RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	USHBP1	Q8N6Y0	703 aa		33.14	■■■□□ 2.9
CIRBP-223	ENST00000589266	TUBGCP6	Q96RT7	1819 aa		33.13	■■■□□ 2.89
CIRBP-223	ENST00000589266	SHANK3	Q9BYB0	1731 aa		33.11	■■■□□ 2.89
CIRBP-223	ENST00000589266	RAPGEF4	Q8WZA2	1011 aa		33.11	■■■□□ 2.89
CIRBP-223	ENST00000589266	MAPK8IP3	Q9UPT6	1336 aa		33.1	■■■□□ 2.89
CIRBP-223	ENST00000589266	MSH5	O43196	834 aa		33.08	■■■□□ 2.89
CIRBP-223	ENST00000589266	YBX3	P16989	372 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
CIRBP-223	ENST00000589266	LY75	O60449	1722 aa		33.08	■■■□□ 2.89
CIRBP-223	ENST00000589266	TAT	P17735	454 aa	Predicted RBP	33.07	■■■□□ 2.88
CIRBP-223	ENST00000589266	NCBP3	Q53F19	620 aa	Known RBP	33.07	■■■□□ 2.88
CIRBP-223	ENST00000589266	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.07	■■■□□ 2.88	4e-13	■□□□□ 8.8
CIRBP-223	ENST00000589266	CCNL1	Q9UK58	526 aa	Predicted RBP	33.07	■■■□□ 2.88
CIRBP-223	ENST00000589266	AMOT	Q4VCS5	1084 aa		33.06	■■■□□ 2.88
CIRBP-223	ENST00000589266	CCDC146	Q8IYE0	955 aa		33.06	■■■□□ 2.88
CIRBP-223	ENST00000589266	NGEF	Q8N5V2	710 aa		33.06	■■■□□ 2.88
CIRBP-223	ENST00000589266	ZCRB1	Q8TBF4	217 aa	Known RBP	33.05	■■■□□ 2.88
CIRBP-223	ENST00000589266	MEGF6	O75095	1541 aa		33.04	■■■□□ 2.88
CIRBP-223	ENST00000589266	COL23A1	Q86Y22	540 aa	Predicted RBP	33.04	■■■□□ 2.88
CIRBP-223	ENST00000589266	DOT1L	Q8TEK3	1739 aa		33.04	■■■□□ 2.88
CIRBP-223	ENST00000589266	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.03	■■■□□ 2.88
CIRBP-223	ENST00000589266	PHACTR3	Q96KR7	559 aa		33.03	■■■□□ 2.88
CIRBP-223	ENST00000589266	GAS2L2	Q8NHY3	880 aa		33.02	■■■□□ 2.88
CIRBP-223	ENST00000589266	APAF1	O14727	1248 aa		33	■■■□□ 2.87
CIRBP-223	ENST00000589266	PKD1L3	Q7Z443	1732 aa		32.99	■■■□□ 2.87
CIRBP-223	ENST00000589266	SPG7	Q9UQ90	795 aa		32.99	■■■□□ 2.87
CIRBP-223	ENST00000589266	NFE2L2	Q16236	605 aa		32.98	■■■□□ 2.87
CIRBP-223	ENST00000589266	ATP10D	Q9P241	1426 aa		32.97	■■■□□ 2.87
CIRBP-223	ENST00000589266	TMPO	P42166	694 aa	Known RBP	32.97	■■■□□ 2.87
CIRBP-223	ENST00000589266	MSL1	Q68DK7	614 aa		32.97	■■■□□ 2.87
CIRBP-223	ENST00000589266	MTHFSD	Q2M296	383 aa	Known RBP	32.96	■■■□□ 2.87
CIRBP-223	ENST00000589266	CD2AP	Q9Y5K6	639 aa		32.95	■■■□□ 2.87
CIRBP-223	ENST00000589266	HMGB2	P26583	209 aa	Known RBP	32.94	■■■□□ 2.86
CIRBP-223	ENST00000589266	CCDC27	Q2M243	656 aa		32.93	■■■□□ 2.86
CIRBP-223	ENST00000589266	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.93	■■■□□ 2.86
CIRBP-223	ENST00000589266	HTATSF1	O43719	755 aa	Known RBP	32.91	■■■□□ 2.86
CIRBP-223	ENST00000589266	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
CIRBP-223	ENST00000589266	LMOD3	Q0VAK6	560 aa		32.91	■■■□□ 2.86
CIRBP-223	ENST00000589266	FLAD1	Q8NFF5	587 aa		32.91	■■■□□ 2.86
CIRBP-223	ENST00000589266	PCDH11X	Q9BZA7	1347 aa		32.9	■■■□□ 2.86
CIRBP-223	ENST00000589266	PCDH11Y	Q9BZA8	1340 aa		32.9	■■■□□ 2.86
CIRBP-223	ENST00000589266	RIPK4	P57078	832 aa		32.89	■■■□□ 2.86
CIRBP-223	ENST00000589266	AKAP4	Q5JQC9	854 aa		32.89	■■■□□ 2.86
CIRBP-223	ENST00000589266	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.89	■■■□□ 2.86
CIRBP-223	ENST00000589266	DLG5	Q8TDM6	1919 aa		32.87	■■■□□ 2.85
CIRBP-223	ENST00000589266	IFNL2	Q8IZJ0	200 aa		32.87	■■■□□ 2.85
CIRBP-223	ENST00000589266	GNAT3	A8MTJ3	354 aa		32.86	■■■□□ 2.85
CIRBP-223	ENST00000589266	C1orf141	Q5JVX7	400 aa		32.86	■■■□□ 2.85
CIRBP-223	ENST00000589266	RRP7A	Q9Y3A4	280 aa	Known RBP	32.85	■■■□□ 2.85
CIRBP-223	ENST00000589266	C5	P01031	1676 aa		32.85	■■■□□ 2.85
CIRBP-223	ENST00000589266	ZBED9	Q6R2W3	1325 aa		32.84	■■■□□ 2.85
CIRBP-223	ENST00000589266	HSP90AB1	P08238	724 aa	Known RBP	32.84	■■■□□ 2.85
CIRBP-223	ENST00000589266	HSPA6	P17066	643 aa		32.84	■■■□□ 2.85
CIRBP-223	ENST00000589266	PHKG2	P15735	406 aa		32.83	■■■□□ 2.85
CIRBP-223	ENST00000589266	NEUROD2	Q15784	382 aa		32.83	■■■□□ 2.85
CIRBP-223	ENST00000589266	CYP27B1	O15528	508 aa		32.82	■■■□□ 2.84
CIRBP-223	ENST00000589266	TRIM35	Q9UPQ4	493 aa		32.82	■■■□□ 2.84
CIRBP-223	ENST00000589266	ADCY9	O60503	1353 aa		32.82	■■■□□ 2.84
CIRBP-223	ENST00000589266	NKX1-1	Q15270	411 aa	Predicted RBP	32.81	■■■□□ 2.84
CIRBP-223	ENST00000589266	ZNF526	Q8TF50	670 aa	Predicted RBP	32.81	■■■□□ 2.84
CIRBP-223	ENST00000589266	RTF1	Q92541	710 aa	Known RBP	32.81	■■■□□ 2.84
CIRBP-223	ENST00000589266	WWC1	Q8IX03	1113 aa		32.8	■■■□□ 2.84
CIRBP-223	ENST00000589266	PALLD	Q8WX93	1383 aa		32.8	■■■□□ 2.84
CIRBP-223	ENST00000589266	ZNF521	Q96K83	1311 aa		32.79	■■■□□ 2.84
CIRBP-223	ENST00000589266	TAF1L	Q8IZX4	1826 aa		32.79	■■■□□ 2.84
CIRBP-223	ENST00000589266	ADAMTS7	Q9UKP4	1686 aa		32.78	■■■□□ 2.84
CIRBP-223	ENST00000589266	MPRIP	Q6WCQ1	1025 aa		32.78	■■■□□ 2.84
CIRBP-223	ENST00000589266	CALD1	Q05682	793 aa	Known RBP	32.77	■■■□□ 2.84
CIRBP-223	ENST00000589266	WDR63	Q8IWG1	891 aa		32.77	■■■□□ 2.84
CIRBP-223	ENST00000589266	YTHDC1	Q96MU7	727 aa	Known RBP	32.77	■■■□□ 2.84
CIRBP-223	ENST00000589266	DCAF5	Q96JK2	942 aa		32.76	■■■□□ 2.83
CIRBP-223	ENST00000589266	AK7	Q96M32	723 aa		32.75	■■■□□ 2.83
CIRBP-223	ENST00000589266	SALL2	Q9Y467	1007 aa	Predicted RBP	32.75	■■■□□ 2.83
CIRBP-223	ENST00000589266	CEMIP	Q8WUJ3	1361 aa		32.74	■■■□□ 2.83
CIRBP-223	ENST00000589266	SMARCC1	Q92922	1105 aa	Predicted RBP	32.74	■■■□□ 2.83
CIRBP-223	ENST00000589266	IL17RE	Q8NFR9	667 aa		32.72	■■■□□ 2.83
CIRBP-223	ENST00000589266	SCN11A	Q9UI33	1791 aa		32.72	■■■□□ 2.83
CIRBP-223	ENST00000589266	IL16	Q14005	1332 aa		32.72	■■■□□ 2.83
CIRBP-223	ENST00000589266	C4B	P0C0L5	1744 aa		32.71	■■■□□ 2.83
CIRBP-223	ENST00000589266	RNMT	O43148	476 aa	Known RBP	32.71	■■■□□ 2.83
CIRBP-223	ENST00000589266	KDM6A	O15550	1401 aa	Predicted RBP	32.7	■■■□□ 2.83
CIRBP-223	ENST00000589266	WWC3	Q9ULE0	1092 aa		32.7	■■■□□ 2.83
CIRBP-223	ENST00000589266	PHF14	O94880	888 aa		32.69	■■■□□ 2.82
CIRBP-223	ENST00000589266	MCM10	Q7L590	875 aa		32.69	■■■□□ 2.82
CIRBP-223	ENST00000589266	VIRMA	Q69YN4	1812 aa	Known RBP	32.69	■■■□□ 2.82
CIRBP-223	ENST00000589266	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.68	■■■□□ 2.82
CIRBP-223	ENST00000589266	AMIGO3	Q86WK7	504 aa		32.68	■■■□□ 2.82
CIRBP-223	ENST00000589266	ERVV-2	B6SEH9	535 aa		32.67	■■■□□ 2.82
CIRBP-223	ENST00000589266	GOLGA2	Q08379	1002 aa		32.67	■■■□□ 2.82
CIRBP-223	ENST00000589266	DCTN1	Q14203	1278 aa		32.67	■■■□□ 2.82
CIRBP-223	ENST00000589266	LGR6	Q9HBX8	967 aa		32.66	■■■□□ 2.82
CIRBP-223	ENST00000589266	MRC1	P22897	1456 aa		32.66	■■■□□ 2.82
CIRBP-223	ENST00000589266	ITGB4	P16144	1822 aa		32.65	■■■□□ 2.82
CIRBP-223	ENST00000589266	UBR3	Q6ZT12	1888 aa		32.65	■■■□□ 2.82
CIRBP-223	ENST00000589266	BABAM1	Q9NWV8	329 aa		32.65	■■■□□ 2.82
CIRBP-223	ENST00000589266	KIF3C	O14782	793 aa		32.64	■■■□□ 2.82
CIRBP-223	ENST00000589266	SSFA2	P28290	1259 aa		32.64	■■■□□ 2.82
CIRBP-223	ENST00000589266	TOGARAM1	Q9Y4F4	1720 aa		32.64	■■■□□ 2.82
CIRBP-223	ENST00000589266	TEF	Q10587	303 aa		32.63	■■■□□ 2.81
CIRBP-223	ENST00000589266	SMIM5	Q71RC9	77 aa		32.63	■■■□□ 2.81
CIRBP-223	ENST00000589266	PIGB	Q92521	554 aa		32.63	■■■□□ 2.81

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