RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 NFATC2IPQ8NCF5 419 aa21.04■□□□□ 0.96
IRF3-226ENST00000600453 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
IRF3-226ENST00000600453 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
IRF3-226ENST00000600453 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
IRF3-226ENST00000600453 SSFA2P28290 1259 aa21.03■□□□□ 0.96
IRF3-226ENST00000600453 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
IRF3-226ENST00000600453 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
IRF3-226ENST00000600453 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
IRF3-226ENST00000600453 KDM6AO15550 1401 aaPredicted RBP21.01■□□□□ 0.95
IRF3-226ENST00000600453 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
IRF3-226ENST00000600453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
IRF3-226ENST00000600453 ITPK1Q13572 414 aa21■□□□□ 0.95
IRF3-226ENST00000600453 RC3H1Q5TC82 1133 aaKnown RBP21■□□□□ 0.95
IRF3-226ENST00000600453 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
IRF3-226ENST00000600453 COL24A1Q17RW2 1714 aa20.98■□□□□ 0.95
IRF3-226ENST00000600453 GNPATO15228 680 aa20.98■□□□□ 0.95
IRF3-226ENST00000600453 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
IRF3-226ENST00000600453 PHF14O94880 888 aa20.98■□□□□ 0.95
IRF3-226ENST00000600453 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
IRF3-226ENST00000600453 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
IRF3-226ENST00000600453 RTCBQ9Y3I0 505 aaKnown RBP20.98■□□□□ 0.95
IRF3-226ENST00000600453 PPP2R1AP30153 589 aa20.97■□□□□ 0.95
IRF3-226ENST00000600453 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
IRF3-226ENST00000600453 GAS2L2Q8NHY3 880 aa20.97■□□□□ 0.95
IRF3-226ENST00000600453 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
IRF3-226ENST00000600453 LGR6Q9HBX8 967 aa20.96■□□□□ 0.95
IRF3-226ENST00000600453 ADRA2BP18089 450 aa20.95■□□□□ 0.94
IRF3-226ENST00000600453 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
IRF3-226ENST00000600453 ZNF831Q5JPB2 1677 aa20.95■□□□□ 0.94
IRF3-226ENST00000600453 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
IRF3-226ENST00000600453 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
IRF3-226ENST00000600453 YY1P25490 414 aa20.94■□□□□ 0.94
IRF3-226ENST00000600453 SLC4A9Q96Q91 983 aa20.94■□□□□ 0.94
IRF3-226ENST00000600453 CNTNAP4Q9C0A0 1308 aa20.94■□□□□ 0.94
IRF3-226ENST00000600453 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
IRF3-226ENST00000600453 GNAT3A8MTJ3 354 aa20.93■□□□□ 0.94
IRF3-226ENST00000600453 RPS6KA4O75676 772 aa20.93■□□□□ 0.94
IRF3-226ENST00000600453 CD2APQ9Y5K6 639 aa20.93■□□□□ 0.94
IRF3-226ENST00000600453 FCHSD2O94868 740 aa20.92■□□□□ 0.94
IRF3-226ENST00000600453 GPR162Q16538 588 aa20.92■□□□□ 0.94
IRF3-226ENST00000600453 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
IRF3-226ENST00000600453 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
IRF3-226ENST00000600453 AMIGO3Q86WK7 504 aa20.91■□□□□ 0.94
IRF3-226ENST00000600453 NLGN1Q8N2Q7 840 aa20.91■□□□□ 0.94
IRF3-226ENST00000600453 RFC4P35249 363 aa20.9■□□□□ 0.94
IRF3-226ENST00000600453 TEFQ10587 303 aa20.9■□□□□ 0.94
IRF3-226ENST00000600453 PRKAR2BP31323 418 aa20.89■□□□□ 0.93
IRF3-226ENST00000600453 ARHGEF1Q92888 912 aaKnown RBP20.89■□□□□ 0.93
IRF3-226ENST00000600453 NEFMP07197 916 aa20.88■□□□□ 0.93
IRF3-226ENST00000600453 CRKLP46109 303 aaKnown RBP20.88■□□□□ 0.93
IRF3-226ENST00000600453 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
IRF3-226ENST00000600453 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
IRF3-226ENST00000600453 VSIG10Q8N0Z9 540 aa20.88■□□□□ 0.93
IRF3-226ENST00000600453 RSPH6AQ9H0K4 717 aa20.88■□□□□ 0.93
IRF3-226ENST00000600453 GRIN3BO60391 1043 aa20.86■□□□□ 0.93
IRF3-226ENST00000600453 SLC39A6Q13433 755 aa20.86■□□□□ 0.93
IRF3-226ENST00000600453 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
IRF3-226ENST00000600453 RALBP1Q15311 655 aa20.85■□□□□ 0.93
IRF3-226ENST00000600453 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
IRF3-226ENST00000600453 NLGN2Q8NFZ4 835 aa20.85■□□□□ 0.93
IRF3-226ENST00000600453 RTF1Q92541 710 aaKnown RBP20.85■□□□□ 0.93
IRF3-226ENST00000600453 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
IRF3-226ENST00000600453 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
IRF3-226ENST00000600453 MRC1P22897 1456 aa20.85■□□□□ 0.93
IRF3-226ENST00000600453 VIRMAQ69YN4 1812 aaKnown RBP20.84■□□□□ 0.93
IRF3-226ENST00000600453 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
IRF3-226ENST00000600453 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
IRF3-226ENST00000600453 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.93
IRF3-226ENST00000600453 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.93
IRF3-226ENST00000600453 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.93
IRF3-226ENST00000600453 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.92
IRF3-226ENST00000600453 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.92
IRF3-226ENST00000600453 STARD3NLO95772 234 aa20.82■□□□□ 0.92
IRF3-226ENST00000600453 MMP10P09238 476 aa20.82■□□□□ 0.92
IRF3-226ENST00000600453 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
IRF3-226ENST00000600453 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
IRF3-226ENST00000600453 GYS1P13807 737 aa20.81■□□□□ 0.92
IRF3-226ENST00000600453 ZNF790Q6PG37 636 aa20.81■□□□□ 0.92
IRF3-226ENST00000600453 CHD4Q14839 1912 aa20.8■□□□□ 0.92
IRF3-226ENST00000600453 ZPR1O75312 459 aa20.8■□□□□ 0.92
IRF3-226ENST00000600453 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
IRF3-226ENST00000600453 PARP3Q9Y6F1 533 aa20.8■□□□□ 0.92
IRF3-226ENST00000600453 CICQ96RK0 1608 aaPredicted RBP20.79■□□□□ 0.92
IRF3-226ENST00000600453 BTBD11A6QL63 1104 aa20.79■□□□□ 0.92
IRF3-226ENST00000600453 CEMIPQ8WUJ3 1361 aa20.79■□□□□ 0.92
IRF3-226ENST00000600453 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
IRF3-226ENST00000600453 TGFB2P61812 414 aa20.77■□□□□ 0.92
IRF3-226ENST00000600453 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.91
IRF3-226ENST00000600453 TJP1Q07157 1748 aa20.76■□□□□ 0.91
IRF3-226ENST00000600453 A0A087WZG4 1122 aa20.76■□□□□ 0.91
IRF3-226ENST00000600453 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
IRF3-226ENST00000600453 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
IRF3-226ENST00000600453 KCPQ6ZWJ8 1503 aa20.75■□□□□ 0.91
IRF3-226ENST00000600453 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
IRF3-226ENST00000600453 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
IRF3-226ENST00000600453 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
IRF3-226ENST00000600453 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
IRF3-226ENST00000600453 YBX3P16989 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
IRF3-226ENST00000600453 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
IRF3-226ENST00000600453 MCM10Q7L590 875 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms