RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
USP6NL-206ENST00000609853 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
USP6NL-206ENST00000609853 GNAI3P08754 354 aa14.91□□□□□ -0.02
USP6NL-206ENST00000609853 XPCQ01831 940 aaPredicted RBP14.91□□□□□ -0.02
USP6NL-206ENST00000609853 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
USP6NL-206ENST00000609853 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
USP6NL-206ENST00000609853 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
USP6NL-206ENST00000609853 TEFQ10587 303 aa14.9□□□□□ -0.02
USP6NL-206ENST00000609853 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
USP6NL-206ENST00000609853 G2E3Q7L622 706 aa14.9□□□□□ -0.02
USP6NL-206ENST00000609853 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
USP6NL-206ENST00000609853 MEIS3Q99687 375 aa14.89□□□□□ -0.03
USP6NL-206ENST00000609853 ERBB3P21860 1342 aa14.89□□□□□ -0.03
USP6NL-206ENST00000609853 GNAI2P04899 355 aa14.89□□□□□ -0.03
USP6NL-206ENST00000609853 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
USP6NL-206ENST00000609853 HDGFL1Q5TGJ6 251 aa14.89□□□□□ -0.03
USP6NL-206ENST00000609853 LRRC59Q96AG4 307 aaKnown RBP14.89□□□□□ -0.03
USP6NL-206ENST00000609853 C22orf23Q9BZE7 217 aa14.89□□□□□ -0.03
USP6NL-206ENST00000609853 RGPD5Q99666 1765 aa14.88□□□□□ -0.03
USP6NL-206ENST00000609853 ADAMTS7Q9UKP4 1686 aa14.88□□□□□ -0.03
USP6NL-206ENST00000609853 SLC4A10Q6U841 1118 aa14.88□□□□□ -0.03
USP6NL-206ENST00000609853 TNS3Q68CZ2 1445 aa14.87□□□□□ -0.03
USP6NL-206ENST00000609853 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
USP6NL-206ENST00000609853 NBR1Q14596 966 aa14.87□□□□□ -0.03
USP6NL-206ENST00000609853 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
USP6NL-206ENST00000609853 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
USP6NL-206ENST00000609853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.03
USP6NL-206ENST00000609853 SIPA1L3O60292 1781 aaPredicted RBP14.86□□□□□ -0.03
USP6NL-206ENST00000609853 F6X3S4 739 aa14.86□□□□□ -0.03
USP6NL-206ENST00000609853 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
USP6NL-206ENST00000609853 COL18A1P39060 1754 aa14.86□□□□□ -0.03
USP6NL-206ENST00000609853 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
USP6NL-206ENST00000609853 RBM25P49756 843 aaKnown RBP14.85□□□□□ -0.03
USP6NL-206ENST00000609853 MFAP1P55081 439 aaKnown RBP14.85□□□□□ -0.03
USP6NL-206ENST00000609853 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
USP6NL-206ENST00000609853 PLEKHM2Q8IWE5 1019 aa14.85□□□□□ -0.03
USP6NL-206ENST00000609853 CRYBG1Q9Y4K1 1723 aa14.85□□□□□ -0.03
USP6NL-206ENST00000609853 PXDNQ92626 1479 aa14.84□□□□□ -0.03
USP6NL-206ENST00000609853 CPDO75976 1380 aa14.84□□□□□ -0.03
USP6NL-206ENST00000609853 XIRP1Q702N8 1843 aaKnown RBP14.84□□□□□ -0.03
USP6NL-206ENST00000609853 CDC45O75419 566 aa14.83□□□□□ -0.03
USP6NL-206ENST00000609853 MPRIPQ6WCQ1 1025 aa14.83□□□□□ -0.03
USP6NL-206ENST00000609853 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.03
USP6NL-206ENST00000609853 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
USP6NL-206ENST00000609853 SPATA31A3Q5VYP0 1347 aa14.83□□□□□ -0.04
USP6NL-206ENST00000609853 ZC3H6P61129 1189 aaKnown RBP14.83□□□□□ -0.04
USP6NL-206ENST00000609853 TTC22Q5TAA0 569 aa14.83□□□□□ -0.04
USP6NL-206ENST00000609853 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
USP6NL-206ENST00000609853 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
USP6NL-206ENST00000609853 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
USP6NL-206ENST00000609853 SCN11AQ9UI33 1791 aa14.82□□□□□ -0.04
USP6NL-206ENST00000609853 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
USP6NL-206ENST00000609853 NECTIN2Q92692 538 aa14.81□□□□□ -0.04
USP6NL-206ENST00000609853 TBC1D9Q6ZT07 1266 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 SRCIN1Q9C0H9 1055 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 OSBPL3Q9H4L5 887 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 HDAC5Q9UQL6 1122 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 UBTFL1P0CB47 393 aaPredicted RBP14.8□□□□□ -0.04
USP6NL-206ENST00000609853 EIF2S2P20042 333 aaKnown RBP14.8□□□□□ -0.04
USP6NL-206ENST00000609853 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 NLRP2Q9NX02 1062 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
USP6NL-206ENST00000609853 GIGYF1O75420 1035 aaPredicted RBP14.79□□□□□ -0.04
USP6NL-206ENST00000609853 CASC1Q6TDU7 716 aa14.79□□□□□ -0.04
USP6NL-206ENST00000609853 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
USP6NL-206ENST00000609853 GSPT1P15170 499 aaKnown RBP14.78□□□□□ -0.04
USP6NL-206ENST00000609853 HSPA2P54652 639 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 DNAAF4Q8WXU2 420 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 SNX21Q969T3 373 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
USP6NL-206ENST00000609853 CHPF2Q9P2E5 772 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 PKD1L3Q7Z443 1732 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 LRRCC1Q9C099 1032 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
USP6NL-206ENST00000609853 IBTKQ9P2D0 1353 aaPredicted RBP14.77□□□□□ -0.05
USP6NL-206ENST00000609853 KCNQ3O43525 872 aa14.77□□□□□ -0.05
USP6NL-206ENST00000609853 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
USP6NL-206ENST00000609853 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 PHKG2P15735 406 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 BRINP3Q76B58 766 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 HSCBQ8IWL3 235 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 SLC52A2Q9HAB3 445 aa14.76□□□□□ -0.05
USP6NL-206ENST00000609853 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
USP6NL-206ENST00000609853 PI4KAP2A4QPH2 592 aa14.75□□□□□ -0.05
USP6NL-206ENST00000609853 C16orf71Q8IYS4 520 aaPredicted RBP14.75□□□□□ -0.05
USP6NL-206ENST00000609853 PI4KAP1Q8N8J0 262 aa14.75□□□□□ -0.05
USP6NL-206ENST00000609853 DDX17Q92841 729 aaKnown RBP14.75□□□□□ -0.05
USP6NL-206ENST00000609853 DCAF5Q96JK2 942 aa14.75□□□□□ -0.05
USP6NL-206ENST00000609853 MRC1P22897 1456 aa14.75□□□□□ -0.05
USP6NL-206ENST00000609853 DDX58O95786 925 aaKnown RBP14.75□□□□□ -0.05
USP6NL-206ENST00000609853 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
USP6NL-206ENST00000609853 MEGF6O75095 1541 aa14.74□□□□□ -0.05
USP6NL-206ENST00000609853 AOX1Q06278 1338 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms