RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 RRS1Q15050 365 aaKnown RBP27.18■■□□□ 1.94
SHANK2-220ENST00000608988 FBXO31Q5XUX0 539 aaPredicted RBP27.18■■□□□ 1.94
SHANK2-220ENST00000608988 NRXN3Q9Y4C0 1643 aa27.18■■□□□ 1.94
SHANK2-220ENST00000608988 EIF4A2Q14240 407 aaKnown RBP27.17■■□□□ 1.94
SHANK2-220ENST00000608988 ZRANB1Q9UGI0 708 aa27.17■■□□□ 1.94
SHANK2-220ENST00000608988 GNAI2P04899 355 aa27.17■■□□□ 1.94
SHANK2-220ENST00000608988 UQCRHLA0A096LP55 91 aa27.16■■□□□ 1.94
SHANK2-220ENST00000608988 UQCRHP07919 91 aa27.16■■□□□ 1.94
SHANK2-220ENST00000608988 SULT6B1Q6IMI4 303 aa27.16■■□□□ 1.94
SHANK2-220ENST00000608988 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
SHANK2-220ENST00000608988 XPCQ01831 940 aaPredicted RBP27.15■■□□□ 1.94
SHANK2-220ENST00000608988 FAM69CQ0P6D2 419 aa27.15■■□□□ 1.94
SHANK2-220ENST00000608988 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.15■■□□□ 1.94
SHANK2-220ENST00000608988 STAP2Q9UGK3 403 aa27.15■■□□□ 1.94
SHANK2-220ENST00000608988 TTC21BQ7Z4L5 1316 aa27.15■■□□□ 1.94
SHANK2-220ENST00000608988 SLC4A2P04920 1241 aa27.15■■□□□ 1.94
SHANK2-220ENST00000608988 NALCNQ8IZF0 1738 aa27.14■■□□□ 1.94
SHANK2-220ENST00000608988 APBB1O00213 710 aa27.13■■□□□ 1.93
SHANK2-220ENST00000608988 LRRCC1Q9C099 1032 aa27.13■■□□□ 1.93
SHANK2-220ENST00000608988 WDR33Q9C0J8 1336 aaKnown RBP27.13■■□□□ 1.93
SHANK2-220ENST00000608988 GNAI3P08754 354 aa27.13■■□□□ 1.93
SHANK2-220ENST00000608988 TMEM87AQ8NBN3 555 aa27.13■■□□□ 1.93
SHANK2-220ENST00000608988 NSFL1CQ9UNZ2 370 aaKnown RBP27.13■■□□□ 1.93
SHANK2-220ENST00000608988 N4BP2Q86UW6 1770 aaPredicted RBP27.12■■□□□ 1.93
SHANK2-220ENST00000608988 LETM1O95202 739 aaPredicted RBP27.12■■□□□ 1.93
SHANK2-220ENST00000608988 MX1P20591 662 aa27.12■■□□□ 1.93
SHANK2-220ENST00000608988 KIAA2012Q0VF49 1180 aa27.12■■□□□ 1.93
SHANK2-220ENST00000608988 KRT24Q2M2I5 525 aa27.12■■□□□ 1.93
SHANK2-220ENST00000608988 OVOS2A0A0J9YW53 1432 aa27.12■■□□□ 1.93
SHANK2-220ENST00000608988 OVOS2Q6IE36 1432 aa27.12■■□□□ 1.93
SHANK2-220ENST00000608988 CHMLP26374 656 aa27.11■■□□□ 1.93
SHANK2-220ENST00000608988 SOS1Q07889 1333 aaPredicted RBP27.11■■□□□ 1.93
SHANK2-220ENST00000608988 AEBP1Q8IUX7 1158 aa27.1■■□□□ 1.93
SHANK2-220ENST00000608988 PLEKHG5O94827 1062 aa27.1■■□□□ 1.93
SHANK2-220ENST00000608988 MCM10Q7L590 875 aa27.1■■□□□ 1.93
SHANK2-220ENST00000608988 PTMAP06454 111 aaKnown RBP27.08■■□□□ 1.93
SHANK2-220ENST00000608988 ATP8B2P98198 1209 aa27.08■■□□□ 1.93
SHANK2-220ENST00000608988 PXDNLA1KZ92 1463 aa27.07■■□□□ 1.92
SHANK2-220ENST00000608988 USP31Q70CQ4 1352 aa27.07■■□□□ 1.92
SHANK2-220ENST00000608988 TOPAZ1Q8N9V7 1692 aa27.07■■□□□ 1.92
SHANK2-220ENST00000608988 FAM13BQ9NYF5 915 aa27.06■■□□□ 1.92
SHANK2-220ENST00000608988 TSPOAP1O95153 1857 aa27.06■■□□□ 1.92
SHANK2-220ENST00000608988 METP08581 1390 aa27.05■■□□□ 1.92
SHANK2-220ENST00000608988 RBM10P98175 930 aaKnown RBP27.05■■□□□ 1.92
SHANK2-220ENST00000608988 XRN1Q8IZH2 1706 aaKnown RBP27.05■■□□□ 1.92
SHANK2-220ENST00000608988 PEAK1Q9H792 1746 aa27.05■■□□□ 1.92
SHANK2-220ENST00000608988 ANO2Q9NQ90 1003 aa27.05■■□□□ 1.92
SHANK2-220ENST00000608988 PRIMPOLQ96LW4 560 aa27.04■■□□□ 1.92
SHANK2-220ENST00000608988 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
SHANK2-220ENST00000608988 CCDC183Q5T5S1 534 aa27.04■■□□□ 1.92
SHANK2-220ENST00000608988 PALD1Q9ULE6 856 aa27.04■■□□□ 1.92
SHANK2-220ENST00000608988 FAM208AQ9UK61 1670 aaKnown RBP27.03■■□□□ 1.92
SHANK2-220ENST00000608988 HTATSF1O43719 755 aaKnown RBP27.03■■□□□ 1.92
SHANK2-220ENST00000608988 TSPYL4Q9UJ04 414 aa27.03■■□□□ 1.92
SHANK2-220ENST00000608988 CACNA1FO60840 1977 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 LRRC37A3O60309 1634 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 HMGN5P82970 282 aaKnown RBP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 SLC4A10Q6U841 1118 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 RNF214Q8ND24 703 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 RTF1Q92541 710 aaKnown RBP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 EXOC6BQ9Y2D4 811 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 HSPA4P34932 840 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 FOXD4L5Q5VV16 416 aaPredicted RBP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 G2E3Q7L622 706 aa27.02■■□□□ 1.92
SHANK2-220ENST00000608988 FOXD4L4Q8WXT5 416 aaPredicted RBP27.02■■□□□ 1.92
SHANK2-220ENST00000608988 RPAP1Q9BWH6 1393 aaPredicted RBP27.01■■□□□ 1.91
SHANK2-220ENST00000608988 FMN2Q9NZ56 1722 aa27.01■■□□□ 1.91
SHANK2-220ENST00000608988 USP48Q86UV5 1035 aa27■■□□□ 1.91
SHANK2-220ENST00000608988 MYRIPQ8NFW9 859 aa27■■□□□ 1.91
SHANK2-220ENST00000608988 CHAMP1Q96JM3 812 aa27■■□□□ 1.91
SHANK2-220ENST00000608988 PIBF1Q8WXW3 757 aa27■■□□□ 1.91
SHANK2-220ENST00000608988 KDRP35968 1356 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 PRR36Q9H6K5 1346 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 PLEKHG3A1L390 1219 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 TRIM6-TRIM34B2RNG4 842 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 RAB11FIP3O75154 756 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 CCDC30Q5VVM6 783 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 TXNDC2Q86VQ3 553 aa26.99■■□□□ 1.91
SHANK2-220ENST00000608988 F6X3S4 739 aa26.98■■□□□ 1.91
SHANK2-220ENST00000608988 RILPL2Q969X0 211 aa26.98■■□□□ 1.91
SHANK2-220ENST00000608988 ATP6V1DQ9Y5K8 247 aa26.98■■□□□ 1.91
SHANK2-220ENST00000608988 SMAP1Q8IYB5 467 aaPredicted RBP26.98■■□□□ 1.91
SHANK2-220ENST00000608988 USP6P35125 1406 aa26.97■■□□□ 1.91
SHANK2-220ENST00000608988 BABAM1Q9NWV8 329 aa26.97■■□□□ 1.91
SHANK2-220ENST00000608988 GTF2F1P35269 517 aaKnown RBP eCLIP26.96■■□□□ 1.915e-7■■■■■ 28.2
SHANK2-220ENST00000608988 UBE2HP62256 183 aa26.96■■□□□ 1.91
SHANK2-220ENST00000608988 FLIIQ13045 1269 aa26.96■■□□□ 1.91
SHANK2-220ENST00000608988 TPM3P06753 285 aa26.95■■□□□ 1.9
SHANK2-220ENST00000608988 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.95■■□□□ 1.9
SHANK2-220ENST00000608988 RAD50Q92878 1312 aa26.95■■□□□ 1.9
SHANK2-220ENST00000608988 GADD45BO75293 160 aaPredicted RBP26.94■■□□□ 1.9
SHANK2-220ENST00000608988 ZSCAN22P10073 491 aaPredicted RBP26.94■■□□□ 1.9
SHANK2-220ENST00000608988 NCKAP5LQ9HCH0 1330 aa26.94■■□□□ 1.9
SHANK2-220ENST00000608988 SPTLC3Q9NUV7 552 aa26.93■■□□□ 1.9
SHANK2-220ENST00000608988 SBNO1A3KN83 1393 aa26.93■■□□□ 1.9
SHANK2-220ENST00000608988 PNMA6EA0A0J9YXQ4 647 aa26.93■■□□□ 1.9
SHANK2-220ENST00000608988 MTHFSDQ2M296 383 aaKnown RBP26.93■■□□□ 1.9
SHANK2-220ENST00000608988 HSP90AB2PQ58FF8 381 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms