RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 NGEFQ8N5V2 710 aa29.13■■■□□ 2.25
SCUBE1-208ENST00000615096 BTAF1O14981 1849 aa29.13■■■□□ 2.25
SCUBE1-208ENST00000615096 SIPA1L3O60292 1781 aaPredicted RBP29.12■■■□□ 2.25
SCUBE1-208ENST00000615096 WWC1Q8IX03 1113 aa29.1■■■□□ 2.25
SCUBE1-208ENST00000615096 SALL2Q9Y467 1007 aaPredicted RBP29.1■■■□□ 2.25
SCUBE1-208ENST00000615096 APBA3O96018 575 aa29.09■■■□□ 2.25
SCUBE1-208ENST00000615096 TAF7Q15545 349 aaPredicted RBP29.08■■■□□ 2.25
SCUBE1-208ENST00000615096 ASAP1Q9ULH1 1129 aa29.08■■■□□ 2.25
SCUBE1-208ENST00000615096 SF3B2Q13435 895 aaKnown RBP29.07■■■□□ 2.24
SCUBE1-208ENST00000615096 ATG3Q9NT62 314 aa29.07■■■□□ 2.24
SCUBE1-208ENST00000615096 PLSCR1O15162 318 aa29.06■■■□□ 2.24
SCUBE1-208ENST00000615096 KAT6BQ8WYB5 2073 aa29.06■■■□□ 2.24
SCUBE1-208ENST00000615096 PAPPAQ13219 1627 aa29.05■■■□□ 2.24
SCUBE1-208ENST00000615096 SMARCC1Q92922 1105 aaPredicted RBP29.04■■■□□ 2.24
SCUBE1-208ENST00000615096 ZNF521Q96K83 1311 aa29.03■■■□□ 2.24
SCUBE1-208ENST00000615096 BTBD11A6QL63 1104 aa29.03■■■□□ 2.24
SCUBE1-208ENST00000615096 SLC39A6Q13433 755 aa29.03■■■□□ 2.24
SCUBE1-208ENST00000615096 PALLDQ8WX93 1383 aa29.02■■■□□ 2.24
SCUBE1-208ENST00000615096 BAG6P46379 1132 aa29.02■■■□□ 2.24
SCUBE1-208ENST00000615096 CALD1Q05682 793 aaKnown RBP29.02■■■□□ 2.24
SCUBE1-208ENST00000615096 ZNF790Q6PG37 636 aa29.01■■■□□ 2.23
SCUBE1-208ENST00000615096 WDR63Q8IWG1 891 aa29.01■■■□□ 2.23
SCUBE1-208ENST00000615096 MIS18AQ9NYP9 233 aa29.01■■■□□ 2.23
SCUBE1-208ENST00000615096 EN1Q05925 392 aaPredicted RBP29■■■□□ 2.23
SCUBE1-208ENST00000615096 DEFB132Q7Z7B7 95 aa29■■■□□ 2.23
SCUBE1-208ENST00000615096 CAMKK2Q96RR4 588 aa29■■■□□ 2.23
SCUBE1-208ENST00000615096 BABAM1Q9NWV8 329 aa29■■■□□ 2.23
SCUBE1-208ENST00000615096 RGPD3A6NKT7 1758 aaPredicted RBP29■■■□□ 2.23
SCUBE1-208ENST00000615096 RGPD4Q7Z3J3 1758 aa29■■■□□ 2.23
SCUBE1-208ENST00000615096 CHL1O00533 1208 aa28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 KCNQ3O43525 872 aa28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 ZNF853P0CG23 659 aa28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 HNRNPUQ00839 825 aaKnown RBP eCLIP28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 CFAP44Q96MT7 982 aa28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 LY75O60449 1722 aa28.99■■■□□ 2.23
SCUBE1-208ENST00000615096 IL16Q14005 1332 aa28.98■■■□□ 2.23
SCUBE1-208ENST00000615096 PROM2Q8N271 834 aa28.98■■■□□ 2.23
SCUBE1-208ENST00000615096 KCPQ6ZWJ8 1503 aa28.98■■■□□ 2.23
SCUBE1-208ENST00000615096 IFT57Q9NWB7 429 aa28.97■■■□□ 2.23
SCUBE1-208ENST00000615096 KDM3BQ7LBC6 1761 aa28.97■■■□□ 2.23
SCUBE1-208ENST00000615096 UBR2Q8IWV8 1755 aa28.96■■■□□ 2.23
SCUBE1-208ENST00000615096 EZH2Q15910 746 aaKnown RBP28.96■■■□□ 2.23
SCUBE1-208ENST00000615096 TTC5Q8N0Z6 440 aa28.96■■■□□ 2.23
SCUBE1-208ENST00000615096 TSPYL4Q9UJ04 414 aa28.96■■■□□ 2.23
SCUBE1-208ENST00000615096 LAS1LQ9Y4W2 734 aaKnown RBP28.96■■■□□ 2.23
SCUBE1-208ENST00000615096 SOCS7O14512 581 aa28.95■■■□□ 2.22
SCUBE1-208ENST00000615096 GNAI1P63096 354 aa28.95■■■□□ 2.22
SCUBE1-208ENST00000615096 TXNRD1Q16881 649 aa28.95■■■□□ 2.22
SCUBE1-208ENST00000615096 LOC102724428A0A0B4J2F2 783 aa28.94■■■□□ 2.22
SCUBE1-208ENST00000615096 PTCD1O75127 700 aaKnown RBP28.94■■■□□ 2.22
SCUBE1-208ENST00000615096 SIK1P57059 783 aa28.94■■■□□ 2.22
SCUBE1-208ENST00000615096 SLC4A9Q96Q91 983 aa28.94■■■□□ 2.22
SCUBE1-208ENST00000615096 ZNF496Q96IT1 587 aaPredicted RBP28.93■■■□□ 2.22
SCUBE1-208ENST00000615096 RBM42Q9BTD8 480 aaKnown RBP28.93■■■□□ 2.22
SCUBE1-208ENST00000615096 MBIPQ9NS73 344 aa28.92■■■□□ 2.22
SCUBE1-208ENST00000615096 ZNF831Q5JPB2 1677 aa28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 EIF4A1P60842 406 aaKnown RBP28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 SLC27A3Q5K4L6 730 aa28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 SPINK5Q9NQ38 1064 aaPredicted RBP28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 LRRC4BQ9NT99 713 aa28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 CCNL1Q9UK58 526 aaPredicted RBP28.91■■■□□ 2.22
SCUBE1-208ENST00000615096 FMNL2Q96PY5 1086 aa28.9■■■□□ 2.22
SCUBE1-208ENST00000615096 RREB1Q92766 1687 aa28.89■■■□□ 2.22
SCUBE1-208ENST00000615096 HEG1Q9ULI3 1381 aa28.89■■■□□ 2.22
SCUBE1-208ENST00000615096 KCNQ4P56696 695 aa28.89■■■□□ 2.22
SCUBE1-208ENST00000615096 GOLGA2Q08379 1002 aa28.89■■■□□ 2.22
SCUBE1-208ENST00000615096 CICQ96RK0 1608 aaPredicted RBP28.88■■■□□ 2.21
SCUBE1-208ENST00000615096 ATP6V1AP38606 617 aa28.88■■■□□ 2.21
SCUBE1-208ENST00000615096 VSIG10Q8N0Z9 540 aa28.88■■■□□ 2.21
SCUBE1-208ENST00000615096 ITPK1Q13572 414 aa28.87■■■□□ 2.21
SCUBE1-208ENST00000615096 TSR2Q969E8 191 aaKnown RBP28.86■■■□□ 2.21
SCUBE1-208ENST00000615096 ZBED9Q6R2W3 1325 aa28.86■■■□□ 2.21
SCUBE1-208ENST00000615096 TJP1Q07157 1748 aa28.85■■■□□ 2.21
SCUBE1-208ENST00000615096 SLFN5Q08AF3 891 aa28.83■■■□□ 2.21
SCUBE1-208ENST00000615096 CDCA7LQ96GN5 454 aa28.83■■■□□ 2.21
SCUBE1-208ENST00000615096 FANCIQ9NVI1 1328 aa28.83■■■□□ 2.21
SCUBE1-208ENST00000615096 NUP188Q5SRE5 1749 aa28.83■■■□□ 2.21
SCUBE1-208ENST00000615096 E9PSI1 815 aa28.82■■■□□ 2.2
SCUBE1-208ENST00000615096 GIGYF1O75420 1035 aaPredicted RBP28.82■■■□□ 2.2
SCUBE1-208ENST00000615096 SNRPA1P09661 255 aaKnown RBP28.82■■■□□ 2.2
SCUBE1-208ENST00000615096 DNAJC10Q8IXB1 793 aa28.82■■■□□ 2.2
SCUBE1-208ENST00000615096 MYH16Q9H6N6 1097 aa28.82■■■□□ 2.2
SCUBE1-208ENST00000615096 PRAMEF22A3QJZ6 481 aa28.81■■■□□ 2.2
SCUBE1-208ENST00000615096 KRT24Q2M2I5 525 aa28.81■■■□□ 2.2
SCUBE1-208ENST00000615096 LINC00116Q8NCU8 138 aa28.81■■■□□ 2.2
SCUBE1-208ENST00000615096 TAF1LQ8IZX4 1826 aa28.8■■■□□ 2.2
SCUBE1-208ENST00000615096 C5P01031 1676 aa28.8■■■□□ 2.2
SCUBE1-208ENST00000615096 TRMT2AQ8IZ69 625 aaKnown RBP28.8■■■□□ 2.2
SCUBE1-208ENST00000615096 TEX13AQ9BXU3 409 aaPredicted RBP28.79■■■□□ 2.2
SCUBE1-208ENST00000615096 COL5A3P25940 1745 aaPredicted RBP28.79■■■□□ 2.2
SCUBE1-208ENST00000615096 CYP19A1P11511 503 aaPredicted RBP28.78■■■□□ 2.2
SCUBE1-208ENST00000615096 HMGB2P26583 209 aaKnown RBP28.78■■■□□ 2.2
SCUBE1-208ENST00000615096 USP16Q9Y5T5 823 aa28.78■■■□□ 2.2
SCUBE1-208ENST00000615096 C8orf58Q8NAV2 365 aa28.77■■■□□ 2.2
SCUBE1-208ENST00000615096 C4BP0C0L5 1744 aa28.76■■■□□ 2.19
SCUBE1-208ENST00000615096 DUSP27Q5VZP5 1158 aa28.75■■■□□ 2.19
SCUBE1-208ENST00000615096 CNTNAP4Q9C0A0 1308 aa28.74■■■□□ 2.19
SCUBE1-208ENST00000615096 STARD3NLO95772 234 aa28.74■■■□□ 2.19
SCUBE1-208ENST00000615096 HOXB7P09629 217 aa28.74■■■□□ 2.19
SCUBE1-208ENST00000615096 RC3H1Q5TC82 1133 aaKnown RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms