RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 COG3Q96JB2 828 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 KRT32Q14532 448 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 STAMBPO95630 424 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 FAM114A1Q8IWE2 563 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 CTAGE9A4FU28 777 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 EIF5P55010 431 aaKnown RBP15.97■□□□□ 0.15
CHD1-212ENST00000614616 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.15
CHD1-212ENST00000614616 ZNF830Q96NB3 372 aaPredicted RBP15.96■□□□□ 0.15
CHD1-212ENST00000614616 TAOK3Q9H2K8 898 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 GOPCQ9HD26 462 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 STK3Q13188 491 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.15
CHD1-212ENST00000614616 A6NNZ2 444 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 TUBB8Q3ZCM7 444 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
CHD1-212ENST00000614616 MIPOL1Q8TD10 442 aa15.96■□□□□ 0.15
CHD1-212ENST00000614616 GOLIM4O00461 696 aa15.96■□□□□ 0.14
CHD1-212ENST00000614616 ALS2CR12Q96Q35 445 aa15.96■□□□□ 0.14
CHD1-212ENST00000614616 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.14
CHD1-212ENST00000614616 NUP133Q8WUM0 1156 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
CHD1-212ENST00000614616 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 CEP131Q9UPN4 1083 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 MX1P20591 662 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 NEBLO76041 1014 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 IGSF3O75054 1194 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 ZNF165P49910 485 aa15.95■□□□□ 0.14
CHD1-212ENST00000614616 DNAJC21Q5F1R6 531 aaKnown RBP15.95■□□□□ 0.14
CHD1-212ENST00000614616 CCDC12Q8WUD4 166 aaPredicted RBP15.94■□□□□ 0.14
CHD1-212ENST00000614616 KIF3CO14782 793 aa15.94■□□□□ 0.14
CHD1-212ENST00000614616 GNG11P61952 73 aa15.94■□□□□ 0.14
CHD1-212ENST00000614616 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
CHD1-212ENST00000614616 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
CHD1-212ENST00000614616 CCDC114Q96M63 670 aa15.94■□□□□ 0.14
CHD1-212ENST00000614616 NUP88Q99567 741 aaPredicted RBP15.94■□□□□ 0.14
CHD1-212ENST00000614616 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
CHD1-212ENST00000614616 CCT4P50991 539 aaKnown RBP15.94■□□□□ 0.14
CHD1-212ENST00000614616 TMX4Q9H1E5 349 aaPredicted RBP15.94■□□□□ 0.14
CHD1-212ENST00000614616 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■■■□□ 18.3
CHD1-212ENST00000614616 CLNS1AP54105 237 aaKnown RBP15.93■□□□□ 0.14
CHD1-212ENST00000614616 MAATS1Q7Z4T9 603 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 TRIM22Q8IYM9 498 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 CCDC6Q16204 474 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 SKILP12757 684 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
CHD1-212ENST00000614616 GTF3C6Q969F1 213 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.143e-7■■■□□ 19.1
CHD1-212ENST00000614616 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
CHD1-212ENST00000614616 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
CHD1-212ENST00000614616 TANGO6Q9C0B7 1094 aa15.93■□□□□ 0.14
CHD1-212ENST00000614616 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 CCDC178Q5BJE1 867 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 CKAP2LQ8IYA6 745 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 SNX21Q969T3 373 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 HLTFQ14527 1009 aaKnown RBP eCLIP15.92■□□□□ 0.143e-10■■■■□ 20.8
CHD1-212ENST00000614616 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 TRAK1Q9UPV9 953 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 ZFYP08048 801 aaPredicted RBP15.92■□□□□ 0.14
CHD1-212ENST00000614616 FAM76AQ8TAV0 307 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 SH2D4BQ5SQS7 431 aa15.92■□□□□ 0.14
CHD1-212ENST00000614616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.92■□□□□ 0.148e-10■■■□□ 17.2
CHD1-212ENST00000614616 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
CHD1-212ENST00000614616 ERO1AQ96HE7 468 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 CFAP65Q6ZU64 1925 aaKnown RBP15.91■□□□□ 0.14
CHD1-212ENST00000614616 YEATS4O95619 227 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 TTC12Q9H892 705 aaPredicted RBP15.91■□□□□ 0.14
CHD1-212ENST00000614616 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 ATP11AP98196 1134 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
CHD1-212ENST00000614616 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 CCDC160A6NGH7 325 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 SURF6O75683 361 aaKnown RBP15.9■□□□□ 0.14
CHD1-212ENST00000614616 EIF2S2P20042 333 aaKnown RBP15.9■□□□□ 0.14
CHD1-212ENST00000614616 TEFQ10587 303 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 RPAINQ86UA6 219 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 TMX1Q9H3N1 280 aa15.9■□□□□ 0.14
CHD1-212ENST00000614616 STMN4Q9H169 189 aaPredicted RBP15.89■□□□□ 0.13
CHD1-212ENST00000614616 STX6O43752 255 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 BUB1BO60566 1050 aaPredicted RBP15.89■□□□□ 0.13
CHD1-212ENST00000614616 JADE2Q9NQC1 790 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 AP1ARQ63HQ0 302 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 NECTIN2Q92692 538 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 ARHGAP25P42331 645 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 ANO6Q4KMQ2 910 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 FKBP15Q5T1M5 1219 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 AFAP1L1Q8TED9 768 aa15.89■□□□□ 0.13
CHD1-212ENST00000614616 SUDS3Q9H7L9 328 aaPredicted RBP15.89■□□□□ 0.13
CHD1-212ENST00000614616 CTAGE15A4D2H0 777 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms