RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KDM4FA0A1W2PPD8 638 aa24.56■■□□□ 1.52
MBD3-209ENST00000592012 HDGFL1Q5TGJ6 251 aa24.56■■□□□ 1.52
MBD3-209ENST00000592012 DEKP35659 375 aaKnown RBP24.54■■□□□ 1.52
MBD3-209ENST00000592012 C16orf71Q8IYS4 520 aaPredicted RBP24.54■■□□□ 1.52
MBD3-209ENST00000592012 MPRIPQ6WCQ1 1025 aa24.54■■□□□ 1.52
MBD3-209ENST00000592012 STRCP1A6NGW2 1772 aa24.54■■□□□ 1.52
MBD3-209ENST00000592012 HMMRO75330 724 aa24.53■■□□□ 1.52
MBD3-209ENST00000592012 GNAI2P04899 355 aa24.53■■□□□ 1.52
MBD3-209ENST00000592012 RBM25P49756 843 aaKnown RBP24.53■■□□□ 1.52
MBD3-209ENST00000592012 ALS2Q96Q42 1657 aa24.53■■□□□ 1.52
MBD3-209ENST00000592012 GSPT1P15170 499 aaKnown RBP24.53■■□□□ 1.52
MBD3-209ENST00000592012 TEFQ10587 303 aa24.52■■□□□ 1.52
MBD3-209ENST00000592012 TBC1D9Q6ZT07 1266 aa24.52■■□□□ 1.52
MBD3-209ENST00000592012 KDM3BQ7LBC6 1761 aa24.52■■□□□ 1.52
MBD3-209ENST00000592012 HOXB7P09629 217 aa24.52■■□□□ 1.52
MBD3-209ENST00000592012 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
MBD3-209ENST00000592012 KCNQ3O43525 872 aa24.51■■□□□ 1.51
MBD3-209ENST00000592012 DCCP43146 1447 aa24.51■■□□□ 1.51
MBD3-209ENST00000592012 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
MBD3-209ENST00000592012 RNMTO43148 476 aaKnown RBP24.51■■□□□ 1.51
MBD3-209ENST00000592012 PHAXQ9H814 394 aaKnown RBP24.51■■□□□ 1.51
MBD3-209ENST00000592012 CAMTA1Q9Y6Y1 1673 aa24.51■■□□□ 1.51
MBD3-209ENST00000592012 PXDNQ92626 1479 aa24.5■■□□□ 1.51
MBD3-209ENST00000592012 GNAI3P08754 354 aa24.5■■□□□ 1.51
MBD3-209ENST00000592012 ZC3H6P61129 1189 aaKnown RBP24.5■■□□□ 1.51
MBD3-209ENST00000592012 C1orf141Q5JVX7 400 aa24.5■■□□□ 1.51
MBD3-209ENST00000592012 RGPD5Q99666 1765 aa24.5■■□□□ 1.51
MBD3-209ENST00000592012 ERBB3P21860 1342 aa24.5■■□□□ 1.51
MBD3-209ENST00000592012 DDX17Q92841 729 aaKnown RBP24.5■■□□□ 1.51
MBD3-209ENST00000592012 SMARCA5O60264 1052 aaPredicted RBP24.49■■□□□ 1.51
MBD3-209ENST00000592012 TTC22Q5TAA0 569 aa24.49■■□□□ 1.51
MBD3-209ENST00000592012 OTUD7AQ8TE49 926 aaPredicted RBP24.49■■□□□ 1.51
MBD3-209ENST00000592012 EIF2S2P20042 333 aaKnown RBP24.49■■□□□ 1.51
MBD3-209ENST00000592012 ANTXR1Q9H6X2 564 aa24.49■■□□□ 1.51
MBD3-209ENST00000592012 PXDNLA1KZ92 1463 aa24.48■■□□□ 1.51
MBD3-209ENST00000592012 APBB1O00213 710 aa24.47■■□□□ 1.51
MBD3-209ENST00000592012 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
MBD3-209ENST00000592012 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
MBD3-209ENST00000592012 CDC45O75419 566 aa24.47■■□□□ 1.51
MBD3-209ENST00000592012 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
MBD3-209ENST00000592012 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
MBD3-209ENST00000592012 USP44Q9H0E7 712 aa24.46■■□□□ 1.51
MBD3-209ENST00000592012 SLKQ9H2G2 1235 aaPredicted RBP24.46■■□□□ 1.51
MBD3-209ENST00000592012 OVOS2A0A0G2JMS6 1433 aa24.46■■□□□ 1.51
MBD3-209ENST00000592012 ATP8B2P98198 1209 aa24.45■■□□□ 1.5
MBD3-209ENST00000592012 CHPF2Q9P2E5 772 aa24.45■■□□□ 1.5
MBD3-209ENST00000592012 HSPA2P54652 639 aa24.44■■□□□ 1.5
MBD3-209ENST00000592012 PNMA6EA0A0J9YXQ4 647 aa24.43■■□□□ 1.5
MBD3-209ENST00000592012 FRAT2O75474 233 aaPredicted RBP24.43■■□□□ 1.5
MBD3-209ENST00000592012 NPHP3Q7Z494 1330 aa24.43■■□□□ 1.5
MBD3-209ENST00000592012 LRRFIP2Q9Y608 721 aaKnown RBP24.42■■□□□ 1.5
MBD3-209ENST00000592012 KIF2CQ99661 725 aa24.42■■□□□ 1.5
MBD3-209ENST00000592012 EXOC6BQ9Y2D4 811 aa24.41■■□□□ 1.5
MBD3-209ENST00000592012 HEG1Q9ULI3 1381 aa24.41■■□□□ 1.5
MBD3-209ENST00000592012 LMTK3Q96Q04 1460 aa24.4■■□□□ 1.5
MBD3-209ENST00000592012 GIGYF1O75420 1035 aaPredicted RBP24.4■■□□□ 1.5
MBD3-209ENST00000592012 UBTFL1P0CB47 393 aaPredicted RBP24.4■■□□□ 1.5
MBD3-209ENST00000592012 SRCIN1Q9C0H9 1055 aa24.4■■□□□ 1.5
MBD3-209ENST00000592012 OSBPL3Q9H4L5 887 aa24.4■■□□□ 1.5
MBD3-209ENST00000592012 SDSP20132 328 aa24.39■■□□□ 1.5
MBD3-209ENST00000592012 CABLES1Q8TDN4 633 aa24.39■■□□□ 1.5
MBD3-209ENST00000592012 SNX21Q969T3 373 aa24.39■■□□□ 1.49
MBD3-209ENST00000592012 NLRP2Q9NX02 1062 aa24.39■■□□□ 1.49
MBD3-209ENST00000592012 PI4KAP2A4QPH2 592 aa24.38■■□□□ 1.49
MBD3-209ENST00000592012 PI4KAP1Q8N8J0 262 aa24.38■■□□□ 1.49
MBD3-209ENST00000592012 RAPGEF4Q8WZA2 1011 aa24.38■■□□□ 1.49
MBD3-209ENST00000592012 COL18A1P39060 1754 aa24.38■■□□□ 1.49
MBD3-209ENST00000592012 ADAMTS7Q9UKP4 1686 aa24.38■■□□□ 1.49
MBD3-209ENST00000592012 DBF4Q9UBU7 674 aaPredicted RBP24.38■■□□□ 1.49
MBD3-209ENST00000592012 SIPA1L3O60292 1781 aaPredicted RBP24.38■■□□□ 1.49
MBD3-209ENST00000592012 EIF5BO60841 1220 aaKnown RBP24.37■■□□□ 1.49
MBD3-209ENST00000592012 ANXA1P04083 346 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 BEND3Q5T5X7 828 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 HSCBQ8IWL3 235 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 DNAAF4Q8WXU2 420 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 TNS3Q68CZ2 1445 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 PDE1AP54750 535 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 LRRCC1Q9C099 1032 aa24.37■■□□□ 1.49
MBD3-209ENST00000592012 IBTKQ9P2D0 1353 aaPredicted RBP24.36■■□□□ 1.49
MBD3-209ENST00000592012 SPRYD3Q8NCJ5 442 aa24.36■■□□□ 1.49
MBD3-209ENST00000592012 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
MBD3-209ENST00000592012 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
MBD3-209ENST00000592012 SSH3Q8TE77 659 aa24.35■■□□□ 1.49
MBD3-209ENST00000592012 CRYBG1Q9Y4K1 1723 aa24.34■■□□□ 1.49
MBD3-209ENST00000592012 ADCY9O60503 1353 aa24.34■■□□□ 1.49
MBD3-209ENST00000592012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.34■■□□□ 1.49
MBD3-209ENST00000592012 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
MBD3-209ENST00000592012 NBPF7P0C2Y1 421 aaPredicted RBP24.33■■□□□ 1.49
MBD3-209ENST00000592012 TATP17735 454 aaPredicted RBP24.33■■□□□ 1.49
MBD3-209ENST00000592012 CHRNA2Q15822 529 aa24.32■■□□□ 1.48
MBD3-209ENST00000592012 PROSER3Q2NL68 480 aa24.32■■□□□ 1.48
MBD3-209ENST00000592012 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
MBD3-209ENST00000592012 PHKG2P15735 406 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 SPG7Q9UQ90 795 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 MEGF6O75095 1541 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 CSB-PGBD3P0DP91 1061 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 PPP1R42Q7Z4L9 355 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 USP26Q9BXU7 913 aa24.31■■□□□ 1.48
MBD3-209ENST00000592012 POLA2Q14181 598 aa24.3■■□□□ 1.48
MBD3-209ENST00000592012 SLC52A2Q9HAB3 445 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms