RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
MBD1-227ENST00000592060 ADAMTS7Q9UKP4 1686 aa19.66■□□□□ 0.74
MBD1-227ENST00000592060 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
MBD1-227ENST00000592060 SLC4A10Q6U841 1118 aa19.65■□□□□ 0.74
MBD1-227ENST00000592060 AKAP4Q5JQC9 854 aa19.64■□□□□ 0.74
MBD1-227ENST00000592060 ANKRD24Q8TF21 1146 aa19.64■□□□□ 0.74
MBD1-227ENST00000592060 LGR6Q9HBX8 967 aa19.64■□□□□ 0.74
MBD1-227ENST00000592060 CRYBG1Q9Y4K1 1723 aa19.64■□□□□ 0.74
MBD1-227ENST00000592060 NCOA3Q9Y6Q9 1424 aa19.64■□□□□ 0.74
MBD1-227ENST00000592060 RBM25P49756 843 aaKnown RBP19.64■□□□□ 0.73
MBD1-227ENST00000592060 TMEM94Q12767 1356 aa19.63■□□□□ 0.73
MBD1-227ENST00000592060 GSPT1P15170 499 aaKnown RBP19.63■□□□□ 0.73
MBD1-227ENST00000592060 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
MBD1-227ENST00000592060 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
MBD1-227ENST00000592060 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
MBD1-227ENST00000592060 FKBP5Q13451 457 aaPredicted RBP19.63■□□□□ 0.73
MBD1-227ENST00000592060 AMOTQ4VCS5 1084 aa19.63■□□□□ 0.73
MBD1-227ENST00000592060 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
MBD1-227ENST00000592060 COL18A1P39060 1754 aa19.62■□□□□ 0.73
MBD1-227ENST00000592060 HOXB7P09629 217 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 TBC1D9Q6ZT07 1266 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 ANTXR1Q9H6X2 564 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 HMMRO75330 724 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 TTC22Q5TAA0 569 aa19.61■□□□□ 0.73
MBD1-227ENST00000592060 GNAI2P04899 355 aa19.6■□□□□ 0.73
MBD1-227ENST00000592060 CDC45O75419 566 aa19.59■□□□□ 0.73
MBD1-227ENST00000592060 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
MBD1-227ENST00000592060 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
MBD1-227ENST00000592060 TUBGCP6Q96RT7 1819 aa19.59■□□□□ 0.73
MBD1-227ENST00000592060 RNMTO43148 476 aaKnown RBP19.59■□□□□ 0.73
MBD1-227ENST00000592060 OTUD7AQ8TE49 926 aaPredicted RBP19.59■□□□□ 0.73
MBD1-227ENST00000592060 ABCC6O95255 1503 aa19.58■□□□□ 0.73
MBD1-227ENST00000592060 ERBB3P21860 1342 aa19.58■□□□□ 0.73
MBD1-227ENST00000592060 PLEKHG5O94827 1062 aa19.58■□□□□ 0.73
MBD1-227ENST00000592060 GNAI3P08754 354 aa19.58■□□□□ 0.73
MBD1-227ENST00000592060 ATF3P18847 181 aa19.58■□□□□ 0.73
MBD1-227ENST00000592060 KCNQ3O43525 872 aa19.57■□□□□ 0.72
MBD1-227ENST00000592060 SMARCA5O60264 1052 aaPredicted RBP19.57■□□□□ 0.72
MBD1-227ENST00000592060 TEFQ10587 303 aa19.57■□□□□ 0.72
MBD1-227ENST00000592060 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
MBD1-227ENST00000592060 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
MBD1-227ENST00000592060 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
MBD1-227ENST00000592060 SCN11AQ9UI33 1791 aa19.56■□□□□ 0.72
MBD1-227ENST00000592060 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
MBD1-227ENST00000592060 BTBD11A6QL63 1104 aa19.55■□□□□ 0.72
MBD1-227ENST00000592060 TNS3Q68CZ2 1445 aa19.55■□□□□ 0.72
MBD1-227ENST00000592060 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
MBD1-227ENST00000592060 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
MBD1-227ENST00000592060 KIF2CQ99661 725 aa19.54■□□□□ 0.72
MBD1-227ENST00000592060 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 SNX21Q969T3 373 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 USP44Q9H0E7 712 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 APBB1O00213 710 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 DDX17Q92841 729 aaKnown RBP19.53■□□□□ 0.72
MBD1-227ENST00000592060 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
MBD1-227ENST00000592060 PNMA6EA0A0J9YXQ4 647 aa19.52■□□□□ 0.72
MBD1-227ENST00000592060 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
MBD1-227ENST00000592060 ZC3H6P61129 1189 aaKnown RBP19.52■□□□□ 0.72
MBD1-227ENST00000592060 SALL3Q9BXA9 1300 aa19.52■□□□□ 0.72
MBD1-227ENST00000592060 OSBPL3Q9H4L5 887 aa19.52■□□□□ 0.71
MBD1-227ENST00000592060 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.71
MBD1-227ENST00000592060 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.71
MBD1-227ENST00000592060 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
MBD1-227ENST00000592060 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
MBD1-227ENST00000592060 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
MBD1-227ENST00000592060 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
MBD1-227ENST00000592060 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
MBD1-227ENST00000592060 MEGF6O75095 1541 aa19.5■□□□□ 0.71
MBD1-227ENST00000592060 ADCY9O60503 1353 aa19.5■□□□□ 0.71
MBD1-227ENST00000592060 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
MBD1-227ENST00000592060 SDSP20132 328 aa19.5■□□□□ 0.71
MBD1-227ENST00000592060 HSPA2P54652 639 aa19.5■□□□□ 0.71
MBD1-227ENST00000592060 C5P01031 1676 aa19.49■□□□□ 0.71
MBD1-227ENST00000592060 PLEKHG2Q9H7P9 1386 aa19.49■□□□□ 0.71
MBD1-227ENST00000592060 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
MBD1-227ENST00000592060 SRCIN1Q9C0H9 1055 aa19.49■□□□□ 0.71
MBD1-227ENST00000592060 KDM6AO15550 1401 aaPredicted RBP19.49■□□□□ 0.71
MBD1-227ENST00000592060 PDE1AP54750 535 aa19.48■□□□□ 0.71
MBD1-227ENST00000592060 GIGYF1O75420 1035 aaPredicted RBP19.48■□□□□ 0.71
MBD1-227ENST00000592060 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
MBD1-227ENST00000592060 DNAAF4Q8WXU2 420 aa19.48■□□□□ 0.71
MBD1-227ENST00000592060 STRCQ7RTU9 1775 aa19.48■□□□□ 0.71
MBD1-227ENST00000592060 LRRCC1Q9C099 1032 aa19.47■□□□□ 0.71
MBD1-227ENST00000592060 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
MBD1-227ENST00000592060 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
MBD1-227ENST00000592060 MRC1P22897 1456 aa19.46■□□□□ 0.71
MBD1-227ENST00000592060 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
MBD1-227ENST00000592060 DBF4Q9UBU7 674 aaPredicted RBP19.46■□□□□ 0.71
MBD1-227ENST00000592060 PI4KAP2A4QPH2 592 aa19.46■□□□□ 0.71
MBD1-227ENST00000592060 ANXA1P04083 346 aa19.46■□□□□ 0.71
MBD1-227ENST00000592060 PI4KAP1Q8N8J0 262 aa19.46■□□□□ 0.71
MBD1-227ENST00000592060 CPDO75976 1380 aa19.46■□□□□ 0.7
MBD1-227ENST00000592060 POLA2Q14181 598 aa19.45■□□□□ 0.7
MBD1-227ENST00000592060 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
MBD1-227ENST00000592060 DDIT3P35638 169 aa19.44■□□□□ 0.7
MBD1-227ENST00000592060 SPRYD3Q8NCJ5 442 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms