RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
LINC00397-202ENST00000606785 HINFPQ9BQA5 517 aa8.35□□□□□ -1.07
LINC00397-202ENST00000606785 H3BRB1 525 aa8.34□□□□□ -1.07
LINC00397-202ENST00000606785 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
LINC00397-202ENST00000606785 ICMTO60725 284 aa8.34□□□□□ -1.07
LINC00397-202ENST00000606785 TUT1Q9H6E5 874 aaKnown RBP8.34□□□□□ -1.07
LINC00397-202ENST00000606785 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
LINC00397-202ENST00000606785 WEE1P30291 646 aa8.33□□□□□ -1.08
LINC00397-202ENST00000606785 ZNF211Q13398 564 aaPredicted RBP8.33□□□□□ -1.08
LINC00397-202ENST00000606785 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
LINC00397-202ENST00000606785 ANKRD33BA6NCL7 494 aa8.32□□□□□ -1.08
LINC00397-202ENST00000606785 LGR5O75473 907 aa8.32□□□□□ -1.08
LINC00397-202ENST00000606785 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
LINC00397-202ENST00000606785 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
LINC00397-202ENST00000606785 GLYCTKQ8IVS8 523 aa8.32□□□□□ -1.08
LINC00397-202ENST00000606785 TSEN2Q8NCE0 465 aaKnown RBP8.32□□□□□ -1.08
LINC00397-202ENST00000606785 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
LINC00397-202ENST00000606785 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
LINC00397-202ENST00000606785 C21orf2O43822 256 aa8.31□□□□□ -1.08
LINC00397-202ENST00000606785 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
LINC00397-202ENST00000606785 MRRFQ96E11 262 aaKnown RBP8.31□□□□□ -1.08
LINC00397-202ENST00000606785 ANO2Q9NQ90 1003 aa8.31□□□□□ -1.08
LINC00397-202ENST00000606785 IGSF5Q9NSI5 407 aa8.31□□□□□ -1.08
LINC00397-202ENST00000606785 KIAA1522Q9P206 1035 aaPredicted RBP8.31□□□□□ -1.08
LINC00397-202ENST00000606785 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
LINC00397-202ENST00000606785 RAB15P59190 212 aa8.3□□□□□ -1.08
LINC00397-202ENST00000606785 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
LINC00397-202ENST00000606785 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
LINC00397-202ENST00000606785 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
LINC00397-202ENST00000606785 SEPT3Q9UH03 358 aa8.3□□□□□ -1.08
LINC00397-202ENST00000606785 MAP4K5Q9Y4K4 846 aa8.3□□□□□ -1.08
LINC00397-202ENST00000606785 IGSF3O75054 1194 aa8.29□□□□□ -1.08
LINC00397-202ENST00000606785 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC00397-202ENST00000606785 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
LINC00397-202ENST00000606785 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC00397-202ENST00000606785 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
LINC00397-202ENST00000606785 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
LINC00397-202ENST00000606785 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
LINC00397-202ENST00000606785 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
LINC00397-202ENST00000606785 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
LINC00397-202ENST00000606785 VARSP26640 1264 aaKnown RBP8.28□□□□□ -1.08
LINC00397-202ENST00000606785 SCTRP47872 440 aa8.28□□□□□ -1.08
LINC00397-202ENST00000606785 ECM1Q16610 540 aa8.28□□□□□ -1.08
LINC00397-202ENST00000606785 ZSCAN1Q8NBB4 408 aa8.28□□□□□ -1.08
LINC00397-202ENST00000606785 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
LINC00397-202ENST00000606785 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 J3QL48 77 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 IGFBP4P22692 258 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
LINC00397-202ENST00000606785 MAPK1P28482 360 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 TRIM32Q13049 653 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
LINC00397-202ENST00000606785 NPAS3Q8IXF0 933 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
LINC00397-202ENST00000606785 ESF1Q9H501 851 aaKnown RBP8.27□□□□□ -1.09
LINC00397-202ENST00000606785 FOXO3O43524 673 aa8.26□□□□□ -1.09
LINC00397-202ENST00000606785 WNT7BP56706 349 aa8.26□□□□□ -1.09
LINC00397-202ENST00000606785 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
LINC00397-202ENST00000606785 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
LINC00397-202ENST00000606785 HPS1Q92902 700 aa8.26□□□□□ -1.09
LINC00397-202ENST00000606785 ASB16Q96NS5 453 aa8.26□□□□□ -1.09
LINC00397-202ENST00000606785 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
LINC00397-202ENST00000606785 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
LINC00397-202ENST00000606785 WASLO00401 505 aaPredicted RBP8.25□□□□□ -1.09
LINC00397-202ENST00000606785 GMPRP36959 345 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 MTMR3Q13615 1198 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 HELQQ8TDG4 1101 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 IRF7Q92985 503 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
LINC00397-202ENST00000606785 BACH1O14867 736 aa8.24□□□□□ -1.09
LINC00397-202ENST00000606785 SCNN1DP51172 638 aa8.24□□□□□ -1.09
LINC00397-202ENST00000606785 SKOR1P84550 965 aa8.24□□□□□ -1.09
LINC00397-202ENST00000606785 FBXO33Q7Z6M2 555 aa8.24□□□□□ -1.09
LINC00397-202ENST00000606785 ZSCAN29Q8IWY8 852 aaPredicted RBP8.24□□□□□ -1.09
LINC00397-202ENST00000606785 OSBPL3Q9H4L5 887 aa8.24□□□□□ -1.09
LINC00397-202ENST00000606785 GDF10P55107 478 aa8.23□□□□□ -1.09
LINC00397-202ENST00000606785 NAA30Q147X3 362 aaPredicted RBP8.23□□□□□ -1.09
LINC00397-202ENST00000606785 SCG3Q8WXD2 468 aaKnown RBP8.23□□□□□ -1.09
LINC00397-202ENST00000606785 NPR3P17342 541 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
LINC00397-202ENST00000606785 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 CDK15Q96Q40 435 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
LINC00397-202ENST00000606785 FAM13AO94988 1023 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 INHAP05111 366 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 VAMP1P23763 118 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 EPHA4P54764 986 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 RGL4Q8IZJ4 473 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 CYLDQ9NQC7 956 aa8.21□□□□□ -1.1
LINC00397-202ENST00000606785 STAU1O95793 577 aaKnown RBP8.2□□□□□ -1.1
LINC00397-202ENST00000606785 FSHRP23945 695 aa8.2□□□□□ -1.1
LINC00397-202ENST00000606785 ARID5BQ14865 1188 aa8.2□□□□□ -1.1
LINC00397-202ENST00000606785 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
LINC00397-202ENST00000606785 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms