RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SIK1P57059 783 aa34.68■■■■□ 3.14
VEGFA-226ENST00000611736 MAP3K5Q99683 1374 aa34.68■■■■□ 3.14
VEGFA-226ENST00000611736 TAF1LQ8IZX4 1826 aa34.67■■■■□ 3.14
VEGFA-226ENST00000611736 GNAT3A8MTJ3 354 aa34.65■■■■□ 3.14
VEGFA-226ENST00000611736 SLC52A2Q9HAB3 445 aa34.65■■■■□ 3.14
VEGFA-226ENST00000611736 TFCP2L1Q9NZI6 479 aa34.65■■■■□ 3.14
VEGFA-226ENST00000611736 ADAMTS7Q9UKP4 1686 aa34.64■■■■□ 3.14
VEGFA-226ENST00000611736 TUBGCP6Q96RT7 1819 aa34.64■■■■□ 3.14
VEGFA-226ENST00000611736 RBM42Q9BTD8 480 aaKnown RBP34.63■■■■□ 3.13
VEGFA-226ENST00000611736 MRC1P22897 1456 aa34.63■■■■□ 3.13
VEGFA-226ENST00000611736 ZBTB7AO95365 584 aa34.61■■■■□ 3.13
VEGFA-226ENST00000611736 ATP6V1AP38606 617 aa34.61■■■■□ 3.13
VEGFA-226ENST00000611736 C4BP0C0L5 1744 aa34.59■■■■□ 3.13
VEGFA-226ENST00000611736 QSER1Q2KHR3 1735 aa34.59■■■■□ 3.13
VEGFA-226ENST00000611736 ITPK1Q13572 414 aa34.59■■■■□ 3.13
VEGFA-226ENST00000611736 IL17REQ8NFR9 667 aa34.59■■■■□ 3.13
VEGFA-226ENST00000611736 NEFMP07197 916 aa34.58■■■■□ 3.13
VEGFA-226ENST00000611736 HMGB2P26583 209 aaKnown RBP34.58■■■■□ 3.13
VEGFA-226ENST00000611736 LINC00116Q8NCU8 138 aa34.58■■■■□ 3.13
VEGFA-226ENST00000611736 SPON1Q9HCB6 807 aa34.58■■■■□ 3.13
VEGFA-226ENST00000611736 PNPLA7Q6ZV29 1317 aa34.57■■■■□ 3.13
VEGFA-226ENST00000611736 PTCD1O75127 700 aaKnown RBP34.57■■■■□ 3.12
VEGFA-226ENST00000611736 SLC4A9Q96Q91 983 aa34.57■■■■□ 3.12
VEGFA-226ENST00000611736 AK7Q96M32 723 aa34.55■■■■□ 3.12
VEGFA-226ENST00000611736 PLEKHF1Q96S99 279 aa34.55■■■■□ 3.12
VEGFA-226ENST00000611736 TEFQ10587 303 aa34.54■■■■□ 3.12
VEGFA-226ENST00000611736 SLC39A6Q13433 755 aa34.54■■■■□ 3.12
VEGFA-226ENST00000611736 ATF5Q9Y2D1 282 aaPredicted RBP34.54■■■■□ 3.12
VEGFA-226ENST00000611736 PNNQ9H307 717 aaKnown RBP34.53■■■■□ 3.12
VEGFA-226ENST00000611736 RTF1Q92541 710 aaKnown RBP34.52■■■■□ 3.12
VEGFA-226ENST00000611736 MAPK8IP3Q9UPT6 1336 aa34.52■■■■□ 3.12
VEGFA-226ENST00000611736 ZNF831Q5JPB2 1677 aa34.5■■■■□ 3.11
VEGFA-226ENST00000611736 CEMIPQ8WUJ3 1361 aa34.5■■■■□ 3.11
VEGFA-226ENST00000611736 MSH5O43196 834 aa34.5■■■■□ 3.11
VEGFA-226ENST00000611736 WDR43Q15061 677 aaKnown RBP eCLIP34.5■■■■□ 3.118e-10■□□□□ 9.2
VEGFA-226ENST00000611736 MTFR1LQ9H019 292 aa34.5■■■■□ 3.11
VEGFA-226ENST00000611736 MCM10Q7L590 875 aa34.49■■■■□ 3.11
VEGFA-226ENST00000611736 SIPA1L3O60292 1781 aaPredicted RBP34.49■■■■□ 3.11
VEGFA-226ENST00000611736 DLG5Q8TDM6 1919 aa34.48■■■■□ 3.11
VEGFA-226ENST00000611736 COL23A1Q86Y22 540 aaPredicted RBP34.48■■■■□ 3.11
VEGFA-226ENST00000611736 UBR3Q6ZT12 1888 aa34.48■■■■□ 3.11
VEGFA-226ENST00000611736 DCTN1Q14203 1278 aa34.47■■■■□ 3.11
VEGFA-226ENST00000611736 AMIGO3Q86WK7 504 aa34.47■■■■□ 3.11
VEGFA-226ENST00000611736 NFE2L2Q16236 605 aa34.46■■■■□ 3.11
VEGFA-226ENST00000611736 SMIM5Q71RC9 77 aa34.46■■■■□ 3.11
VEGFA-226ENST00000611736 COL5A3P25940 1745 aaPredicted RBP34.45■■■■□ 3.11
VEGFA-226ENST00000611736 GNPATO15228 680 aa34.45■■■■□ 3.11
VEGFA-226ENST00000611736 PHF14O94880 888 aa34.45■■■■□ 3.11
VEGFA-226ENST00000611736 PPP1R1BQ9UD71 204 aaPredicted RBP34.45■■■■□ 3.11
VEGFA-226ENST00000611736 KCPQ6ZWJ8 1503 aa34.45■■■■□ 3.1
VEGFA-226ENST00000611736 ANP32CO43423 234 aa34.44■■■■□ 3.1
VEGFA-226ENST00000611736 HTATSF1O43719 755 aaKnown RBP34.44■■■■□ 3.1
VEGFA-226ENST00000611736 TJP1Q07157 1748 aa34.44■■■■□ 3.1
VEGFA-226ENST00000611736 PTGER2P43116 358 aa34.43■■■■□ 3.1
VEGFA-226ENST00000611736 CCDC146Q8IYE0 955 aa34.43■■■■□ 3.1
VEGFA-226ENST00000611736 TTC5Q8N0Z6 440 aa34.43■■■■□ 3.1
VEGFA-226ENST00000611736 FLAD1Q8NFF5 587 aa34.43■■■■□ 3.1
VEGFA-226ENST00000611736 SLC16A10Q8TF71 515 aa34.43■■■■□ 3.1
VEGFA-226ENST00000611736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.41■■■■□ 3.1
VEGFA-226ENST00000611736 ADAMTS8Q9UP79 889 aa34.41■■■■□ 3.1
VEGFA-226ENST00000611736 UBR2Q8IWV8 1755 aa34.41■■■■□ 3.1
VEGFA-226ENST00000611736 CNTNAP4Q9C0A0 1308 aa34.4■■■■□ 3.1
VEGFA-226ENST00000611736 MYH14Q7Z406 1995 aaKnown RBP34.4■■■■□ 3.1
VEGFA-226ENST00000611736 BTBD11A6QL63 1104 aa34.39■■■■□ 3.1
VEGFA-226ENST00000611736 ZNF790Q6PG37 636 aa34.39■■■■□ 3.1
VEGFA-226ENST00000611736 DNAJC10Q8IXB1 793 aa34.39■■■■□ 3.1
VEGFA-226ENST00000611736 CICQ96RK0 1608 aaPredicted RBP34.38■■■■□ 3.09
VEGFA-226ENST00000611736 SSFA2P28290 1259 aa34.38■■■■□ 3.09
VEGFA-226ENST00000611736 RC3H1Q5TC82 1133 aaKnown RBP34.38■■■■□ 3.09
VEGFA-226ENST00000611736 CRKLP46109 303 aaKnown RBP34.36■■■■□ 3.09
VEGFA-226ENST00000611736 CCDC184Q52MB2 194 aa34.36■■■■□ 3.09
VEGFA-226ENST00000611736 SGIP1Q9BQI5 828 aa34.36■■■■□ 3.09
VEGFA-226ENST00000611736 RTCBQ9Y3I0 505 aaKnown RBP34.36■■■■□ 3.09
VEGFA-226ENST00000611736 KCNQ3O43525 872 aa34.35■■■■□ 3.09
VEGFA-226ENST00000611736 MSL1Q68DK7 614 aa34.35■■■■□ 3.09
VEGFA-226ENST00000611736 ZNF496Q96IT1 587 aaPredicted RBP34.35■■■■□ 3.09
VEGFA-226ENST00000611736 RIPK4P57078 832 aa34.34■■■■□ 3.09
VEGFA-226ENST00000611736 RUNDC1Q96C34 613 aa34.34■■■■□ 3.09
VEGFA-226ENST00000611736 THUMPD2Q9BTF0 503 aaKnown RBP34.34■■■■□ 3.09
VEGFA-226ENST00000611736 TMPOP42166 694 aaKnown RBP34.33■■■■□ 3.09
VEGFA-226ENST00000611736 VSIG10Q8N0Z9 540 aa34.33■■■■□ 3.09
VEGFA-226ENST00000611736 RRP7AQ9Y3A4 280 aaKnown RBP34.33■■■■□ 3.09
VEGFA-226ENST00000611736 COL24A1Q17RW2 1714 aa34.31■■■■□ 3.08
VEGFA-226ENST00000611736 RPS6KA4O75676 772 aa34.31■■■■□ 3.08
VEGFA-226ENST00000611736 POLD1P28340 1107 aa34.31■■■■□ 3.08
VEGFA-226ENST00000611736 TAF7Q15545 349 aaPredicted RBP34.31■■■■□ 3.08
VEGFA-226ENST00000611736 FMNL2Q96PY5 1086 aa34.31■■■■□ 3.08
VEGFA-226ENST00000611736 TRAPPC3LQ5T215 181 aa34.3■■■■□ 3.08
VEGFA-226ENST00000611736 HEG1Q9ULI3 1381 aa34.3■■■■□ 3.08
VEGFA-226ENST00000611736 CYP19A1P11511 503 aaPredicted RBP34.29■■■■□ 3.08
VEGFA-226ENST00000611736 NEUROD2Q15784 382 aa34.29■■■■□ 3.08
VEGFA-226ENST00000611736 INTS5Q6P9B9 1019 aaKnown RBP34.29■■■■□ 3.08
VEGFA-226ENST00000611736 ARXQ96QS3 562 aa34.29■■■■□ 3.08
VEGFA-226ENST00000611736 CCDC87Q9NVE4 849 aa34.29■■■■□ 3.08
VEGFA-226ENST00000611736 MIS18AQ9NYP9 233 aa34.28■■■■□ 3.08
VEGFA-226ENST00000611736 ADRA2BP18089 450 aa34.26■■■■□ 3.08
VEGFA-226ENST00000611736 ARHGEF1Q92888 912 aaKnown RBP34.26■■■■□ 3.08
VEGFA-226ENST00000611736 MRS2Q9HD23 443 aa34.26■■■■□ 3.08
VEGFA-226ENST00000611736 LMOD3Q0VAK6 560 aa34.25■■■■□ 3.07
VEGFA-226ENST00000611736 STARD3NLO95772 234 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms