RNA–Protein interactions for RNA: ENST00000589999.1

AC005394.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC005394.1, Length 1,269 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005394.1-201ENST00000589999 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
AC005394.1-201ENST00000589999 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
AC005394.1-201ENST00000589999 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
AC005394.1-201ENST00000589999 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
AC005394.1-201ENST00000589999 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
AC005394.1-201ENST00000589999 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
AC005394.1-201ENST00000589999 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
AC005394.1-201ENST00000589999 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
AC005394.1-201ENST00000589999 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
AC005394.1-201ENST00000589999 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
AC005394.1-201ENST00000589999 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
AC005394.1-201ENST00000589999 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
AC005394.1-201ENST00000589999 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
AC005394.1-201ENST00000589999 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
AC005394.1-201ENST00000589999 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
AC005394.1-201ENST00000589999 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
AC005394.1-201ENST00000589999 PIGBQ92521 554 aa13.09□□□□□ -0.31
AC005394.1-201ENST00000589999 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
AC005394.1-201ENST00000589999 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
AC005394.1-201ENST00000589999 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
AC005394.1-201ENST00000589999 HOXB7P09629 217 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 HEG1Q9ULI3 1381 aa13.06□□□□□ -0.32
AC005394.1-201ENST00000589999 KCNQ2O43526 872 aa13.05□□□□□ -0.32
AC005394.1-201ENST00000589999 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
AC005394.1-201ENST00000589999 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
AC005394.1-201ENST00000589999 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
AC005394.1-201ENST00000589999 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
AC005394.1-201ENST00000589999 ITGB4P16144 1822 aa13.04□□□□□ -0.32
AC005394.1-201ENST00000589999 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
AC005394.1-201ENST00000589999 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
AC005394.1-201ENST00000589999 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
AC005394.1-201ENST00000589999 KCNQ3O43525 872 aa13.03□□□□□ -0.32
AC005394.1-201ENST00000589999 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
AC005394.1-201ENST00000589999 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
AC005394.1-201ENST00000589999 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
AC005394.1-201ENST00000589999 UBR2Q8IWV8 1755 aa13.02□□□□□ -0.32
AC005394.1-201ENST00000589999 VAMP4O75379 141 aa13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 GIGYF1O75420 1035 aaPredicted RBP13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
AC005394.1-201ENST00000589999 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
AC005394.1-201ENST00000589999 TRIM37O94972 964 aa13□□□□□ -0.33
AC005394.1-201ENST00000589999 KRT24Q2M2I5 525 aa13□□□□□ -0.33
AC005394.1-201ENST00000589999 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
AC005394.1-201ENST00000589999 TSPYL6Q8N831 410 aa13□□□□□ -0.33
AC005394.1-201ENST00000589999 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 PLSCR1O15162 318 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 SIK1P57059 783 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 BTAF1O14981 1849 aa12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
AC005394.1-201ENST00000589999 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
AC005394.1-201ENST00000589999 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
AC005394.1-201ENST00000589999 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
AC005394.1-201ENST00000589999 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
AC005394.1-201ENST00000589999 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
AC005394.1-201ENST00000589999 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
AC005394.1-201ENST00000589999 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
AC005394.1-201ENST00000589999 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
AC005394.1-201ENST00000589999 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
AC005394.1-201ENST00000589999 STARD3NLO95772 234 aa12.96□□□□□ -0.33
AC005394.1-201ENST00000589999 ATP6V1AP38606 617 aa12.96□□□□□ -0.33
AC005394.1-201ENST00000589999 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.33
AC005394.1-201ENST00000589999 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
AC005394.1-201ENST00000589999 EP400Q96L91 3159 aa12.96□□□□□ -0.33
AC005394.1-201ENST00000589999 APBA3O96018 575 aa12.95□□□□□ -0.34
AC005394.1-201ENST00000589999 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
AC005394.1-201ENST00000589999 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
AC005394.1-201ENST00000589999 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
AC005394.1-201ENST00000589999 USP16Q9Y5T5 823 aa12.95□□□□□ -0.34
AC005394.1-201ENST00000589999 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 LY75O60449 1722 aa12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 DDX21Q9NR30 783 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
AC005394.1-201ENST00000589999 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms