RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 SLC52A2Q9HAB3 445 aa30.53■■■□□ 2.48
SNX5-217ENST00000606557 SMARCC1Q92922 1105 aaPredicted RBP30.52■■■□□ 2.48
SNX5-217ENST00000606557 ASAP1Q9ULH1 1129 aa30.52■■■□□ 2.48
SNX5-217ENST00000606557 ZNF831Q5JPB2 1677 aa30.52■■■□□ 2.48
SNX5-217ENST00000606557 PNISRQ8TF01 805 aaKnown RBP30.51■■■□□ 2.47
SNX5-217ENST00000606557 RUNDC1Q96C34 613 aa30.51■■■□□ 2.47
SNX5-217ENST00000606557 DIEXFQ68CQ4 756 aaKnown RBP30.5■■■□□ 2.47
SNX5-217ENST00000606557 ATG3Q9NT62 314 aa30.5■■■□□ 2.47
SNX5-217ENST00000606557 UBR2Q8IWV8 1755 aa30.5■■■□□ 2.47
SNX5-217ENST00000606557 HTATSF1O43719 755 aaKnown RBP30.49■■■□□ 2.47
SNX5-217ENST00000606557 SLC27A3Q5K4L6 730 aa30.49■■■□□ 2.47
SNX5-217ENST00000606557 LRRC4BQ9NT99 713 aa30.49■■■□□ 2.47
SNX5-217ENST00000606557 RTF1Q92541 710 aaKnown RBP30.48■■■□□ 2.47
SNX5-217ENST00000606557 MCM10Q7L590 875 aa30.46■■■□□ 2.47
SNX5-217ENST00000606557 CCNL1Q9UK58 526 aaPredicted RBP30.46■■■□□ 2.47
SNX5-217ENST00000606557 CICQ96RK0 1608 aaPredicted RBP30.45■■■□□ 2.47
SNX5-217ENST00000606557 TMPOP42166 694 aaKnown RBP30.45■■■□□ 2.47
SNX5-217ENST00000606557 TEFQ10587 303 aa30.45■■■□□ 2.47
SNX5-217ENST00000606557 TUBGCP6Q96RT7 1819 aa30.45■■■□□ 2.46
SNX5-217ENST00000606557 KCNQ4P56696 695 aa30.44■■■□□ 2.46
SNX5-217ENST00000606557 DCTN1Q14203 1278 aa30.44■■■□□ 2.46
SNX5-217ENST00000606557 COL5A3P25940 1745 aaPredicted RBP30.44■■■□□ 2.46
SNX5-217ENST00000606557 ANO8Q9HCE9 1232 aaPredicted RBP30.43■■■□□ 2.46
SNX5-217ENST00000606557 KCPQ6ZWJ8 1503 aa30.42■■■□□ 2.46
SNX5-217ENST00000606557 TJP1Q07157 1748 aa30.42■■■□□ 2.46
SNX5-217ENST00000606557 QSER1Q2KHR3 1735 aa30.42■■■□□ 2.46
SNX5-217ENST00000606557 LOC102724428A0A0B4J2F2 783 aa30.41■■■□□ 2.46
SNX5-217ENST00000606557 SIK1P57059 783 aa30.41■■■□□ 2.46
SNX5-217ENST00000606557 RIPK4P57078 832 aa30.41■■■□□ 2.46
SNX5-217ENST00000606557 NBPF14Q5TI25 921 aa30.41■■■□□ 2.46
SNX5-217ENST00000606557 RRP7AQ9Y3A4 280 aaKnown RBP30.41■■■□□ 2.46
SNX5-217ENST00000606557 C4BP0C0L5 1744 aa30.41■■■□□ 2.46
SNX5-217ENST00000606557 KDM3BQ7LBC6 1761 aa30.4■■■□□ 2.46
SNX5-217ENST00000606557 SLC39A6Q13433 755 aa30.38■■■□□ 2.45
SNX5-217ENST00000606557 SLC4A9Q96Q91 983 aa30.37■■■□□ 2.45
SNX5-217ENST00000606557 CCER2I3L3R5 266 aa30.36■■■□□ 2.45
SNX5-217ENST00000606557 LMOD3Q0VAK6 560 aa30.36■■■□□ 2.45
SNX5-217ENST00000606557 R3HDM1Q15032 1099 aaKnown RBP30.36■■■□□ 2.45
SNX5-217ENST00000606557 NEUROD2Q15784 382 aa30.36■■■□□ 2.45
SNX5-217ENST00000606557 RBM42Q9BTD8 480 aaKnown RBP30.36■■■□□ 2.45
SNX5-217ENST00000606557 CASZ1Q86V15 1759 aa30.36■■■□□ 2.45
SNX5-217ENST00000606557 PSDA5PKW4 1024 aaPredicted RBP30.35■■■□□ 2.45
SNX5-217ENST00000606557 APAF1O14727 1248 aa30.35■■■□□ 2.45
SNX5-217ENST00000606557 PTCD1O75127 700 aaKnown RBP30.35■■■□□ 2.45
SNX5-217ENST00000606557 ATP6V1AP38606 617 aa30.35■■■□□ 2.45
SNX5-217ENST00000606557 ZNF827Q17R98 1081 aa30.35■■■□□ 2.45
SNX5-217ENST00000606557 THUMPD2Q9BTF0 503 aaKnown RBP30.35■■■□□ 2.45
SNX5-217ENST00000606557 STK32BQ9NY57 414 aa30.35■■■□□ 2.45
SNX5-217ENST00000606557 UBR3Q6ZT12 1888 aa30.35■■■□□ 2.45
SNX5-217ENST00000606557 ITPK1Q13572 414 aa30.34■■■□□ 2.45
SNX5-217ENST00000606557 SLC15A2Q16348 729 aa30.34■■■□□ 2.45
SNX5-217ENST00000606557 AKT1S1Q96B36 256 aa30.34■■■□□ 2.45
SNX5-217ENST00000606557 TRIM35Q9UPQ4 493 aa30.33■■■□□ 2.45
SNX5-217ENST00000606557 BTBD11A6QL63 1104 aa30.32■■■□□ 2.44
SNX5-217ENST00000606557 ZNF790Q6PG37 636 aa30.32■■■□□ 2.44
SNX5-217ENST00000606557 FAM9BQ8IZU0 186 aa30.32■■■□□ 2.44
SNX5-217ENST00000606557 MYH14Q7Z406 1995 aaKnown RBP30.32■■■□□ 2.44
SNX5-217ENST00000606557 TAF7Q15545 349 aaPredicted RBP30.31■■■□□ 2.44
SNX5-217ENST00000606557 TTC5Q8N0Z6 440 aa30.31■■■□□ 2.44
SNX5-217ENST00000606557 LINC00116Q8NCU8 138 aa30.31■■■□□ 2.44
SNX5-217ENST00000606557 HMGB2P26583 209 aaKnown RBP30.3■■■□□ 2.44
SNX5-217ENST00000606557 MIER1Q8N108 512 aa30.3■■■□□ 2.44
SNX5-217ENST00000606557 KCNQ3O43525 872 aa30.27■■■□□ 2.44
SNX5-217ENST00000606557 ZNF496Q96IT1 587 aaPredicted RBP30.26■■■□□ 2.43
SNX5-217ENST00000606557 HEG1Q9ULI3 1381 aa30.25■■■□□ 2.43
SNX5-217ENST00000606557 VSIG10Q8N0Z9 540 aa30.24■■■□□ 2.43
SNX5-217ENST00000606557 MIS18AQ9NYP9 233 aa30.24■■■□□ 2.43
SNX5-217ENST00000606557 LAMB4A4D0S4 1761 aa30.23■■■□□ 2.43
SNX5-217ENST00000606557 FMNL2Q96PY5 1086 aa30.23■■■□□ 2.43
SNX5-217ENST00000606557 TFCP2L1Q9NZI6 479 aa30.23■■■□□ 2.43
SNX5-217ENST00000606557 DNAJC10Q8IXB1 793 aa30.22■■■□□ 2.43
SNX5-217ENST00000606557 AK7Q96M32 723 aa30.22■■■□□ 2.43
SNX5-217ENST00000606557 PNPLA7Q6ZV29 1317 aa30.22■■■□□ 2.43
SNX5-217ENST00000606557 CNTNAP4Q9C0A0 1308 aa30.22■■■□□ 2.43
SNX5-217ENST00000606557 SENP3-EIF4A1A0A087X0R7 540 aa30.2■■■□□ 2.43
SNX5-217ENST00000606557 PDGFDQ9GZP0 370 aaPredicted RBP30.2■■■□□ 2.43
SNX5-217ENST00000606557 CCDC27Q2M243 656 aa30.18■■■□□ 2.42
SNX5-217ENST00000606557 NCBP3Q53F19 620 aaKnown RBP30.18■■■□□ 2.42
SNX5-217ENST00000606557 RC3H1Q5TC82 1133 aaKnown RBP30.18■■■□□ 2.42
SNX5-217ENST00000606557 BABAM1Q9NWV8 329 aa30.18■■■□□ 2.42
SNX5-217ENST00000606557 C4AP0C0L4 1744 aa30.18■■■□□ 2.42
SNX5-217ENST00000606557 CRKLP46109 303 aaKnown RBP30.17■■■□□ 2.42
SNX5-217ENST00000606557 AMIGO3Q86WK7 504 aa30.17■■■□□ 2.42
SNX5-217ENST00000606557 TSPYL4Q9UJ04 414 aa30.17■■■□□ 2.42
SNX5-217ENST00000606557 LRP5O75197 1615 aa30.16■■■□□ 2.42
SNX5-217ENST00000606557 GNPATO15228 680 aa30.16■■■□□ 2.42
SNX5-217ENST00000606557 CYP19A1P11511 503 aaPredicted RBP30.16■■■□□ 2.42
SNX5-217ENST00000606557 COL24A1Q17RW2 1714 aa30.15■■■□□ 2.42
SNX5-217ENST00000606557 CHL1O00533 1208 aa30.13■■■□□ 2.41
SNX5-217ENST00000606557 SSFA2P28290 1259 aa30.13■■■□□ 2.41
SNX5-217ENST00000606557 EIF4A1P60842 406 aaKnown RBP30.13■■■□□ 2.41
SNX5-217ENST00000606557 INTS5Q6P9B9 1019 aaKnown RBP30.13■■■□□ 2.41
SNX5-217ENST00000606557 WWC1Q8IX03 1113 aa30.13■■■□□ 2.41
SNX5-217ENST00000606557 TEX13AQ9BXU3 409 aaPredicted RBP30.13■■■□□ 2.41
SNX5-217ENST00000606557 SNRPA1P09661 255 aaKnown RBP30.12■■■□□ 2.41
SNX5-217ENST00000606557 CALD1Q05682 793 aaKnown RBP30.12■■■□□ 2.41
SNX5-217ENST00000606557 COL23A1Q86Y22 540 aaPredicted RBP30.12■■■□□ 2.41
SNX5-217ENST00000606557 FLAD1Q8NFF5 587 aa30.12■■■□□ 2.41
SNX5-217ENST00000606557 CCDC87Q9NVE4 849 aa30.12■■■□□ 2.41
SNX5-217ENST00000606557 PRAMEF22A3QJZ6 481 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms