RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 LOC102724428A0A0B4J2F2 783 aa27.41■■□□□ 1.98
ERCC2-212ENST00000591309 SIK1P57059 783 aa27.41■■□□□ 1.98
ERCC2-212ENST00000591309 TEFQ10587 303 aa27.41■■□□□ 1.98
ERCC2-212ENST00000591309 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
ERCC2-212ENST00000591309 ATP6V1AP38606 617 aa27.4■■□□□ 1.98
ERCC2-212ENST00000591309 SCN11AQ9UI33 1791 aa27.39■■□□□ 1.98
ERCC2-212ENST00000591309 ZNF827Q17R98 1081 aa27.38■■□□□ 1.97
ERCC2-212ENST00000591309 AKT1S1Q96B36 256 aa27.38■■□□□ 1.97
ERCC2-212ENST00000591309 PTCD1O75127 700 aaKnown RBP27.35■■□□□ 1.97
ERCC2-212ENST00000591309 AK7Q96M32 723 aa27.35■■□□□ 1.97
ERCC2-212ENST00000591309 PAPPAQ13219 1627 aa27.34■■□□□ 1.97
ERCC2-212ENST00000591309 IL17REQ8NFR9 667 aa27.34■■□□□ 1.97
ERCC2-212ENST00000591309 HTATSF1O43719 755 aaKnown RBP27.33■■□□□ 1.97
ERCC2-212ENST00000591309 TTC5Q8N0Z6 440 aa27.33■■□□□ 1.97
ERCC2-212ENST00000591309 PLEKHF1Q96S99 279 aa27.33■■□□□ 1.97
ERCC2-212ENST00000591309 SPON1Q9HCB6 807 aa27.33■■□□□ 1.97
ERCC2-212ENST00000591309 MSH5O43196 834 aa27.32■■□□□ 1.96
ERCC2-212ENST00000591309 NFE2L2Q16236 605 aa27.31■■□□□ 1.96
ERCC2-212ENST00000591309 MRC1P22897 1456 aa27.31■■□□□ 1.96
ERCC2-212ENST00000591309 SLC39A6Q13433 755 aa27.3■■□□□ 1.96
ERCC2-212ENST00000591309 FLAD1Q8NFF5 587 aa27.3■■□□□ 1.96
ERCC2-212ENST00000591309 C5P01031 1676 aa27.3■■□□□ 1.96
ERCC2-212ENST00000591309 ZBTB7AO95365 584 aa27.29■■□□□ 1.96
ERCC2-212ENST00000591309 ITPK1Q13572 414 aa27.29■■□□□ 1.96
ERCC2-212ENST00000591309 MCM10Q7L590 875 aa27.29■■□□□ 1.96
ERCC2-212ENST00000591309 VIRMAQ69YN4 1812 aaKnown RBP27.28■■□□□ 1.96
ERCC2-212ENST00000591309 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
ERCC2-212ENST00000591309 PDGFDQ9GZP0 370 aaPredicted RBP27.28■■□□□ 1.96
ERCC2-212ENST00000591309 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
ERCC2-212ENST00000591309 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
ERCC2-212ENST00000591309 SLC16A10Q8TF71 515 aa27.27■■□□□ 1.96
ERCC2-212ENST00000591309 ADAMTS8Q9UP79 889 aa27.27■■□□□ 1.96
ERCC2-212ENST00000591309 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 BTBD11A6QL63 1104 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 DCTN1Q14203 1278 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 CCDC146Q8IYE0 955 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 RUNDC1Q96C34 613 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 MTFR1LQ9H019 292 aa27.26■■□□□ 1.95
ERCC2-212ENST00000591309 PPP1R1BQ9UD71 204 aaPredicted RBP27.26■■□□□ 1.95
ERCC2-212ENST00000591309 SLC4A9Q96Q91 983 aa27.25■■□□□ 1.95
ERCC2-212ENST00000591309 ATF5Q9Y2D1 282 aaPredicted RBP27.25■■□□□ 1.95
ERCC2-212ENST00000591309 TAF1LQ8IZX4 1826 aa27.25■■□□□ 1.95
ERCC2-212ENST00000591309 GNPATO15228 680 aa27.24■■□□□ 1.95
ERCC2-212ENST00000591309 RIPK4P57078 832 aa27.24■■□□□ 1.95
ERCC2-212ENST00000591309 C4BP0C0L5 1744 aa27.24■■□□□ 1.95
ERCC2-212ENST00000591309 PHF14O94880 888 aa27.23■■□□□ 1.95
ERCC2-212ENST00000591309 LMOD3Q0VAK6 560 aa27.23■■□□□ 1.95
ERCC2-212ENST00000591309 ZNF790Q6PG37 636 aa27.23■■□□□ 1.95
ERCC2-212ENST00000591309 MRS2Q9HD23 443 aa27.23■■□□□ 1.95
ERCC2-212ENST00000591309 LRP5O75197 1615 aa27.22■■□□□ 1.95
ERCC2-212ENST00000591309 CASZ1Q86V15 1759 aa27.22■■□□□ 1.95
ERCC2-212ENST00000591309 RC3H1Q5TC82 1133 aaKnown RBP27.21■■□□□ 1.95
ERCC2-212ENST00000591309 COL23A1Q86Y22 540 aaPredicted RBP27.21■■□□□ 1.95
ERCC2-212ENST00000591309 RTCBQ9Y3I0 505 aaKnown RBP27.21■■□□□ 1.95
ERCC2-212ENST00000591309 SSFA2P28290 1259 aa27.2■■□□□ 1.94
ERCC2-212ENST00000591309 TMPOP42166 694 aaKnown RBP27.2■■□□□ 1.94
ERCC2-212ENST00000591309 TAF7Q15545 349 aaPredicted RBP27.2■■□□□ 1.94
ERCC2-212ENST00000591309 NEUROD2Q15784 382 aa27.2■■□□□ 1.94
ERCC2-212ENST00000591309 QSER1Q2KHR3 1735 aa27.2■■□□□ 1.94
ERCC2-212ENST00000591309 CNTNAP4Q9C0A0 1308 aa27.19■■□□□ 1.94
ERCC2-212ENST00000591309 VSIG10Q8N0Z9 540 aa27.19■■□□□ 1.94
ERCC2-212ENST00000591309 FMNL2Q96PY5 1086 aa27.19■■□□□ 1.94
ERCC2-212ENST00000591309 ZNF831Q5JPB2 1677 aa27.19■■□□□ 1.94
ERCC2-212ENST00000591309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.18■■□□□ 1.94
ERCC2-212ENST00000591309 POLD1P28340 1107 aa27.18■■□□□ 1.94
ERCC2-212ENST00000591309 DNAJC10Q8IXB1 793 aa27.18■■□□□ 1.94
ERCC2-212ENST00000591309 PNISRQ8TF01 805 aaKnown RBP27.18■■□□□ 1.94
ERCC2-212ENST00000591309 TRAPPC3LQ5T215 181 aa27.17■■□□□ 1.94
ERCC2-212ENST00000591309 TEX13AQ9BXU3 409 aaPredicted RBP27.17■■□□□ 1.94
ERCC2-212ENST00000591309 RRP7AQ9Y3A4 280 aaKnown RBP27.17■■□□□ 1.94
ERCC2-212ENST00000591309 CRKLP46109 303 aaKnown RBP27.16■■□□□ 1.94
ERCC2-212ENST00000591309 CCDC184Q52MB2 194 aa27.16■■□□□ 1.94
ERCC2-212ENST00000591309 ZNF496Q96IT1 587 aaPredicted RBP27.16■■□□□ 1.94
ERCC2-212ENST00000591309 RPS6KA4O75676 772 aa27.15■■□□□ 1.94
ERCC2-212ENST00000591309 STARD3NLO95772 234 aa27.15■■□□□ 1.94
ERCC2-212ENST00000591309 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
ERCC2-212ENST00000591309 TUBGCP6Q96RT7 1819 aa27.15■■□□□ 1.94
ERCC2-212ENST00000591309 KCPQ6ZWJ8 1503 aa27.14■■□□□ 1.94
ERCC2-212ENST00000591309 HEG1Q9ULI3 1381 aa27.13■■□□□ 1.93
ERCC2-212ENST00000591309 SIPA1L3O60292 1781 aaPredicted RBP27.13■■□□□ 1.93
ERCC2-212ENST00000591309 ADRA2BP18089 450 aa27.13■■□□□ 1.93
ERCC2-212ENST00000591309 THUMPD2Q9BTF0 503 aaKnown RBP27.13■■□□□ 1.93
ERCC2-212ENST00000591309 CCDC87Q9NVE4 849 aa27.13■■□□□ 1.93
ERCC2-212ENST00000591309 KCNQ3O43525 872 aa27.12■■□□□ 1.93
ERCC2-212ENST00000591309 SMIM5Q71RC9 77 aa27.12■■□□□ 1.93
ERCC2-212ENST00000591309 RFC4P35249 363 aa27.11■■□□□ 1.93
ERCC2-212ENST00000591309 UBR3Q6ZT12 1888 aa27.1■■□□□ 1.93
ERCC2-212ENST00000591309 COL5A3P25940 1745 aaPredicted RBP27.1■■□□□ 1.93
ERCC2-212ENST00000591309 CYP19A1P11511 503 aaPredicted RBP27.1■■□□□ 1.93
ERCC2-212ENST00000591309 PTGER2P43116 358 aa27.1■■□□□ 1.93
ERCC2-212ENST00000591309 MSL1Q68DK7 614 aa27.1■■□□□ 1.93
ERCC2-212ENST00000591309 AMIGO3Q86WK7 504 aa27.1■■□□□ 1.93
ERCC2-212ENST00000591309 MIS18AQ9NYP9 233 aa27.1■■□□□ 1.93
ERCC2-212ENST00000591309 APAF1O14727 1248 aa27.09■■□□□ 1.93
ERCC2-212ENST00000591309 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
ERCC2-212ENST00000591309 TJP1Q07157 1748 aa27.09■■□□□ 1.93
ERCC2-212ENST00000591309 UBR2Q8IWV8 1755 aa27.08■■□□□ 1.93
ERCC2-212ENST00000591309 SNRPA1P09661 255 aaKnown RBP27.08■■□□□ 1.93
ERCC2-212ENST00000591309 ARHGEF1Q92888 912 aaKnown RBP27.08■■□□□ 1.93
ERCC2-212ENST00000591309 ARXQ96QS3 562 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms