RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 TSPY26PQ9H489 355 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 IFT57Q9NWB7 429 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 CCDC61Q9Y6R9 512 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 RICTORQ6R327 1708 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 GUCY1B3Q02153 619 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 ABTB2Q8N961 1025 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 SYTL4Q96C24 671 aaPredicted RBP7.82□□□□□ -1.16
RPF2-204ENST00000607388 CHMP4CQ96CF2 233 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 JAKMIP1Q96N16 626 aaKnown RBP7.82□□□□□ -1.16
RPF2-204ENST00000607388 DCTPP1Q9H773 170 aa7.82□□□□□ -1.16
RPF2-204ENST00000607388 AAMPQ13685 434 aa7.81□□□□□ -1.16
RPF2-204ENST00000607388 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
RPF2-204ENST00000607388 ERCC4Q92889 916 aaPredicted RBP7.81□□□□□ -1.16
RPF2-204ENST00000607388 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.81□□□□□ -1.16
RPF2-204ENST00000607388 V9GYY5 206 aaPredicted RBP7.81□□□□□ -1.16
RPF2-204ENST00000607388 TEFQ10587 303 aa7.81□□□□□ -1.16
RPF2-204ENST00000607388 FLIIQ13045 1269 aa7.81□□□□□ -1.16
RPF2-204ENST00000607388 ANKRD44Q8N8A2 993 aa7.81□□□□□ -1.16
RPF2-204ENST00000607388 BOLA2Q9H3K6 86 aa7.81□□□□□ -1.16
RPF2-204ENST00000607388 CIZ1Q9ULV3 898 aaPredicted RBP7.81□□□□□ -1.16
RPF2-204ENST00000607388 WASLO00401 505 aaPredicted RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 BICD2Q8TD16 824 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 SNX21Q969T3 373 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 MAST1Q9Y2H9 1570 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 CT47B1P0C2W7 299 aaPredicted RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 IL13P35225 146 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 PPP1R42Q7Z4L9 355 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 NPATQ14207 1427 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 IFIT2P09913 472 aaKnown RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 SETD1BQ9UPS6 1966 aaKnown RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 POLR1AO95602 1720 aaPredicted RBP7.8□□□□□ -1.16
RPF2-204ENST00000607388 KAT6BQ8WYB5 2073 aa7.8□□□□□ -1.16
RPF2-204ENST00000607388 ABCC11Q96J66 1382 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 ACEP12821 1306 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 PI4KAP2A4QPH2 592 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
RPF2-204ENST00000607388 ADCY5O95622 1261 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 RPAP2Q8IXW5 612 aaPredicted RBP7.79□□□□□ -1.16
RPF2-204ENST00000607388 PI4KAP1Q8N8J0 262 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 SYAP1Q96A49 352 aaPredicted RBP7.79□□□□□ -1.16
RPF2-204ENST00000607388 IL25Q9H293 177 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 KCNQ3O43525 872 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 ISM2Q6H9L7 571 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 PHF23Q9BUL5 403 aaPredicted RBP7.79□□□□□ -1.16
RPF2-204ENST00000607388 ZDHHC9Q9Y397 364 aa7.79□□□□□ -1.16
RPF2-204ENST00000607388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.79□□□□□ -1.16
RPF2-204ENST00000607388 NBPF7P0C2Y1 421 aaPredicted RBP7.78□□□□□ -1.16
RPF2-204ENST00000607388 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
RPF2-204ENST00000607388 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
RPF2-204ENST00000607388 NEUROD6Q96NK8 337 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 ESYT1Q9BSJ8 1104 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 TNRQ92752 1358 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 INO80Q9ULG1 1556 aaPredicted RBP7.78□□□□□ -1.16
RPF2-204ENST00000607388 FILIP1Q7Z7B0 1213 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 C16orf45Q96MC5 204 aaPredicted RBP7.78□□□□□ -1.16
RPF2-204ENST00000607388 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 ARHGEF40Q8TER5 1519 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 CLTCL1P53675 1640 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 CHST3Q7LGC8 479 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 AACSQ86V21 672 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 FSD1Q9BTV5 496 aa7.78□□□□□ -1.16
RPF2-204ENST00000607388 CSB-PGBD3P0DP91 1061 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 LARP1BQ659C4 914 aaKnown RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 CREBRFQ8IUR6 639 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 SIGLEC1Q9BZZ2 1709 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 SLC52A1Q9NWF4 448 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 TRMT1Q9NXH9 659 aaKnown RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 NPC1L1Q9UHC9 1359 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 H3BQV1 296 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 LTKP29376 864 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 CHAF1AQ13111 956 aaPredicted RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 SLC39A6Q13433 755 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 LRSAM1Q6UWE0 723 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 RASEFQ8IZ41 740 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 EID1Q9Y6B2 187 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 EIF2AK4Q9P2K8 1649 aaKnown RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 CHGBP05060 677 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 AK2P54819 239 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 ZC3H6P61129 1189 aaKnown RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 HSP90AA4PQ58FG1 418 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 CCDC30Q5VVM6 783 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
RPF2-204ENST00000607388 EYA1Q99502 592 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 SRCIN1Q9C0H9 1055 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 CHPF2Q9P2E5 772 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 NLRP1Q9C000 1473 aa7.77□□□□□ -1.17
RPF2-204ENST00000607388 CHMLP26374 656 aa7.76□□□□□ -1.17
RPF2-204ENST00000607388 GJB2P29033 226 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms