RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FAM208AQ9UK61 1670 aaKnown RBP24.85■■□□□ 1.57
SHKBP1-225ENST00000600733 ARHGAP23Q9P227 1491 aa24.85■■□□□ 1.57
SHKBP1-225ENST00000600733 PNMA6EA0A0J9YXQ4 647 aa24.85■■□□□ 1.57
SHKBP1-225ENST00000600733 HOXC9P31274 260 aa24.85■■□□□ 1.57
SHKBP1-225ENST00000600733 CCDC30Q5VVM6 783 aa24.85■■□□□ 1.57
SHKBP1-225ENST00000600733 ST18O60284 1047 aa24.84■■□□□ 1.57
SHKBP1-225ENST00000600733 LTV1Q96GA3 475 aaPredicted RBP24.84■■□□□ 1.57
SHKBP1-225ENST00000600733 HTATSF1O43719 755 aaKnown RBP24.84■■□□□ 1.57
SHKBP1-225ENST00000600733 ZGPATQ8N5A5 531 aaKnown RBP24.84■■□□□ 1.57
SHKBP1-225ENST00000600733 IL17REQ8NFR9 667 aa24.83■■□□□ 1.57
SHKBP1-225ENST00000600733 XRN1Q8IZH2 1706 aaKnown RBP24.83■■□□□ 1.57
SHKBP1-225ENST00000600733 SALL3Q9BXA9 1300 aa24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 CYP2E1P05181 493 aaPredicted RBP24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 NUCB2P80303 420 aa24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 LRRCC1Q9C099 1032 aa24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 DDX49Q9Y6V7 483 aaKnown RBP24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 MCTP1Q6DN14 999 aa24.82■■□□□ 1.56
SHKBP1-225ENST00000600733 GNAI3P08754 354 aa24.81■■□□□ 1.56
SHKBP1-225ENST00000600733 MARF1Q9Y4F3 1742 aaKnown RBP24.81■■□□□ 1.56
SHKBP1-225ENST00000600733 KLHL40Q2TBA0 621 aa24.8■■□□□ 1.56
SHKBP1-225ENST00000600733 LRRFIP2Q9Y608 721 aaKnown RBP24.8■■□□□ 1.56
SHKBP1-225ENST00000600733 MAP3K5Q99683 1374 aa24.8■■□□□ 1.56
SHKBP1-225ENST00000600733 MX1P20591 662 aa24.79■■□□□ 1.56
SHKBP1-225ENST00000600733 KCNA6P17658 529 aa24.79■■□□□ 1.56
SHKBP1-225ENST00000600733 ATP8B2P98198 1209 aa24.79■■□□□ 1.56
SHKBP1-225ENST00000600733 USHBP1Q8N6Y0 703 aa24.79■■□□□ 1.56
SHKBP1-225ENST00000600733 ABTB2Q8N961 1025 aa24.79■■□□□ 1.56
SHKBP1-225ENST00000600733 TUBGCP6Q96RT7 1819 aa24.78■■□□□ 1.56
SHKBP1-225ENST00000600733 CWC22Q9HCG8 908 aaKnown RBP24.78■■□□□ 1.56
SHKBP1-225ENST00000600733 IBTKQ9P2D0 1353 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-225ENST00000600733 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-225ENST00000600733 ESYT1Q9BSJ8 1104 aa24.77■■□□□ 1.56
SHKBP1-225ENST00000600733 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
SHKBP1-225ENST00000600733 THEMISQ8N1K5 641 aaPredicted RBP24.76■■□□□ 1.55
SHKBP1-225ENST00000600733 RILPL2Q969X0 211 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 USP44Q9H0E7 712 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 TRIM6-TRIM34B2RNG4 842 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 NEK4P51957 841 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 C14orf37Q86TY3 774 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 ZDHHC9Q9Y397 364 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 ANKARQ7Z5J8 1434 aa24.75■■□□□ 1.55
SHKBP1-225ENST00000600733 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
SHKBP1-225ENST00000600733 LMBRD1Q9NUN5 540 aa24.74■■□□□ 1.55
SHKBP1-225ENST00000600733 CLCN1P35523 988 aa24.73■■□□□ 1.55
SHKBP1-225ENST00000600733 HDGFL1Q5TGJ6 251 aa24.73■■□□□ 1.55
SHKBP1-225ENST00000600733 PALD1Q9ULE6 856 aa24.73■■□□□ 1.55
SHKBP1-225ENST00000600733 ERBB4Q15303 1308 aa24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 UBTFL1P0CB47 393 aaPredicted RBP24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 NCLP19338 710 aaKnown RBP24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 CHMLP26374 656 aa24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 UNC5CLQ8IV45 518 aa24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 CHAMP1Q96JM3 812 aa24.72■■□□□ 1.55
SHKBP1-225ENST00000600733 N4BP2Q86UW6 1770 aaPredicted RBP24.71■■□□□ 1.55
SHKBP1-225ENST00000600733 CAVIN1Q6NZI2 390 aaKnown RBP24.71■■□□□ 1.55
SHKBP1-225ENST00000600733 TMX3Q96JJ7 454 aa24.71■■□□□ 1.55
SHKBP1-225ENST00000600733 IL1RAPL2Q9NP60 686 aa24.71■■□□□ 1.55
SHKBP1-225ENST00000600733 ANO2Q9NQ90 1003 aa24.71■■□□□ 1.55
SHKBP1-225ENST00000600733 SOS1Q07889 1333 aaPredicted RBP24.7■■□□□ 1.55
SHKBP1-225ENST00000600733 STAP2Q9UGK3 403 aa24.7■■□□□ 1.55
SHKBP1-225ENST00000600733 PXDNLA1KZ92 1463 aa24.7■■□□□ 1.54
SHKBP1-225ENST00000600733 BABAM1Q9NWV8 329 aa24.69■■□□□ 1.54
SHKBP1-225ENST00000600733 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
SHKBP1-225ENST00000600733 ESPNB1AK53 854 aa24.69■■□□□ 1.54
SHKBP1-225ENST00000600733 TRIM44Q96DX7 344 aaPredicted RBP24.69■■□□□ 1.54
SHKBP1-225ENST00000600733 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
SHKBP1-225ENST00000600733 PRPF40AO75400 957 aaKnown RBP24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 EIF2S2P20042 333 aaKnown RBP24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 NASPP49321 788 aaPredicted RBP24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 USP54Q70EL1 1684 aa24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 FOXD4L5Q5VV16 416 aaPredicted RBP24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 FOXD4L4Q8WXT5 416 aaPredicted RBP24.68■■□□□ 1.54
SHKBP1-225ENST00000600733 LTN1O94822 1766 aa24.67■■□□□ 1.54
SHKBP1-225ENST00000600733 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
SHKBP1-225ENST00000600733 MCCP23508 829 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 ZSCAN23Q3MJ62 389 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 NOL8Q76FK4 1167 aaKnown RBP24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 NUTM1Q86Y26 1132 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 SSH3Q8TE77 659 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 IL25Q9H293 177 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 PPP1R42Q7Z4L9 355 aa24.66■■□□□ 1.54
SHKBP1-225ENST00000600733 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
SHKBP1-225ENST00000600733 LGR6Q9HBX8 967 aa24.65■■□□□ 1.54
SHKBP1-225ENST00000600733 CEMIPQ8WUJ3 1361 aa24.65■■□□□ 1.54
SHKBP1-225ENST00000600733 ZNF445P59923 1031 aa24.65■■□□□ 1.54
SHKBP1-225ENST00000600733 GPT2Q8TD30 523 aa24.65■■□□□ 1.54
SHKBP1-225ENST00000600733 SURF6O75683 361 aaKnown RBP24.64■■□□□ 1.54
SHKBP1-225ENST00000600733 NBPF6Q5VWK0 638 aa24.64■■□□□ 1.54
SHKBP1-225ENST00000600733 NBPF4Q96M43 638 aa24.64■■□□□ 1.54
SHKBP1-225ENST00000600733 PHF8Q9UPP1 1060 aa24.64■■□□□ 1.53
SHKBP1-225ENST00000600733 MAP4K4O95819 1239 aaPredicted RBP24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 MCM2P49736 904 aa24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 ANAPC15P60006 121 aa24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 CHPF2Q9P2E5 772 aa24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 ZBTB7CA1YPR0 619 aa24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 NBPF7P0C2Y1 421 aaPredicted RBP24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 EIF4A1P60842 406 aaKnown RBP24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 UPF3BQ9BZI7 483 aaKnown RBP24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 RBM27Q9P2N5 1060 aaKnown RBP24.63■■□□□ 1.53
SHKBP1-225ENST00000600733 KCNQ3O43525 872 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms