RNA–Protein interactions for RNA: ENST00000588734.5

TK1-203, Transcript of thymidine kinase 1, humanhuman

TSL 2 BASIC

Gene TK1, Length 1,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK1-203ENST00000588734 UPF1Q92900 1129 aaKnown RBP eCLIP20.38■□□□□ 0.854e-18■■■■■ 33.1
TK1-203ENST00000588734 SLC52A2Q9HAB3 445 aa20.38■□□□□ 0.85
TK1-203ENST00000588734 CABP4P57796 275 aa20.38■□□□□ 0.85
TK1-203ENST00000588734 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
TK1-203ENST00000588734 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
TK1-203ENST00000588734 CHL1O00533 1208 aa20.37■□□□□ 0.85
TK1-203ENST00000588734 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
TK1-203ENST00000588734 NFATC2IPQ8NCF5 419 aa20.37■□□□□ 0.85
TK1-203ENST00000588734 MRC1P22897 1456 aa20.34■□□□□ 0.85
TK1-203ENST00000588734 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
TK1-203ENST00000588734 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
TK1-203ENST00000588734 BCL9O00512 1426 aa20.34■□□□□ 0.85
TK1-203ENST00000588734 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
TK1-203ENST00000588734 TMOD3Q9NYL9 352 aa20.33■□□□□ 0.85
TK1-203ENST00000588734 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
TK1-203ENST00000588734 KAT6BQ8WYB5 2073 aa20.32■□□□□ 0.84
TK1-203ENST00000588734 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
TK1-203ENST00000588734 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
TK1-203ENST00000588734 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
TK1-203ENST00000588734 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
TK1-203ENST00000588734 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
TK1-203ENST00000588734 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
TK1-203ENST00000588734 TOGARAM1Q9Y4F4 1720 aa20.31■□□□□ 0.84
TK1-203ENST00000588734 SYTL4Q96C24 671 aaPredicted RBP20.3■□□□□ 0.84
TK1-203ENST00000588734 PIGBQ92521 554 aa20.29■□□□□ 0.84
TK1-203ENST00000588734 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
TK1-203ENST00000588734 ITGB4P16144 1822 aa20.29■□□□□ 0.84
TK1-203ENST00000588734 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
TK1-203ENST00000588734 DOT1LQ8TEK3 1739 aa20.28■□□□□ 0.84
TK1-203ENST00000588734 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
TK1-203ENST00000588734 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
TK1-203ENST00000588734 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
TK1-203ENST00000588734 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
TK1-203ENST00000588734 KDM3BQ7LBC6 1761 aa20.25■□□□□ 0.83
TK1-203ENST00000588734 KCNQ2O43526 872 aa20.25■□□□□ 0.83
TK1-203ENST00000588734 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
TK1-203ENST00000588734 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
TK1-203ENST00000588734 KCNQ3O43525 872 aa20.23■□□□□ 0.83
TK1-203ENST00000588734 TNS1Q9HBL0 1735 aaKnown RBP20.23■□□□□ 0.83
TK1-203ENST00000588734 TRIM37O94972 964 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
TK1-203ENST00000588734 ATG3Q9NT62 314 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 ASAP1Q9ULH1 1129 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
TK1-203ENST00000588734 SBF2Q86WG5 1849 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
TK1-203ENST00000588734 NHSQ6T4R5 1651 aa20.21■□□□□ 0.83
TK1-203ENST00000588734 TWISTNBQ3B726 338 aaPredicted RBP20.21■□□□□ 0.83
TK1-203ENST00000588734 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
TK1-203ENST00000588734 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.82
TK1-203ENST00000588734 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
TK1-203ENST00000588734 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
TK1-203ENST00000588734 ZNF496Q96IT1 587 aaPredicted RBP20.2■□□□□ 0.82
TK1-203ENST00000588734 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
TK1-203ENST00000588734 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
TK1-203ENST00000588734 HOXB7P09629 217 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 PAPPAQ13219 1627 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 VAMP4O75379 141 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 KRT24Q2M2I5 525 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
TK1-203ENST00000588734 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
TK1-203ENST00000588734 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
TK1-203ENST00000588734 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
TK1-203ENST00000588734 PTCD1O75127 700 aaKnown RBP20.17■□□□□ 0.82
TK1-203ENST00000588734 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
TK1-203ENST00000588734 VSIG10Q8N0Z9 540 aa20.17■□□□□ 0.82
TK1-203ENST00000588734 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
TK1-203ENST00000588734 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
TK1-203ENST00000588734 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
TK1-203ENST00000588734 KCPQ6ZWJ8 1503 aa20.16■□□□□ 0.82
TK1-203ENST00000588734 BTAF1O14981 1849 aa20.15■□□□□ 0.82
TK1-203ENST00000588734 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
TK1-203ENST00000588734 PALLDQ8WX93 1383 aa20.14■□□□□ 0.82
TK1-203ENST00000588734 APBA3O96018 575 aa20.13■□□□□ 0.81
TK1-203ENST00000588734 EN1Q05925 392 aaPredicted RBP20.13■□□□□ 0.81
TK1-203ENST00000588734 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
TK1-203ENST00000588734 CCDC30Q5VVM6 783 aa20.13■□□□□ 0.81
TK1-203ENST00000588734 LOC102724428A0A0B4J2F2 783 aa20.12■□□□□ 0.81
TK1-203ENST00000588734 BAG6P46379 1132 aa20.12■□□□□ 0.81
TK1-203ENST00000588734 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
TK1-203ENST00000588734 SIK1P57059 783 aa20.12■□□□□ 0.81
TK1-203ENST00000588734 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
TK1-203ENST00000588734 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
TK1-203ENST00000588734 EIF2S2P20042 333 aaKnown RBP20.1■□□□□ 0.81
TK1-203ENST00000588734 ATP6V1AP38606 617 aa20.1■□□□□ 0.81
TK1-203ENST00000588734 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
TK1-203ENST00000588734 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
TK1-203ENST00000588734 PLSCR1O15162 318 aa20.09■□□□□ 0.81
TK1-203ENST00000588734 STARD3NLO95772 234 aa20.09■□□□□ 0.81
TK1-203ENST00000588734 SSH1Q8WYL5 1049 aa20.09■□□□□ 0.81
TK1-203ENST00000588734 STK31Q9BXU1 1019 aa20.09■□□□□ 0.81
TK1-203ENST00000588734 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
TK1-203ENST00000588734 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
TK1-203ENST00000588734 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.81
TK1-203ENST00000588734 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
TK1-203ENST00000588734 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
TK1-203ENST00000588734 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
TK1-203ENST00000588734 C5P01031 1676 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms