□□ 2.23
POLR2E-214ENST00000619917 PTGER2P43116 358 aa28.97■■■□□ 2.23
POLR2E-214ENST00000619917 LINC00116Q8NCU8 138 aa28.97■■■□□ 2.23
POLR2E-214ENST00000619917 MTFR1LQ9H019 292 aa28.97■■■□□ 2.23
POLR2E-214ENST00000619917 QSER1Q2KHR3 1735 aa28.97■■■□□ 2.23
POLR2E-214ENST00000619917 ATP6V1AP38606 617 aa28.96■■■□□ 2.23
POLR2E-214ENST00000619917 GAS2L2Q8NHY3 880 aa28.95■■■□□ 2.22
POLR2E-214ENST00000619917 RBM42Q9BTD8 480 aaKnown RBP28.95■■■□□ 2.22
POLR2E-214ENST00000619917 SLC52A2Q9HAB3 445 aa28.95■■■□□ 2.22
POLR2E-214ENST00000619917 FCHSD2O94868 740 aa28.94■■■□□ 2.22
POLR2E-214ENST00000619917 AMIGO3Q86WK7 504 aa28.94■■■□□ 2.22
POLR2E-214ENST00000619917 COL23A1Q86Y22 540 aaPredicted RBP28.94■■■□□ 2.22
POLR2E-214ENST00000619917 C4BP0C0L5 1744 aa28.94■■■□□ 2.22
POLR2E-214ENST00000619917 ADAMTS7Q9UKP4 1686 aa28.93■■■□□ 2.22
POLR2E-214ENST00000619917 SGIP1Q9BQI5 828 aa28.93■■■□□ 2.22
POLR2E-214ENST00000619917 MRC1P22897 1456 aa28.92■■■□□ 2.22
POLR2E-214ENST00000619917 MAP3K5Q99683 1374 aa28.92■■■□□ 2.22
POLR2E-214ENST00000619917 SMIM5Q71RC9 77 aa28.92■■■□□ 2.22
POLR2E-214ENST00000619917 IL17REQ8NFR9 667 aa28.92■■■□□ 2.22
POLR2E-214ENST00000619917 GNAT3A8MTJ3 354 aa28.91■■■□□ 2.22
POLR2E-214ENST00000619917 PPP1R1BQ9UD71 204 aaPredicted RBP28.91■■■□□ 2.22
POLR2E-214ENST00000619917 PTCD1O75127 700 aaKnown RBP28.9■■■□□ 2.22
POLR2E-214ENST00000619917 HMGB2P26583 209 aaKnown RBP28.9■■■□□ 2.22
POLR2E-214ENST00000619917 SLC16A10Q8TF71 515 aa28.9■■■□□ 2.22
POLR2E-214ENST00000619917 AK7Q96M32 723 aa28.9■■■□□ 2.22
POLR2E-214ENST00000619917 VIRMAQ69YN4 1812 aaKnown RBP28.9■■■□□ 2.22
POLR2E-214ENST00000619917 SLC39A6Q13433 755 aa28.88■■■□□ 2.21
POLR2E-214ENST00000619917 MYBBP1AQ9BQG0 1328 aaKnown RBP28.88■■■□□ 2.21
POLR2E-214ENST00000619917 MSH5O43196 834 aa28.87■■■□□ 2.21
POLR2E-214ENST00000619917 ZNF831Q5JPB2 1677 aa28.85■■■□□ 2.21
POLR2E-214ENST00000619917 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
POLR2E-214ENST00000619917 PHF14O94880 888 aa28.84■■■□□ 2.21
POLR2E-214ENST00000619917 PRKRIP1Q9H875 184 aaPredicted RBP28.84■■■□□ 2.21
POLR2E-214ENST00000619917 UBR3Q6ZT12 1888 aa28.84■■■□□ 2.21
POLR2E-214ENST00000619917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.83■■■□□ 2.21
POLR2E-214ENST00000619917 GNPATO15228 680 aa28.83■■■□□ 2.21
POLR2E-214ENST00000619917 FLAD1Q8NFF5 587 aa28.83■■■□□ 2.21
POLR2E-214ENST00000619917 PLEKHF1Q96S99 279 aa28.83■■■□□ 2.21
POLR2E-214ENST00000619917 CEMIPQ8WUJ3 1361 aa28.82■■■□□ 2.2
POLR2E-214ENST00000619917 SSFA2P28290 1259 aa28.8■■■□□ 2.2
POLR2E-214ENST00000619917 TEFQ10587 303 aa28.8■■■□□ 2.2
POLR2E-214ENST00000619917 MSL1Q68DK7 614 aa28.8■■■□□ 2.2
POLR2E-214ENST00000619917 ARXQ96QS3 562 aa28.8■■■□□ 2.2
POLR2E-214ENST00000619917 COL5A3P25940 1745 aaPredicted RBP28.8■■■□□ 2.2
POLR2E-214ENST00000619917 COL24A1Q17RW2 1714 aa28.8■■■□□ 2.2
POLR2E-214ENST00000619917 KCPQ6ZWJ8 1503 aa28.79■■■□□ 2.2
POLR2E-214ENST00000619917 CNTNAP4Q9C0A0 1308 aa28.79■■■□□ 2.2
POLR2E-214ENST00000619917 RC3H1Q5TC82 1133 aaKnown RBP28.79■■■□□ 2.2
POLR2E-214ENST00000619917 TJP1Q07157 1748 aa28.78■■■□□ 2.2
POLR2E-214ENST00000619917 MCM10Q7L590 875 aa28.78■■■□□ 2.2
POLR2E-214ENST00000619917 DCTN1Q14203 1278 aa28.77■■■□□ 2.2
POLR2E-214ENST00000619917 DNAJC10Q8IXB1 793 aa28.77■■■□□ 2.2
POLR2E-214ENST00000619917 FHDC1Q9C0D6 1143 aaPredicted RBP28.77■■■□□ 2.2
POLR2E-214ENST00000619917 SIPA1L3O60292 1781 aaPredicted RBP28.76■■■□□ 2.19
POLR2E-214ENST00000619917 POLD1P28340 1107 aa28.75■■■□□ 2.19
POLR2E-214ENST00000619917 CRKLP46109 303 aaKnown RBP28.75■■■□□ 2.19
POLR2E-214ENST00000619917 RTF1Q92541 710 aaKnown RBP28.75■■■□□ 2.19
POLR2E-214ENST00000619917 RTCBQ9Y3I0 505 aaKnown RBP28.75■■■□□ 2.19
POLR2E-214ENST00000619917 MYH14Q7Z406 1995 aaKnown RBP28.75■■■□□ 2.19
POLR2E-214ENST00000619917 CICQ96RK0 1608 aaPredicted RBP28.74■■■□□ 2.19
POLR2E-214ENST00000619917 RPS6KA4O75676 772 aa28.74■■■□□ 2.19
POLR2E-214ENST00000619917 HTATSF1O43719 755 aaKnown RBP28.73■■■□□ 2.19
POLR2E-214ENST00000619917 ZNF790Q6PG37 636 aa28.73■■■□□ 2.19
POLR2E-214ENST00000619917 KCNQ3O43525 872 aa28.72■■■□□ 2.19
POLR2E-214ENST00000619917 NEFMP07197 916 aa28.72■■■□□ 2.19
POLR2E-214ENST00000619917 INTS5Q6P9B9 1019 aaKnown RBP28.72■■■□□ 2.19
POLR2E-214ENST00000619917 TTC5Q8N0Z6 440 aa28.72■■■□□ 2.19
POLR2E-214ENST00000619917 SYT17Q9BSW7 474 aa28.72■■■□□ 2.19
POLR2E-214ENST00000619917 UBR2Q8IWV8 1755 aa28.72■■■□□ 2.19
POLR2E-214ENST00000619917 NFE2L2Q16236 605 aa28.71■■■□□ 2.19
POLR2E-214ENST00000619917 TRAPPC3LQ5T215 181 aa28.71■■■□□ 2.19
POLR2E-214ENST00000619917 ARHGEF1Q92888 912 aaKnown RBP28.71■■■□□ 2.19
POLR2E-214ENST00000619917 ZNF496Q96IT1 587 aaPredicted RBP28.71■■■□□ 2.19
POLR2E-214ENST00000619917 PNNQ9H307 717 aaKnown RBP28.71■■■□□ 2.19
POLR2E-214ENST00000619917 BTBD11A6QL63 1104 aa28.7■■■□□ 2.18
POLR2E-214ENST00000619917 CYP19A1P11511 503 aaPredicted RBP28.7■■■□□ 2.18
POLR2E-214ENST00000619917 VSIG10Q8N0Z9 540 aa28.7■■■□□ 2.18
POLR2E-214ENST00000619917 MAPK8IP3Q9UPT6 1336 aa28.69■■■□□ 2.18
POLR2E-214ENST00000619917 DLG5Q8TDM6 1919 aa28.67■■■□□ 2.18
POLR2E-214ENST00000619917 ADRA2BP18089 450 aa28.67■■■□□ 2.18
POLR2E-214ENST00000619917 CCDC87Q9NVE4 849 aa28.67■■■□□ 2.18
POLR2E-214ENST00000619917 HEG1Q9ULI3 1381 aa28.66■■■□□ 2.18
POLR2E-214ENST00000619917 CCDC146Q8IYE0 955 aa28.65■■■□□ 2.18
POLR2E-214ENST00000619917 KLHL34Q8N239 644 aa28.65■■■□□ 2.18
POLR2E-214ENST00000619917 THUMPD2Q9BTF0 503 aaKnown RBP28.65■■■□□ 2.18
POLR2E-214ENST00000619917 ADAMTS8Q9UP79 889 aa28.65■■■□□ 2.18
POLR2E-214ENST00000619917 WDR43Q15061 677 aaKnown RBP eCLIP28.64■■■□□ 2.18
POLR2E-214ENST00000619917 RFC4P35249 363 aa28.63■■■□□ 2.17
POLR2E-214ENST00000619917 FMNL2Q96PY5 1086 aa28.63■■■□□ 2.17
POLR2E-214ENST00000619917 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
POLR2E-214ENST00000619917 TAF7Q15545 349 aaPredicted RBP28.62■■■□□ 2.17
POLR2E-214ENST00000619917 MIS18AQ9NYP9 233 aa28.62■■■□□ 2.17
POLR2E-214ENST00000619917 SOS1Q07889 1333 aaPredicted RBP28.62■■■□□ 2.17
POLR2E-214ENST00000619917 GYS1P13807 737 aa28.61■■■□□ 2.17
POLR2E-214ENST00000619917 CCDC184Q52MB2 194 aa28.61■■■□□ 2.17
POLR2E-214ENST00000619917 SRP68Q9UHB9 627 aaKnown RBP28.61■■■□□ 2.17
POLR2E-214ENST00000619917 C4AP0C0L4 1744 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms