RNA–Protein interactions for RNA: ENST00000603840.5

ZSWIM8-218, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 970 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-218ENST00000603840 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
ZSWIM8-218ENST00000603840 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
ZSWIM8-218ENST00000603840 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
ZSWIM8-218ENST00000603840 C5P01031 1676 aa13.39□□□□□ -0.27
ZSWIM8-218ENST00000603840 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
ZSWIM8-218ENST00000603840 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
ZSWIM8-218ENST00000603840 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
ZSWIM8-218ENST00000603840 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
ZSWIM8-218ENST00000603840 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
ZSWIM8-218ENST00000603840 DNAJC5GQ8N7S2 189 aa13.37□□□□□ -0.27
ZSWIM8-218ENST00000603840 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
ZSWIM8-218ENST00000603840 PIGBQ92521 554 aa13.36□□□□□ -0.27
ZSWIM8-218ENST00000603840 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
ZSWIM8-218ENST00000603840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 PHF14O94880 888 aa13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 LINC00116Q8NCU8 138 aa13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
ZSWIM8-218ENST00000603840 NPC1L1Q9UHC9 1359 aa13.33□□□□□ -0.27
ZSWIM8-218ENST00000603840 IL13P35225 146 aa13.33□□□□□ -0.28
ZSWIM8-218ENST00000603840 MTHFSP49914 203 aa13.33□□□□□ -0.28
ZSWIM8-218ENST00000603840 ITPK1Q13572 414 aa13.33□□□□□ -0.28
ZSWIM8-218ENST00000603840 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
ZSWIM8-218ENST00000603840 SPG7Q9UQ90 795 aa13.33□□□□□ -0.28
ZSWIM8-218ENST00000603840 ITGB4P16144 1822 aa13.32□□□□□ -0.28
ZSWIM8-218ENST00000603840 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
ZSWIM8-218ENST00000603840 AK7Q96M32 723 aa13.32□□□□□ -0.28
ZSWIM8-218ENST00000603840 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 SSFA2P28290 1259 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 SIK1P57059 783 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 PCNTO95613 3336 aa13.31□□□□□ -0.28
ZSWIM8-218ENST00000603840 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
ZSWIM8-218ENST00000603840 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM8-218ENST00000603840 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM8-218ENST00000603840 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
ZSWIM8-218ENST00000603840 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
ZSWIM8-218ENST00000603840 MMP10P09238 476 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 PHKG2P15735 406 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 NMRK2Q9NPI5 230 aa13.29□□□□□ -0.28
ZSWIM8-218ENST00000603840 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 APLP1P51693 650 aa13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 HTRA3P83110 453 aa13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
ZSWIM8-218ENST00000603840 GNPATO15228 680 aa13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 TOMM70O94826 608 aa13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 KDRP35968 1356 aa13.27□□□□□ -0.29
ZSWIM8-218ENST00000603840 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
ZSWIM8-218ENST00000603840 KCNA3P22001 575 aa13.26□□□□□ -0.29
ZSWIM8-218ENST00000603840 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
ZSWIM8-218ENST00000603840 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
ZSWIM8-218ENST00000603840 KIF13BQ9NQT8 1826 aa13.26□□□□□ -0.29
ZSWIM8-218ENST00000603840 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
ZSWIM8-218ENST00000603840 DPEP1P16444 411 aa13.25□□□□□ -0.29
ZSWIM8-218ENST00000603840 COL13A1Q5TAT6 717 aaPredicted RBP13.25□□□□□ -0.29
ZSWIM8-218ENST00000603840 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
ZSWIM8-218ENST00000603840 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
ZSWIM8-218ENST00000603840 TGFB2P61812 414 aa13.24□□□□□ -0.29
ZSWIM8-218ENST00000603840 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 HMOX1P09601 288 aa13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
ZSWIM8-218ENST00000603840 ABCB7O75027 752 aa13.22□□□□□ -0.29
ZSWIM8-218ENST00000603840 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
ZSWIM8-218ENST00000603840 GYS1P13807 737 aa13.22□□□□□ -0.29
ZSWIM8-218ENST00000603840 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
ZSWIM8-218ENST00000603840 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
ZSWIM8-218ENST00000603840 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
ZSWIM8-218ENST00000603840 JMYQ8N9B5 988 aa13.21□□□□□ -0.29
ZSWIM8-218ENST00000603840 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.3
ZSWIM8-218ENST00000603840 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.3
ZSWIM8-218ENST00000603840 FCHSD2O94868 740 aa13.2□□□□□ -0.3
ZSWIM8-218ENST00000603840 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
ZSWIM8-218ENST00000603840 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-218ENST00000603840 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
ZSWIM8-218ENST00000603840 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-218ENST00000603840 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 AKAP4Q5JQC9 854 aa13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
ZSWIM8-218ENST00000603840 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms