RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C17orf53Q8N3J3 647 aaPredicted RBP14.71□□□□□ -0.06
SMARCA4-217ENST00000591595 RNF217Q8TC41 542 aa14.71□□□□□ -0.06
SMARCA4-217ENST00000591595 IFT172Q9UG01 1749 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 GLI2P10070 1586 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 MPNDQ8N594 471 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 ZNF592Q92610 1267 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 BMP2KLQ5H9B9 411 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 MAP2K1Q02750 393 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 TSPYL6Q8N831 410 aa14.7□□□□□ -0.06
SMARCA4-217ENST00000591595 GYS2P54840 703 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 GCC1Q96CN9 775 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 PHACTR3Q96KR7 559 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 SPTLC3Q9NUV7 552 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 KIF18AQ8NI77 898 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 DONSONQ9NYP3 566 aa14.69□□□□□ -0.06
SMARCA4-217ENST00000591595 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 TBC1D9Q6ZT07 1266 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 APBB1O00213 710 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 SSFA2P28290 1259 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 CASQ1P31415 396 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 CYP2C19P33261 490 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 SNX21Q969T3 373 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 POGZQ7Z3K3 1410 aa14.68□□□□□ -0.06
SMARCA4-217ENST00000591595 GOLGA6L6A8MZA4 724 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 ZBTB7BO15156 539 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 BAG4O95429 457 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 GNAI1P63096 354 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 VAMP4O75379 141 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 TNNT1P13805 278 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 ZNF428Q96B54 188 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 EMILIN1Q9Y6C2 1016 aa14.67□□□□□ -0.06
SMARCA4-217ENST00000591595 PPLO60437 1756 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 C10orf67Q8IYJ2 551 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 K7ELQ4 463 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 TDO2P48775 406 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 WAPLQ7Z5K2 1190 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 RNF214Q8ND24 703 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 ABCC3O15438 1527 aa14.66□□□□□ -0.06
SMARCA4-217ENST00000591595 ADGRB2O60241 1585 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 CLEC17AQ6ZS10 378 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 DNAJC21Q5F1R6 531 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 FBXO31Q5XUX0 539 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 RAI14Q9P0K7 980 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 SYCP1Q15431 976 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 LRSAM1Q6UWE0 723 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 MBIPQ9NS73 344 aa14.65□□□□□ -0.06
SMARCA4-217ENST00000591595 SGSM3Q96HU1 749 aa14.64□□□□□ -0.07
SMARCA4-217ENST00000591595 CDC45O75419 566 aa14.64□□□□□ -0.07
SMARCA4-217ENST00000591595 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-217ENST00000591595 DCTN1Q14203 1278 aa14.64□□□□□ -0.07
SMARCA4-217ENST00000591595 DRC1Q96MC2 740 aa14.64□□□□□ -0.07
SMARCA4-217ENST00000591595 MLH3Q9UHC1 1453 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 API5Q9BZZ5 524 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 JRKLQ9Y4A0 524 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 TRIM66O15016 1216 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 KIF1CO43896 1103 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 REC8O95072 547 aa14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-217ENST00000591595 MYO1CO00159 1063 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 YTHDC2Q9H6S0 1430 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 C8orf58Q8NAV2 365 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 TAOK2Q9UL54 1235 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 RRS1Q15050 365 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 SYT10Q6XYQ8 523 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 NME9Q86XW9 330 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 ARHGAP45Q92619 1136 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 NOL10Q9BSC4 688 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 CXorf56Q9H5V9 222 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 IFT57Q9NWB7 429 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 RBM27Q9P2N5 1060 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 SUFUQ9UMX1 484 aa14.62□□□□□ -0.07
SMARCA4-217ENST00000591595 COL3A1P02461 1466 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 SYCE3A1L190 88 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 SIRT2Q8IXJ6 389 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 GAS2L2Q8NHY3 880 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 ARHGAP31Q2M1Z3 1444 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 ST7Q9NRC1 585 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 ZNF446Q9NWS9 450 aa14.61□□□□□ -0.07
SMARCA4-217ENST00000591595 KIF2CQ99661 725 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 NEXMIFQ5QGS0 1516 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 CAMSAP1Q5T5Y3 1602 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 GOLGA6L1Q8N7Z2 621 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 ARHGEF28Q8N1W1 1705 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 ZNF853P0CG23 659 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
SMARCA4-217ENST00000591595 PNPLA6Q8IY17 1366 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 MUM1L1Q5H9M0 696 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms