RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
SNRNP70-209ENST00000601065 ERVV-2B6SEH9 535 aa28.6■■■□□ 2.17
SNRNP70-209ENST00000601065 RGS17Q9UGC6 210 aaPredicted RBP28.6■■■□□ 2.17
SNRNP70-209ENST00000601065 RBM6P78332 1123 aaKnown RBP28.6■■■□□ 2.17
SNRNP70-209ENST00000601065 NFATC2IPQ8NCF5 419 aa28.6■■■□□ 2.17
SNRNP70-209ENST00000601065 KDM3BQ7LBC6 1761 aa28.58■■■□□ 2.17
SNRNP70-209ENST00000601065 BTBD11A6QL63 1104 aa28.58■■■□□ 2.17
SNRNP70-209ENST00000601065 EXOSC9Q06265 439 aaKnown RBP28.58■■■□□ 2.17
SNRNP70-209ENST00000601065 SEPT12Q8IYM1 358 aa28.58■■■□□ 2.17
SNRNP70-209ENST00000601065 CABP4P57796 275 aa28.57■■■□□ 2.16
SNRNP70-209ENST00000601065 SUPT16HQ9Y5B9 1047 aaKnown RBP28.57■■■□□ 2.16
SNRNP70-209ENST00000601065 DOT1LQ8TEK3 1739 aa28.54■■■□□ 2.16
SNRNP70-209ENST00000601065 ITGB4P16144 1822 aa28.53■■■□□ 2.16
SNRNP70-209ENST00000601065 RCAN3Q9UKA8 241 aa28.52■■■□□ 2.16
SNRNP70-209ENST00000601065 CT47B1P0C2W7 299 aaPredicted RBP28.51■■■□□ 2.15
SNRNP70-209ENST00000601065 RXRBP28702 533 aa28.51■■■□□ 2.15
SNRNP70-209ENST00000601065 C8orf58Q8NAV2 365 aa28.51■■■□□ 2.15
SNRNP70-209ENST00000601065 KCNQ3O43525 872 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 KRT24Q2M2I5 525 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 POTEAQ6S8J7 498 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 TSPYL6Q8N831 410 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 TMOD3Q9NYL9 352 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 GTF3C3Q9Y5Q9 886 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 ZNF790Q6PG37 636 aa28.5■■■□□ 2.15
SNRNP70-209ENST00000601065 KAT6BQ8WYB5 2073 aa28.49■■■□□ 2.15
SNRNP70-209ENST00000601065 BRWD3Q6RI45 1802 aa28.49■■■□□ 2.15
SNRNP70-209ENST00000601065 SLC39A6Q13433 755 aa28.49■■■□□ 2.15
SNRNP70-209ENST00000601065 EIF4A1P60842 406 aaKnown RBP28.48■■■□□ 2.15
SNRNP70-209ENST00000601065 ELL2O00472 640 aaPredicted RBP28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 TWISTNBQ3B726 338 aaPredicted RBP28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 BCL9O00512 1426 aa28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 PAPPAQ13219 1627 aa28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 PRIM1P49642 420 aaKnown RBP28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 PIGBQ92521 554 aa28.47■■■□□ 2.15
SNRNP70-209ENST00000601065 VAMP4O75379 141 aa28.46■■■□□ 2.15
SNRNP70-209ENST00000601065 SYTL4Q96C24 671 aaPredicted RBP28.45■■■□□ 2.15
SNRNP70-209ENST00000601065 ACSBG1Q96GR2 724 aa28.45■■■□□ 2.15
SNRNP70-209ENST00000601065 FAM182BQ5T319 152 aa28.44■■■□□ 2.14
SNRNP70-209ENST00000601065 TTC5Q8N0Z6 440 aa28.44■■■□□ 2.14
SNRNP70-209ENST00000601065 KRT27Q7Z3Y8 459 aa28.43■■■□□ 2.14
SNRNP70-209ENST00000601065 HEG1Q9ULI3 1381 aa28.43■■■□□ 2.14
SNRNP70-209ENST00000601065 UBR2Q8IWV8 1755 aa28.42■■■□□ 2.14
SNRNP70-209ENST00000601065 RARSP54136 660 aaKnown RBP28.42■■■□□ 2.14
SNRNP70-209ENST00000601065 ZNF428Q96B54 188 aa28.42■■■□□ 2.14
SNRNP70-209ENST00000601065 RGS12O14924 1447 aa28.42■■■□□ 2.14
SNRNP70-209ENST00000601065 EP400Q96L91 3159 aa28.41■■■□□ 2.14
SNRNP70-209ENST00000601065 SOS1Q07889 1333 aaPredicted RBP28.4■■■□□ 2.14
SNRNP70-209ENST00000601065 ZNF496Q96IT1 587 aaPredicted RBP28.39■■■□□ 2.14
SNRNP70-209ENST00000601065 KCPQ6ZWJ8 1503 aa28.39■■■□□ 2.14
SNRNP70-209ENST00000601065 KCNQ2O43526 872 aa28.39■■■□□ 2.13
SNRNP70-209ENST00000601065 NEFLP07196 543 aa28.39■■■□□ 2.13
SNRNP70-209ENST00000601065 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.13
SNRNP70-209ENST00000601065 HOXB7P09629 217 aa28.38■■■□□ 2.13
SNRNP70-209ENST00000601065 FMNL2Q96PY5 1086 aa28.38■■■□□ 2.13
SNRNP70-209ENST00000601065 ATG3Q9NT62 314 aa28.38■■■□□ 2.13
SNRNP70-209ENST00000601065 NHSQ6T4R5 1651 aa28.38■■■□□ 2.13
SNRNP70-209ENST00000601065 RNF123Q5XPI4 1314 aa28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 SBF2Q86WG5 1849 aa28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 GIGYF1O75420 1035 aaPredicted RBP28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 BCAR3O75815 825 aa28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 SSH1Q8WYL5 1049 aa28.37■■■□□ 2.13
SNRNP70-209ENST00000601065 BCL2L13Q9BXK5 485 aa28.36■■■□□ 2.13
SNRNP70-209ENST00000601065 FAM196AQ6ZSG2 479 aa28.34■■■□□ 2.13
SNRNP70-209ENST00000601065 C5P01031 1676 aa28.33■■■□□ 2.13
SNRNP70-209ENST00000601065 PRAMEF22A3QJZ6 481 aa28.33■■■□□ 2.13
SNRNP70-209ENST00000601065 IRX6P78412 446 aaPredicted RBP28.33■■■□□ 2.13
SNRNP70-209ENST00000601065 FKBP8Q14318 412 aa28.33■■■□□ 2.13
SNRNP70-209ENST00000601065 SMC4Q9NTJ3 1288 aa28.33■■■□□ 2.13
SNRNP70-209ENST00000601065 PTCD1O75127 700 aaKnown RBP28.32■■■□□ 2.12
SNRNP70-209ENST00000601065 RRP1P56182 461 aaKnown RBP28.32■■■□□ 2.12
SNRNP70-209ENST00000601065 SNRPA1P09661 255 aaKnown RBP28.32■■■□□ 2.12
SNRNP70-209ENST00000601065 PTF1AQ7RTS3 328 aa28.31■■■□□ 2.12
SNRNP70-209ENST00000601065 TCERG1O14776 1098 aaKnown RBP28.3■■■□□ 2.12
SNRNP70-209ENST00000601065 HDGFL1Q5TGJ6 251 aa28.3■■■□□ 2.12
SNRNP70-209ENST00000601065 BTAF1O14981 1849 aa28.3■■■□□ 2.12
SNRNP70-209ENST00000601065 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
SNRNP70-209ENST00000601065 EIF2S2P20042 333 aaKnown RBP28.29■■■□□ 2.12
SNRNP70-209ENST00000601065 BRPF1P55201 1214 aaPredicted RBP28.29■■■□□ 2.12
SNRNP70-209ENST00000601065 MRPL50Q8N5N7 158 aaKnown RBP28.28■■■□□ 2.12
SNRNP70-209ENST00000601065 NECTIN2Q92692 538 aa28.28■■■□□ 2.12
SNRNP70-209ENST00000601065 CHMP4AQ9BY43 222 aa28.28■■■□□ 2.12
SNRNP70-209ENST00000601065 VSIG10Q8N0Z9 540 aa28.27■■■□□ 2.12
SNRNP70-209ENST00000601065 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
SNRNP70-209ENST00000601065 RBM42Q9BTD8 480 aaKnown RBP28.27■■■□□ 2.12
SNRNP70-209ENST00000601065 PALLDQ8WX93 1383 aa28.26■■■□□ 2.11
SNRNP70-209ENST00000601065 PLIN1O60240 522 aa28.26■■■□□ 2.11
SNRNP70-209ENST00000601065 SMARCC1Q92922 1105 aaPredicted RBP28.26■■■□□ 2.11
SNRNP70-209ENST00000601065 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
SNRNP70-209ENST00000601065 USP16Q9Y5T5 823 aa28.26■■■□□ 2.11
SNRNP70-209ENST00000601065 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.25■■■□□ 2.11
SNRNP70-209ENST00000601065 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
SNRNP70-209ENST00000601065 SLC4A9Q96Q91 983 aa28.24■■■□□ 2.11
SNRNP70-209ENST00000601065 CACNA1FO60840 1977 aa28.24■■■□□ 2.11
SNRNP70-209ENST00000601065 SLC4A2P04920 1241 aa28.24■■■□□ 2.11
SNRNP70-209ENST00000601065 FRAT1Q92837 279 aaPredicted RBP28.24■■■□□ 2.11
SNRNP70-209ENST00000601065 KIF16BQ96L93 1317 aa28.24■■■□□ 2.11
SNRNP70-209ENST00000601065 CHPF2Q9P2E5 772 aa28.22■■■□□ 2.11
SNRNP70-209ENST00000601065 NOB1Q9ULX3 412 aaKnown RBP28.22■■■□□ 2.11
SNRNP70-209ENST00000601065 LOC102724428A0A0B4J2F2 783 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms