RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 TMEM87AQ8NBN3 555 aa16.66■□□□□ 0.26
UBE2F-223ENST00000612130 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
UBE2F-223ENST00000612130 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
UBE2F-223ENST00000612130 MYRIPQ8NFW9 859 aa16.66■□□□□ 0.26
UBE2F-223ENST00000612130 PRIMPOLQ96LW4 560 aa16.66■□□□□ 0.26
UBE2F-223ENST00000612130 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
UBE2F-223ENST00000612130 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBE2F-223ENST00000612130 CRB1P82279 1406 aa16.65■□□□□ 0.26
UBE2F-223ENST00000612130 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 PALD1Q9ULE6 856 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 MX1P20591 662 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 CHMLP26374 656 aa16.64■□□□□ 0.25
UBE2F-223ENST00000612130 HMGN5P82970 282 aaKnown RBP16.64■□□□□ 0.25
UBE2F-223ENST00000612130 AOX1Q06278 1338 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 GNAI2P04899 355 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 LRRCC1Q9C099 1032 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 LETM1O95202 739 aaPredicted RBP16.63■□□□□ 0.25
UBE2F-223ENST00000612130 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
UBE2F-223ENST00000612130 CCDC183Q5T5S1 534 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
UBE2F-223ENST00000612130 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
UBE2F-223ENST00000612130 GTF2F1P35269 517 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBE2F-223ENST00000612130 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
UBE2F-223ENST00000612130 AEBP1Q8IUX7 1158 aa16.62■□□□□ 0.25
UBE2F-223ENST00000612130 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
UBE2F-223ENST00000612130 MCM10Q7L590 875 aa16.61■□□□□ 0.25
UBE2F-223ENST00000612130 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
UBE2F-223ENST00000612130 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
UBE2F-223ENST00000612130 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
UBE2F-223ENST00000612130 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
UBE2F-223ENST00000612130 NUDT16Q96DE0 195 aaKnown RBP16.6■□□□□ 0.25
UBE2F-223ENST00000612130 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
UBE2F-223ENST00000612130 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
UBE2F-223ENST00000612130 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
UBE2F-223ENST00000612130 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
UBE2F-223ENST00000612130 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
UBE2F-223ENST00000612130 GNAI3P08754 354 aa16.59■□□□□ 0.25
UBE2F-223ENST00000612130 DNTTIP2Q5QJE6 756 aaKnown RBP16.59■□□□□ 0.25
UBE2F-223ENST00000612130 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
UBE2F-223ENST00000612130 SPTLC3Q9NUV7 552 aa16.59■□□□□ 0.25
UBE2F-223ENST00000612130 NOLC1Q14978 699 aaKnown RBP eCLIP16.58■□□□□ 0.25
UBE2F-223ENST00000612130 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 OSCARQ8IYS5 282 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 OVOS2A0A0J9YW53 1432 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 TECPR2O15040 1411 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 OVOS2Q6IE36 1432 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.25
UBE2F-223ENST00000612130 FAM208AQ9UK61 1670 aaKnown RBP16.58■□□□□ 0.24
UBE2F-223ENST00000612130 HSPA4P34932 840 aa16.58■□□□□ 0.24
UBE2F-223ENST00000612130 TSHZ3Q63HK5 1081 aa16.58■□□□□ 0.24
UBE2F-223ENST00000612130 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.24
UBE2F-223ENST00000612130 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
UBE2F-223ENST00000612130 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 UPF3BQ9BZI7 483 aaKnown RBP16.57■□□□□ 0.24
UBE2F-223ENST00000612130 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 TTC21BQ7Z4L5 1316 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 F6X3S4 739 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 ADCY5O95622 1261 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 UBE2HP62256 183 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
UBE2F-223ENST00000612130 G2E3Q7L622 706 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
UBE2F-223ENST00000612130 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
UBE2F-223ENST00000612130 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
UBE2F-223ENST00000612130 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
UBE2F-223ENST00000612130 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
UBE2F-223ENST00000612130 ATP6V1DQ9Y5K8 247 aa16.55■□□□□ 0.24
UBE2F-223ENST00000612130 LRRC37A3O60309 1634 aa16.55■□□□□ 0.24
UBE2F-223ENST00000612130 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
UBE2F-223ENST00000612130 RAD50Q92878 1312 aa16.54■□□□□ 0.24
UBE2F-223ENST00000612130 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
UBE2F-223ENST00000612130 TPM3P06753 285 aa16.54■□□□□ 0.24
UBE2F-223ENST00000612130 KDM4AO75164 1064 aa16.53■□□□□ 0.24
UBE2F-223ENST00000612130 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
UBE2F-223ENST00000612130 ZNF710Q8N1W2 664 aa16.53■□□□□ 0.24
UBE2F-223ENST00000612130 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
UBE2F-223ENST00000612130 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
UBE2F-223ENST00000612130 METP08581 1390 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
UBE2F-223ENST00000612130 FOXD4L6Q3SYB3 417 aaPredicted RBP16.52■□□□□ 0.24
UBE2F-223ENST00000612130 FOXD4L3Q6VB84 417 aaPredicted RBP16.52■□□□□ 0.24
UBE2F-223ENST00000612130 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
UBE2F-223ENST00000612130 TTC14Q96N46 770 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 TTC12Q9H892 705 aaPredicted RBP16.52■□□□□ 0.24
UBE2F-223ENST00000612130 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
UBE2F-223ENST00000612130 USP31Q70CQ4 1352 aa16.52■□□□□ 0.23
UBE2F-223ENST00000612130 FLIIQ13045 1269 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms