RNA–Protein interactions for RNA: ENST00000618072.4

CDK2AP1-207, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-207ENST00000618072 PIGBQ92521 554 aa24.32■■□□□ 1.48
CDK2AP1-207ENST00000618072 BCS1LQ9Y276 419 aa24.32■■□□□ 1.48
CDK2AP1-207ENST00000618072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.31■■□□□ 1.48
CDK2AP1-207ENST00000618072 SMARCC1Q92922 1105 aaPredicted RBP24.31■■□□□ 1.48
CDK2AP1-207ENST00000618072 ARHGAP27Q6ZUM4 889 aa24.3■■□□□ 1.48
CDK2AP1-207ENST00000618072 ITGB4P16144 1822 aa24.29■■□□□ 1.48
CDK2AP1-207ENST00000618072 KCPQ6ZWJ8 1503 aa24.29■■□□□ 1.48
CDK2AP1-207ENST00000618072 ARFGEF1Q9Y6D6 1849 aa24.28■■□□□ 1.48
CDK2AP1-207ENST00000618072 C10orf71Q711Q0 1435 aa24.28■■□□□ 1.48
CDK2AP1-207ENST00000618072 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
CDK2AP1-207ENST00000618072 SSFA2P28290 1259 aa24.27■■□□□ 1.48
CDK2AP1-207ENST00000618072 SPG7Q9UQ90 795 aa24.27■■□□□ 1.48
CDK2AP1-207ENST00000618072 KDM2BQ8NHM5 1336 aa24.26■■□□□ 1.47
CDK2AP1-207ENST00000618072 TGFB2P61812 414 aa24.25■■□□□ 1.47
CDK2AP1-207ENST00000618072 C9orf131Q5VYM1 1079 aa24.25■■□□□ 1.47
CDK2AP1-207ENST00000618072 LINC00116Q8NCU8 138 aa24.25■■□□□ 1.47
CDK2AP1-207ENST00000618072 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
CDK2AP1-207ENST00000618072 ASAP1Q9ULH1 1129 aa24.24■■□□□ 1.47
CDK2AP1-207ENST00000618072 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
CDK2AP1-207ENST00000618072 LOC102724428A0A0B4J2F2 783 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 MMP10P09238 476 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 TNNT2P45379 298 aaPredicted RBP24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 SIK1P57059 783 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 EYA1Q99502 592 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 TMOD3Q9NYL9 352 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
CDK2AP1-207ENST00000618072 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
CDK2AP1-207ENST00000618072 NKX1-1Q15270 411 aaPredicted RBP24.22■■□□□ 1.47
CDK2AP1-207ENST00000618072 SMC1BQ8NDV3 1235 aa24.22■■□□□ 1.47
CDK2AP1-207ENST00000618072 GNPATO15228 680 aa24.21■■□□□ 1.47
CDK2AP1-207ENST00000618072 FCHSD2O94868 740 aa24.21■■□□□ 1.47
CDK2AP1-207ENST00000618072 ATP6V1AP38606 617 aa24.21■■□□□ 1.47
CDK2AP1-207ENST00000618072 ITPK1Q13572 414 aa24.21■■□□□ 1.47
CDK2AP1-207ENST00000618072 RRAGCQ9HB90 399 aa24.2■■□□□ 1.46
CDK2AP1-207ENST00000618072 WASHC2AQ641Q2 1341 aa24.19■■□□□ 1.46
CDK2AP1-207ENST00000618072 SBF1O95248 1867 aa24.19■■□□□ 1.46
CDK2AP1-207ENST00000618072 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
CDK2AP1-207ENST00000618072 PHKG2P15735 406 aa24.17■■□□□ 1.46
CDK2AP1-207ENST00000618072 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
CDK2AP1-207ENST00000618072 POLKQ9UBT6 870 aa24.17■■□□□ 1.46
CDK2AP1-207ENST00000618072 C4AP0C0L4 1744 aa24.16■■□□□ 1.46
CDK2AP1-207ENST00000618072 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
CDK2AP1-207ENST00000618072 DPEP1P16444 411 aa24.15■■□□□ 1.46
CDK2AP1-207ENST00000618072 RNF181Q9P0P0 153 aa24.14■■□□□ 1.45
CDK2AP1-207ENST00000618072 EIF4A2Q14240 407 aaKnown RBP24.13■■□□□ 1.45
CDK2AP1-207ENST00000618072 RBM42Q9BTD8 480 aaKnown RBP24.13■■□□□ 1.45
CDK2AP1-207ENST00000618072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.13■■□□□ 1.45
CDK2AP1-207ENST00000618072 CCDC87Q9NVE4 849 aa24.12■■□□□ 1.45
CDK2AP1-207ENST00000618072 PCDH10Q9P2E7 1040 aa24.12■■□□□ 1.45
CDK2AP1-207ENST00000618072 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
CDK2AP1-207ENST00000618072 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
CDK2AP1-207ENST00000618072 RTCBQ9Y3I0 505 aaKnown RBP24.09■■□□□ 1.45
CDK2AP1-207ENST00000618072 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.45
CDK2AP1-207ENST00000618072 NLGN1Q8N2Q7 840 aa24.08■■□□□ 1.45
CDK2AP1-207ENST00000618072 SLC4A9Q96Q91 983 aa24.08■■□□□ 1.45
CDK2AP1-207ENST00000618072 KCNA3P22001 575 aa24.07■■□□□ 1.44
CDK2AP1-207ENST00000618072 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
CDK2AP1-207ENST00000618072 ARHGEF1Q92888 912 aaKnown RBP24.06■■□□□ 1.44
CDK2AP1-207ENST00000618072 PIM2Q9P1W9 311 aa24.06■■□□□ 1.44
CDK2AP1-207ENST00000618072 CABP4P57796 275 aa24.04■■□□□ 1.44
CDK2AP1-207ENST00000618072 ERVV-2B6SEH9 535 aa24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 PLEKHO1Q53GL0 409 aaPredicted RBP24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 DALRD3Q5D0E6 543 aaKnown RBP24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 ZC3H4Q9UPT8 1303 aaKnown RBP24.03■■□□□ 1.44
CDK2AP1-207ENST00000618072 PTCD1O75127 700 aaKnown RBP24.02■■□□□ 1.44
CDK2AP1-207ENST00000618072 RFC4P35249 363 aa24.02■■□□□ 1.44
CDK2AP1-207ENST00000618072 TIAM2Q8IVF5 1701 aa24.01■■□□□ 1.43
CDK2AP1-207ENST00000618072 VEGFAP15692 232 aaPredicted RBP24.01■■□□□ 1.43
CDK2AP1-207ENST00000618072 GYS1P13807 737 aa24■■□□□ 1.43
CDK2AP1-207ENST00000618072 FAM161AQ3B820 660 aa24■■□□□ 1.43
CDK2AP1-207ENST00000618072 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
CDK2AP1-207ENST00000618072 PANK3Q9H999 370 aa24■■□□□ 1.43
CDK2AP1-207ENST00000618072 PRDM10Q9NQV6 1147 aa24■■□□□ 1.43
CDK2AP1-207ENST00000618072 COL5A3P25940 1745 aaPredicted RBP23.99■■□□□ 1.43
CDK2AP1-207ENST00000618072 RPS6KA4O75676 772 aa23.99■■□□□ 1.43
CDK2AP1-207ENST00000618072 HSP90AB1P08238 724 aaKnown RBP23.99■■□□□ 1.43
CDK2AP1-207ENST00000618072 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
CDK2AP1-207ENST00000618072 KDRP35968 1356 aa23.99■■□□□ 1.43
CDK2AP1-207ENST00000618072 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
CDK2AP1-207ENST00000618072 FOXN1O15353 648 aa23.98■■□□□ 1.43
CDK2AP1-207ENST00000618072 MTHFSP49914 203 aa23.98■■□□□ 1.43
CDK2AP1-207ENST00000618072 RC3H1Q5TC82 1133 aaKnown RBP23.98■■□□□ 1.43
CDK2AP1-207ENST00000618072 KDM6AO15550 1401 aaPredicted RBP23.97■■□□□ 1.43
CDK2AP1-207ENST00000618072 ZNF831Q5JPB2 1677 aa23.97■■□□□ 1.43
CDK2AP1-207ENST00000618072 ANKRD26Q9UPS8 1709 aa23.96■■□□□ 1.43
CDK2AP1-207ENST00000618072 GLTPD2A6NH11 291 aa23.96■■□□□ 1.43
CDK2AP1-207ENST00000618072 ADRA2BP18089 450 aa23.96■■□□□ 1.43
CDK2AP1-207ENST00000618072 NFATC2IPQ8NCF5 419 aa23.96■■□□□ 1.43
CDK2AP1-207ENST00000618072 SRP68Q9UHB9 627 aaKnown RBP23.96■■□□□ 1.43
CDK2AP1-207ENST00000618072 AMOTQ4VCS5 1084 aa23.95■■□□□ 1.42
CDK2AP1-207ENST00000618072 C1orf141Q5JVX7 400 aa23.95■■□□□ 1.42
CDK2AP1-207ENST00000618072 MORC1Q86VD1 984 aa23.95■■□□□ 1.42
CDK2AP1-207ENST00000618072 MKRN1Q9UHC7 482 aaKnown RBP23.95■■□□□ 1.42
CDK2AP1-207ENST00000618072 CNTNAP4Q9C0A0 1308 aa23.94■■□□□ 1.42
CDK2AP1-207ENST00000618072 RASSF7Q02833 373 aa23.94■■□□□ 1.42
CDK2AP1-207ENST00000618072 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
CDK2AP1-207ENST00000618072 HSPA5P11021 654 aaKnown RBP23.93■■□□□ 1.42
CDK2AP1-207ENST00000618072 CRKLP46109 303 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms