RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MSH5O43196 834 aa18.69■□□□□ 0.58
SCAMP4-212ENST00000590266 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
SCAMP4-212ENST00000590266 PRKRIP1Q9H875 184 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-212ENST00000590266 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
SCAMP4-212ENST00000590266 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
SCAMP4-212ENST00000590266 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-212ENST00000590266 NEFMP07197 916 aa18.68■□□□□ 0.58
SCAMP4-212ENST00000590266 SLC52A2Q9HAB3 445 aa18.68■□□□□ 0.58
SCAMP4-212ENST00000590266 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-212ENST00000590266 AK7Q96M32 723 aa18.67■□□□□ 0.58
SCAMP4-212ENST00000590266 ITGB4P16144 1822 aa18.66■□□□□ 0.58
SCAMP4-212ENST00000590266 ITPK1Q13572 414 aa18.66■□□□□ 0.58
SCAMP4-212ENST00000590266 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
SCAMP4-212ENST00000590266 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
SCAMP4-212ENST00000590266 LY75O60449 1722 aa18.66■□□□□ 0.58
SCAMP4-212ENST00000590266 TEFQ10587 303 aa18.65■□□□□ 0.58
SCAMP4-212ENST00000590266 SLC39A6Q13433 755 aa18.65■□□□□ 0.58
SCAMP4-212ENST00000590266 PHF14O94880 888 aa18.64■□□□□ 0.57
SCAMP4-212ENST00000590266 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
SCAMP4-212ENST00000590266 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-212ENST00000590266 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
SCAMP4-212ENST00000590266 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
SCAMP4-212ENST00000590266 SLC4A9Q96Q91 983 aa18.63■□□□□ 0.57
SCAMP4-212ENST00000590266 MTFR1LQ9H019 292 aa18.63■□□□□ 0.57
SCAMP4-212ENST00000590266 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
SCAMP4-212ENST00000590266 HMGB2P26583 209 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-212ENST00000590266 MCM10Q7L590 875 aa18.62■□□□□ 0.57
SCAMP4-212ENST00000590266 GNPATO15228 680 aa18.61■□□□□ 0.57
SCAMP4-212ENST00000590266 DCTN1Q14203 1278 aa18.61■□□□□ 0.57
SCAMP4-212ENST00000590266 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-212ENST00000590266 MRC1P22897 1456 aa18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 COL23A1Q86Y22 540 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 C5P01031 1676 aa18.6■□□□□ 0.57
SCAMP4-212ENST00000590266 AMIGO3Q86WK7 504 aa18.59■□□□□ 0.57
SCAMP4-212ENST00000590266 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
SCAMP4-212ENST00000590266 ANP32CO43423 234 aa18.58■□□□□ 0.56
SCAMP4-212ENST00000590266 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
SCAMP4-212ENST00000590266 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
SCAMP4-212ENST00000590266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-212ENST00000590266 PTGER2P43116 358 aa18.57■□□□□ 0.56
SCAMP4-212ENST00000590266 NFE2L2Q16236 605 aa18.57■□□□□ 0.56
SCAMP4-212ENST00000590266 SCN11AQ9UI33 1791 aa18.57■□□□□ 0.56
SCAMP4-212ENST00000590266 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
SCAMP4-212ENST00000590266 YY1P25490 414 aa18.56■□□□□ 0.56
SCAMP4-212ENST00000590266 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
SCAMP4-212ENST00000590266 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
SCAMP4-212ENST00000590266 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
SCAMP4-212ENST00000590266 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
SCAMP4-212ENST00000590266 ARXQ96QS3 562 aa18.55■□□□□ 0.56
SCAMP4-212ENST00000590266 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-212ENST00000590266 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 SSFA2P28290 1259 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 POLD1P28340 1107 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-212ENST00000590266 HTATSF1O43719 755 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-212ENST00000590266 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SCAMP4-212ENST00000590266 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-212ENST00000590266 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 KCNQ3O43525 872 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 RIPK4P57078 832 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 SYT17Q9BSW7 474 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 KCPQ6ZWJ8 1503 aa18.52■□□□□ 0.56
SCAMP4-212ENST00000590266 TRAPPC3LQ5T215 181 aa18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 SGIP1Q9BQI5 828 aa18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
SCAMP4-212ENST00000590266 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
SCAMP4-212ENST00000590266 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
SCAMP4-212ENST00000590266 CCDC87Q9NVE4 849 aa18.5■□□□□ 0.55
SCAMP4-212ENST00000590266 TAF1LQ8IZX4 1826 aa18.5■□□□□ 0.55
SCAMP4-212ENST00000590266 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-212ENST00000590266 RFC4P35249 363 aa18.49■□□□□ 0.55
SCAMP4-212ENST00000590266 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-212ENST00000590266 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
SCAMP4-212ENST00000590266 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
SCAMP4-212ENST00000590266 INTS5Q6P9B9 1019 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-212ENST00000590266 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
SCAMP4-212ENST00000590266 ARHGEF1Q92888 912 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-212ENST00000590266 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
SCAMP4-212ENST00000590266 QSER1Q2KHR3 1735 aa18.47■□□□□ 0.55
SCAMP4-212ENST00000590266 STARD3NLO95772 234 aa18.47■□□□□ 0.55
SCAMP4-212ENST00000590266 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-212ENST00000590266 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
SCAMP4-212ENST00000590266 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
SCAMP4-212ENST00000590266 TJP1Q07157 1748 aa18.46■□□□□ 0.55
SCAMP4-212ENST00000590266 ADRA2BP18089 450 aa18.46■□□□□ 0.55
SCAMP4-212ENST00000590266 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
SCAMP4-212ENST00000590266 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms