RNA–Protein interactions for RNA: ENST00000597353.5

SNRPA-203, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-203ENST00000597353 AMIGO3Q86WK7 504 aa28.94■■■□□ 2.22
SNRPA-203ENST00000597353 SGIP1Q9BQI5 828 aa28.94■■■□□ 2.22
SNRPA-203ENST00000597353 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
SNRPA-203ENST00000597353 NUDCQ9Y266 331 aa28.94■■■□□ 2.22
SNRPA-203ENST00000597353 SCN11AQ9UI33 1791 aa28.93■■■□□ 2.22
SNRPA-203ENST00000597353 TAF1LQ8IZX4 1826 aa28.93■■■□□ 2.22
SNRPA-203ENST00000597353 RALBP1Q15311 655 aa28.93■■■□□ 2.22
SNRPA-203ENST00000597353 LINC00116Q8NCU8 138 aa28.93■■■□□ 2.22
SNRPA-203ENST00000597353 ATF5Q9Y2D1 282 aaPredicted RBP28.93■■■□□ 2.22
SNRPA-203ENST00000597353 U2AF1L5P0DN76 240 aaPredicted RBP28.92■■■□□ 2.22
SNRPA-203ENST00000597353 U2AF1Q01081 240 aaKnown RBP eCLIP28.92■■■□□ 2.22
SNRPA-203ENST00000597353 MTFR1LQ9H019 292 aa28.92■■■□□ 2.22
SNRPA-203ENST00000597353 SLC52A2Q9HAB3 445 aa28.91■■■□□ 2.22
SNRPA-203ENST00000597353 C4BP0C0L5 1744 aa28.91■■■□□ 2.22
SNRPA-203ENST00000597353 COL23A1Q86Y22 540 aaPredicted RBP28.89■■■□□ 2.22
SNRPA-203ENST00000597353 GAS2L2Q8NHY3 880 aa28.89■■■□□ 2.22
SNRPA-203ENST00000597353 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
SNRPA-203ENST00000597353 FCHSD2O94868 740 aa28.88■■■□□ 2.21
SNRPA-203ENST00000597353 ATP6V1AP38606 617 aa28.87■■■□□ 2.21
SNRPA-203ENST00000597353 IL17REQ8NFR9 667 aa28.87■■■□□ 2.21
SNRPA-203ENST00000597353 SMIM5Q71RC9 77 aa28.86■■■□□ 2.21
SNRPA-203ENST00000597353 ZNF831Q5JPB2 1677 aa28.86■■■□□ 2.21
SNRPA-203ENST00000597353 SLC16A10Q8TF71 515 aa28.85■■■□□ 2.21
SNRPA-203ENST00000597353 GNAT3A8MTJ3 354 aa28.84■■■□□ 2.21
SNRPA-203ENST00000597353 RBM42Q9BTD8 480 aaKnown RBP28.84■■■□□ 2.21
SNRPA-203ENST00000597353 MYBBP1AQ9BQG0 1328 aaKnown RBP28.83■■■□□ 2.21
SNRPA-203ENST00000597353 CEMIPQ8WUJ3 1361 aa28.83■■■□□ 2.21
SNRPA-203ENST00000597353 PTCD1O75127 700 aaKnown RBP28.82■■■□□ 2.2
SNRPA-203ENST00000597353 HMGB2P26583 209 aaKnown RBP28.82■■■□□ 2.2
SNRPA-203ENST00000597353 AK7Q96M32 723 aa28.82■■■□□ 2.2
SNRPA-203ENST00000597353 SLC39A6Q13433 755 aa28.81■■■□□ 2.2
SNRPA-203ENST00000597353 COL24A1Q17RW2 1714 aa28.8■■■□□ 2.2
SNRPA-203ENST00000597353 KCPQ6ZWJ8 1503 aa28.8■■■□□ 2.2
SNRPA-203ENST00000597353 PLEKHF1Q96S99 279 aa28.8■■■□□ 2.2
SNRPA-203ENST00000597353 PRKRIP1Q9H875 184 aaPredicted RBP28.8■■■□□ 2.2
SNRPA-203ENST00000597353 PPP1R1BQ9UD71 204 aaPredicted RBP28.8■■■□□ 2.2
SNRPA-203ENST00000597353 UBR3Q6ZT12 1888 aa28.8■■■□□ 2.2
SNRPA-203ENST00000597353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.78■■■□□ 2.2
SNRPA-203ENST00000597353 CICQ96RK0 1608 aaPredicted RBP28.78■■■□□ 2.2
SNRPA-203ENST00000597353 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
SNRPA-203ENST00000597353 COL5A3P25940 1745 aaPredicted RBP28.77■■■□□ 2.2
SNRPA-203ENST00000597353 CNTNAP4Q9C0A0 1308 aa28.76■■■□□ 2.19
SNRPA-203ENST00000597353 GNPATO15228 680 aa28.76■■■□□ 2.19
SNRPA-203ENST00000597353 SSFA2P28290 1259 aa28.76■■■□□ 2.19
SNRPA-203ENST00000597353 RC3H1Q5TC82 1133 aaKnown RBP28.76■■■□□ 2.19
SNRPA-203ENST00000597353 FLAD1Q8NFF5 587 aa28.76■■■□□ 2.19
SNRPA-203ENST00000597353 TJP1Q07157 1748 aa28.76■■■□□ 2.19
SNRPA-203ENST00000597353 PHF14O94880 888 aa28.75■■■□□ 2.19
SNRPA-203ENST00000597353 ZNF316A6NFI3 1004 aaPredicted RBP28.74■■■□□ 2.19
SNRPA-203ENST00000597353 SIPA1L3O60292 1781 aaPredicted RBP28.73■■■□□ 2.19
SNRPA-203ENST00000597353 MSH5O43196 834 aa28.73■■■□□ 2.19
SNRPA-203ENST00000597353 MSL1Q68DK7 614 aa28.73■■■□□ 2.19
SNRPA-203ENST00000597353 ARXQ96QS3 562 aa28.73■■■□□ 2.19
SNRPA-203ENST00000597353 TEFQ10587 303 aa28.71■■■□□ 2.19
SNRPA-203ENST00000597353 MCM10Q7L590 875 aa28.71■■■□□ 2.19
SNRPA-203ENST00000597353 DNAJC10Q8IXB1 793 aa28.71■■■□□ 2.19
SNRPA-203ENST00000597353 FHDC1Q9C0D6 1143 aaPredicted RBP28.71■■■□□ 2.19
SNRPA-203ENST00000597353 MYH14Q7Z406 1995 aaKnown RBP28.71■■■□□ 2.19
SNRPA-203ENST00000597353 UBR2Q8IWV8 1755 aa28.7■■■□□ 2.19
SNRPA-203ENST00000597353 CRKLP46109 303 aaKnown RBP28.7■■■□□ 2.18
SNRPA-203ENST00000597353 DCTN1Q14203 1278 aa28.7■■■□□ 2.18
SNRPA-203ENST00000597353 INTS5Q6P9B9 1019 aaKnown RBP28.69■■■□□ 2.18
SNRPA-203ENST00000597353 UTRNP46939 3433 aa28.69■■■□□ 2.18
SNRPA-203ENST00000597353 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
SNRPA-203ENST00000597353 RPS6KA4O75676 772 aa28.68■■■□□ 2.18
SNRPA-203ENST00000597353 ZNF790Q6PG37 636 aa28.68■■■□□ 2.18
SNRPA-203ENST00000597353 KCNQ3O43525 872 aa28.67■■■□□ 2.18
SNRPA-203ENST00000597353 ZNF496Q96IT1 587 aaPredicted RBP28.67■■■□□ 2.18
SNRPA-203ENST00000597353 SYT17Q9BSW7 474 aa28.67■■■□□ 2.18
SNRPA-203ENST00000597353 RTCBQ9Y3I0 505 aaKnown RBP28.67■■■□□ 2.18
SNRPA-203ENST00000597353 GOLGB1Q14789 3259 aaKnown RBP28.66■■■□□ 2.18
SNRPA-203ENST00000597353 CYP19A1P11511 503 aaPredicted RBP28.66■■■□□ 2.18
SNRPA-203ENST00000597353 POLD1P28340 1107 aa28.66■■■□□ 2.18
SNRPA-203ENST00000597353 NFE2L2Q16236 605 aa28.66■■■□□ 2.18
SNRPA-203ENST00000597353 VSIG10Q8N0Z9 540 aa28.66■■■□□ 2.18
SNRPA-203ENST00000597353 ADRA2BP18089 450 aa28.64■■■□□ 2.18
SNRPA-203ENST00000597353 RTF1Q92541 710 aaKnown RBP28.64■■■□□ 2.18
SNRPA-203ENST00000597353 ARHGEF1Q92888 912 aaKnown RBP28.64■■■□□ 2.18
SNRPA-203ENST00000597353 HEG1Q9ULI3 1381 aa28.62■■■□□ 2.17
SNRPA-203ENST00000597353 TRAPPC3LQ5T215 181 aa28.62■■■□□ 2.17
SNRPA-203ENST00000597353 TTC5Q8N0Z6 440 aa28.62■■■□□ 2.17
SNRPA-203ENST00000597353 BTBD11A6QL63 1104 aa28.61■■■□□ 2.17
SNRPA-203ENST00000597353 CCDC87Q9NVE4 849 aa28.61■■■□□ 2.17
SNRPA-203ENST00000597353 PNNQ9H307 717 aaKnown RBP28.6■■■□□ 2.17
SNRPA-203ENST00000597353 SOS1Q07889 1333 aaPredicted RBP28.6■■■□□ 2.17
SNRPA-203ENST00000597353 ZBTB1Q9Y2K1 713 aa28.59■■■□□ 2.17
SNRPA-203ENST00000597353 MAPK8IP3Q9UPT6 1336 aa28.59■■■□□ 2.17
SNRPA-203ENST00000597353 NEFMP07197 916 aa28.58■■■□□ 2.17
SNRPA-203ENST00000597353 THUMPD2Q9BTF0 503 aaKnown RBP28.58■■■□□ 2.17
SNRPA-203ENST00000597353 ADAMTS8Q9UP79 889 aa28.58■■■□□ 2.17
SNRPA-203ENST00000597353 DLG5Q8TDM6 1919 aa28.57■■■□□ 2.16
SNRPA-203ENST00000597353 GYS1P13807 737 aa28.57■■■□□ 2.16
SNRPA-203ENST00000597353 C4AP0C0L4 1744 aa28.57■■■□□ 2.16
SNRPA-203ENST00000597353 CCDC184Q52MB2 194 aa28.56■■■□□ 2.16
SNRPA-203ENST00000597353 CCDC146Q8IYE0 955 aa28.56■■■□□ 2.16
SNRPA-203ENST00000597353 FMNL2Q96PY5 1086 aa28.56■■■□□ 2.16
SNRPA-203ENST00000597353 TAF7Q15545 349 aaPredicted RBP28.55■■■□□ 2.16
SNRPA-203ENST00000597353 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
SNRPA-203ENST00000597353 SRP68Q9UHB9 627 aaKnown RBP28.55■■■□□ 2.16
SNRPA-203ENST00000597353 USP42Q9H9J4 1324 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms