RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 NMRK2Q9NPI5 230 aa8.43□□□□□ -1.06
SSX4B-202ENST00000619890 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
SSX4B-202ENST00000619890 LRRC37A3O60309 1634 aa8.43□□□□□ -1.06
SSX4B-202ENST00000619890 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
SSX4B-202ENST00000619890 NUBP1P53384 320 aa8.42□□□□□ -1.06
SSX4B-202ENST00000619890 FSTL1Q12841 308 aa8.42□□□□□ -1.06
SSX4B-202ENST00000619890 WDR90Q96KV7 1748 aa8.42□□□□□ -1.06
SSX4B-202ENST00000619890 ANKRD26Q9UPS8 1709 aa8.42□□□□□ -1.06
SSX4B-202ENST00000619890 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
SSX4B-202ENST00000619890 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
SSX4B-202ENST00000619890 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
SSX4B-202ENST00000619890 WDR17Q8IZU2 1322 aa8.4□□□□□ -1.06
SSX4B-202ENST00000619890 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
SSX4B-202ENST00000619890 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.06
SSX4B-202ENST00000619890 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.06
SSX4B-202ENST00000619890 RGPD5Q99666 1765 aa8.4□□□□□ -1.07
SSX4B-202ENST00000619890 KCNQ4P56696 695 aa8.39□□□□□ -1.07
SSX4B-202ENST00000619890 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
SSX4B-202ENST00000619890 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
SSX4B-202ENST00000619890 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
SSX4B-202ENST00000619890 TRPC6Q9Y210 931 aa8.39□□□□□ -1.07
SSX4B-202ENST00000619890 RTL1A6NKG5 1358 aa8.38□□□□□ -1.07
SSX4B-202ENST00000619890 POTEJP0CG39 1038 aa8.38□□□□□ -1.07
SSX4B-202ENST00000619890 VASPP50552 380 aaPredicted RBP8.38□□□□□ -1.07
SSX4B-202ENST00000619890 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
SSX4B-202ENST00000619890 ARHGEF25Q86VW2 580 aa8.38□□□□□ -1.07
SSX4B-202ENST00000619890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSX4B-202ENST00000619890 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
SSX4B-202ENST00000619890 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
SSX4B-202ENST00000619890 IGSF1Q8N6C5 1336 aa8.37□□□□□ -1.07
SSX4B-202ENST00000619890 TTLL13PA6NNM8 815 aa8.37□□□□□ -1.07
SSX4B-202ENST00000619890 NME9Q86XW9 330 aa8.37□□□□□ -1.07
SSX4B-202ENST00000619890 C16orf71Q8IYS4 520 aaPredicted RBP8.37□□□□□ -1.07
SSX4B-202ENST00000619890 KIF24Q5T7B8 1368 aa8.36□□□□□ -1.07
SSX4B-202ENST00000619890 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
SSX4B-202ENST00000619890 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
SSX4B-202ENST00000619890 COG3Q96JB2 828 aa8.36□□□□□ -1.07
SSX4B-202ENST00000619890 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
SSX4B-202ENST00000619890 PCDHB13Q9Y5F0 798 aa8.36□□□□□ -1.07
SSX4B-202ENST00000619890 NSD2O96028 1365 aa8.35□□□□□ -1.07
SSX4B-202ENST00000619890 ERBB3P21860 1342 aa8.35□□□□□ -1.07
SSX4B-202ENST00000619890 IER5LQ5T953 404 aa8.35□□□□□ -1.07
SSX4B-202ENST00000619890 SMG6Q86US8 1419 aaKnown RBP8.35□□□□□ -1.07
SSX4B-202ENST00000619890 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
SSX4B-202ENST00000619890 NHSQ6T4R5 1651 aa8.34□□□□□ -1.07
SSX4B-202ENST00000619890 SOX12O15370 315 aa8.34□□□□□ -1.07
SSX4B-202ENST00000619890 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
SSX4B-202ENST00000619890 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
SSX4B-202ENST00000619890 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
SSX4B-202ENST00000619890 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
SSX4B-202ENST00000619890 POTEFA5A3E0 1075 aa8.33□□□□□ -1.08
SSX4B-202ENST00000619890 RGS19P49795 217 aa8.33□□□□□ -1.08
SSX4B-202ENST00000619890 IFNLR1Q8IU57 520 aaPredicted RBP8.33□□□□□ -1.08
SSX4B-202ENST00000619890 RRAGCQ9HB90 399 aa8.33□□□□□ -1.08
SSX4B-202ENST00000619890 FLT4P35916 1363 aa8.33□□□□□ -1.08
SSX4B-202ENST00000619890 FYB1O15117 783 aa8.32□□□□□ -1.08
SSX4B-202ENST00000619890 FOXN1O15353 648 aa8.32□□□□□ -1.08
SSX4B-202ENST00000619890 SMC1BQ8NDV3 1235 aa8.32□□□□□ -1.08
SSX4B-202ENST00000619890 MAP3K19Q56UN5 1328 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 BTAF1O14981 1849 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 IP6K1Q92551 441 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 ABHD8Q96I13 439 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 TRIM35Q9UPQ4 493 aa8.31□□□□□ -1.08
SSX4B-202ENST00000619890 POTEMA6NI47 508 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 SEC24BO95487 1268 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
SSX4B-202ENST00000619890 C9orf131Q5VYM1 1079 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 POLR3GLQ9BT43 218 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
SSX4B-202ENST00000619890 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 MAP2P11137 1827 aaKnown RBP8.3□□□□□ -1.08
SSX4B-202ENST00000619890 RGPD2P0DJD1 1756 aa8.3□□□□□ -1.08
SSX4B-202ENST00000619890 KIF7Q2M1P5 1343 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 TUBGCP6Q96RT7 1819 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 IL2RBP14784 551 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 HOXC9P31274 260 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 AMPHP49418 695 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 INSRP06213 1382 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 PKD1L3Q7Z443 1732 aa8.29□□□□□ -1.08
SSX4B-202ENST00000619890 CICQ96RK0 1608 aaPredicted RBP8.29□□□□□ -1.08
SSX4B-202ENST00000619890 PLEKHG2Q9H7P9 1386 aa8.28□□□□□ -1.08
SSX4B-202ENST00000619890 POTEGQ6S5H5 508 aa8.28□□□□□ -1.08
SSX4B-202ENST00000619890 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
SSX4B-202ENST00000619890 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
SSX4B-202ENST00000619890 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
SSX4B-202ENST00000619890 NCAPD2Q15021 1401 aa8.28□□□□□ -1.08
SSX4B-202ENST00000619890 C10orf71Q711Q0 1435 aa8.28□□□□□ -1.08
SSX4B-202ENST00000619890 DOT1LQ8TEK3 1739 aa8.27□□□□□ -1.09
SSX4B-202ENST00000619890 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
SSX4B-202ENST00000619890 DDX54Q8TDD1 881 aaKnown RBP8.27□□□□□ -1.09
SSX4B-202ENST00000619890 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
SSX4B-202ENST00000619890 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms