RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 MEIS3Q99687 375 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 TMX1Q9H3N1 280 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 XBP1P17861 261 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 FAM193AP78312 1265 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 SART3Q15020 963 aaKnown RBP16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
RPS6KC1-208ENST00000614059 NUCB1Q02818 461 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 STX6O43752 255 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 ANXA1P04083 346 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 WDR62O43379 1518 aa16.42■□□□□ 0.22
RPS6KC1-208ENST00000614059 ZNF165P49910 485 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 ISM2Q6H9L7 571 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 ZBTB9Q96C00 473 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 SCAND2PQ9GZW5 306 aaPredicted RBP16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 BRMS1Q9HCU9 246 aa16.41■□□□□ 0.22
RPS6KC1-208ENST00000614059 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 DTNBO60941 627 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 SMARCE1Q969G3 411 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 CCP110O43303 1012 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 KLHL10Q6JEL2 608 aa16.4■□□□□ 0.22
RPS6KC1-208ENST00000614059 GJB2P29033 226 aa16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 ERCC4Q92889 916 aaPredicted RBP16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 TMCO3Q6UWJ1 677 aa16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
RPS6KC1-208ENST00000614059 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 RALGAPBQ86X10 1494 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 FLIIQ13045 1269 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 CENPHQ9H3R5 247 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 IFT140Q96RY7 1462 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
RPS6KC1-208ENST00000614059 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 IDH1O75874 414 aaKnown RBP16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 KRT32Q14532 448 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 NOLC1Q14978 699 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 KRT24Q2M2I5 525 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 TESK2Q96S53 571 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 ZKSCAN5Q9Y2L8 839 aa16.37■□□□□ 0.21
RPS6KC1-208ENST00000614059 ABCC11Q96J66 1382 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 EPS15P42566 896 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 CPLX3Q8WVH0 158 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 USP48Q86UV5 1035 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 CCDC186Q7Z3E2 898 aa16.36■□□□□ 0.21
RPS6KC1-208ENST00000614059 DNMT1P26358 1616 aaKnown RBP16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.215e-6■■■■□ 24.4
RPS6KC1-208ENST00000614059 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 MAGEC2Q9UBF1 373 aaPredicted RBP16.35■□□□□ 0.21
RPS6KC1-208ENST00000614059 IDI1Q13907 227 aa16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 FSIP1Q8NA03 581 aa16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 LRRC2Q9BYS8 371 aa16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
RPS6KC1-208ENST00000614059 ZNHIT6Q9NWK9 470 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms